data_1PY2 # _model_server_result.job_id k5jILBk5QDx_v5EScbtPcw _model_server_result.datetime_utc '2024-10-18 16:23:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1py2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 1PY2 # _exptl.entry_id 1PY2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 662.564 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[2,3-DICHLORO-4-(5-{1-[2-(2-GUANIDINO-4-METHYL-PENTANOYLAMINO)-ACETYL]-PIPERIDIN-4-YL}-1-METHYL-1H-PYRAZOL-3-YL)-PHENOXYMETHYL]-FURAN-2-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.34 _cell.angle_gamma 90 _cell.entry_id 1PY2 _cell.length_a 59.982 _cell.length_b 52.448 _cell.length_c 89.469 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PY2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 PQS monomeric 1 author_and_software_defined_assembly 3 PQS monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 software_defined_assembly 5 PISA monomeric 1 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,F,G,H 2 1 C,I,J 3 1 D,K 4 1 C,I,J 5 1 B,F,G,H 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 58 A CYS 58 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 58 B CYS 58 1_555 B SG CYS 105 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 58 C CYS 58 1_555 C SG CYS 105 C CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? disulf ? disulf4 D SG CYS 58 D CYS 58 1_555 D SG CYS 105 D CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 F ZN ZN . B ZN 601 1_555 B NE2 HIS 16 B HIS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc2 F ZN ZN . B ZN 601 1_555 B OD1 ASP 20 B ASP 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc3 G ZN ZN . B ZN 801 1_555 B OE1 GLU 15 B GLU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc4 G ZN ZN . B ZN 801 1_555 B OE2 GLU 15 B GLU 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc5 I ZN ZN . C ZN 701 1_555 C NE2 HIS 16 C HIS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc6 F ZN ZN . B ZN 601 1_555 D NE2 HIS 16 D HIS 16 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? # _chem_comp.formula 'C30 H37 Cl2 N7 O6' _chem_comp.formula_weight 662.564 _chem_comp.id FRH _chem_comp.mon_nstd_flag . _chem_comp.name '5-[2,3-DICHLORO-4-(5-{1-[2-(2-GUANIDINO-4-METHYL-PENTANOYLAMINO)-ACETYL]-PIPERIDIN-4-YL}-1-METHYL-1H-PYRAZOL-3-YL)-PHENOXYMETHYL]-FURAN-2-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1PY2 _atom_sites.fract_transf_matrix[1][1] 0.016672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004888 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FRH A 1 201 1 FRH FRG . F 3 ZN B 1 601 1 ZN ZN . G 3 ZN B 1 801 1 ZN ZN . H 2 FRH B 1 301 1 FRH FRG . I 3 ZN C 1 701 1 ZN ZN . J 2 FRH C 1 401 1 FRH FRG . K 2 FRH D 1 501 1 FRH FRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O45 FRH . . . E 2 32.968 9.661 -1.913 1 38.81 ? O45 FRH 201 A 1 HETATM 2 C C26 FRH . . . E 2 31.885 9.975 -1.44 1 39.14 ? C26 FRH 201 A 1 HETATM 3 C C25 FRH . . . E 2 30.621 9.741 -2.219 1 41.44 ? C25 FRH 201 A 1 HETATM 4 C C32 FRH . . . E 2 30.559 10.621 -3.465 1 38.64 ? C32 FRH 201 A 1 HETATM 5 C C36 FRH . . . E 2 29.883 11.967 -3.219 