data_1PY3 # _model_server_result.job_id qUw_lVb8pLoU7LNLX7eloA _model_server_result.datetime_utc '2024-11-28 18:09:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1py3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1PY3 # _exptl.entry_id 1PY3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.4 _cell.angle_gamma 90 _cell.entry_id 1PY3 _cell.length_a 102.29 _cell.length_b 68.7 _cell.length_c 57.51 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PY3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E 1 1 B,F 2 1 C,G 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 97 A CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 B SG CYS 9 B CYS 9 1_555 B SG CYS 97 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf3 C SG CYS 9 C CYS 9 1_555 C SG CYS 97 C CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 271 n n S O2 SO4 doub 272 n n S O3 SO4 sing 273 n n S O4 SO4 sing 274 n n # _atom_sites.entry_id 1PY3 _atom_sites.fract_transf_matrix[1][1] 0.009776 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001794 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 300 98 SO4 SO4 . E 3 HOH A 1 301 1 HOH HOH . E 3 HOH A 2 302 2 HOH HOH . E 3 HOH A 3 303 3 HOH HOH . E 3 HOH A 4 304 4 HOH HOH . E 3 HOH A 5 305 5 HOH HOH . E 3 HOH A 6 306 8 HOH HOH . E 3 HOH A 7 307 10 HOH HOH . E 3 HOH A 8 308 11 HOH HOH . E 3 HOH A 9 309 12 HOH HOH . E 3 HOH A 