1 37.5 ? C36 FRH 201 A 1 HETATM 6 C C38 FRH . . . E 2 28.368 11.841 -3.105 1 42.75 ? C38 FRH 201 A 1 HETATM 7 C C37 FRH . . . E 2 30.246 12.952 -4.323 1 35.14 ? C37 FRH 201 A 1 HETATM 8 N N5 FRH . . . E 2 30.514 8.35 -2.609 1 47.54 ? N5 FRH 201 A 1 HETATM 9 C C17 FRH . . . E 2 29.382 7.664 -2.507 1 55.22 ? C17 FRH 201 A 1 HETATM 10 N N4 FRH . . . E 2 28.653 7.726 -1.393 1 57.77 ? N4 FRH 201 A 1 HETATM 11 N N1 FRH . . . E 2 28.984 6.908 -3.528 1 62.89 ? N1 FRH 201 A 1 HETATM 12 N N2 FRH . . . E 2 31.732 10.524 -0.233 1 38.85 ? N2 FRH 201 A 1 HETATM 13 C C28 FRH . . . E 2 32.747 10.486 0.808 1 38.65 ? C28 FRH 201 A 1 HETATM 14 C C14 FRH . . . E 2 32.695 11.726 1.675 1 40.1 ? C14 FRH 201 A 1 HETATM 15 O O44 FRH . . . E 2 31.65 12.356 1.74 1 42.2 ? O44 FRH 201 A 1 HETATM 16 N N6 FRH . . . E 2 33.802 12.099 2.336 1 42.29 ? N6 FRH 201 A 1 HETATM 17 C C22 FRH . . . E 2 33.844 13.352 3.099 1 45.84 ? C22 FRH 201 A 1 HETATM 18 C C15 FRH . . . E 2 34.167 12.997 4.552 1 48.36 ? C15 FRH 201 A 1 HETATM 19 C C19 FRH . . . E 2 35.497 12.248 4.622 1 49.85 ? C19 FRH 201 A 1 HETATM 20 C C27 FRH . . . E 2 35.377 10.976 3.783 1 45.59 ? C27 FRH 201 A 1 HETATM 21 C C29 FRH . . . E 2 35.041 11.314 2.33 1 43.19 ? C29 FRH 201 A 1 HETATM 22 C C23 FRH . . . E 2 35.903 11.919 6.04 1 53.73 ? C23 FRH 201 A 1 HETATM 23 C C11 FRH . . . E 2 35.261 11.804 7.129 1 54.41 ? C11 FRH 201 A 1 HETATM 24 C C13 FRH . . . E 2 36.02 11.488 8.102 1 58.43 ? C13 FRH 201 A 1 HETATM 25 N N7 FRH . . . E 2 37.234 11.232 7.619 1 60.15 ? N7 FRH 201 A 1 HETATM 26 N N3 FRH . . . E 2 37.157 11.668 6.395 1 57.98 ? N3 FRH 201 A 1 HETATM 27 C C34 FRH . . . E 2 38.383 11.828 5.623 1 61.72 ? C34 FRH 201 A 1 HETATM 28 C C24 FRH . . . E 2 35.784 11.379 9.585 1 62.27 ? C24 FRH 201 A 1 HETATM 29 C C10 FRH . . . E 2 36.753 11.885 10.452 1 70.01 ? C10 FRH 201 A 1 HETATM 30 C C21 FRH . . . E 2 34.64 10.781 10.11 1 60.02 ? C21 FRH 201 A 1 HETATM 31 CL CL8 FRH . . . E 2 33.363 10.11 9.043 1 55.65 ? CL8 FRH 201 A 1 HETATM 32 C C16 FRH . . . E 2 34.469 10.699 11.485 1 63.61 ? C16 FRH 201 A 1 HETATM 33 CL CL9 FRH . . . E 2 32.991 9.931 12.157 1 63.28 ? CL9 FRH 201 A 1 HETATM 34 C C30 FRH . . . E 2 35.432 11.201 12.349 1 69.68 ? C30 FRH 201 A 1 HETATM 35 C C33 FRH . . . E 2 36.58 11.801 11.831 1 73.33 ? C33 FRH 201 A 1 HETATM 36 O O43 FRH . . . E 2 35.231 11.105 13.704 1 74.03 ? O43 FRH 201 A 1 HETATM 37 C C35 FRH . . . E 2 36.29 10.801 14.613 1 79.91 ? C35 FRH 201 A 1 HETATM 38 C C18 FRH . . . E 2 36.356 11.9 15.646 1 89.9 ? C18 FRH 201 A 1 HETATM 39 C C39 FRH . . . E 2 36.762 11.796 16.838 1 95.82 ? C39 FRH 201 A 1 HETATM 40 O O42 FRH . . . E 2 35.95 13.272 15.455 1 96.66 ? O42 FRH 201 A 1 HETATM 41 C C31 FRH . . . E 2 35.868 13.758 16.807 1 106.13 ? C31 FRH 201 A 1 HETATM 42 C C12 FRH . . . E 2 36.386 12.772 17.561 1 104.09 ? C12 FRH 201 A 1 HETATM 43 C C20 FRH . . . E 2 35.322 15.04 17.249 1 116.98 ? C20 FRH 201 A 1 HETATM 44 O O40 FRH . . . E 2 34.61 15.692 16.454 1 116.65 ? O40 FRH 201 A 1 HETATM 45 O O41 FRH . . . E 2 35.577 15.455 18.402 1 127.56 ? O41 FRH 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 45 #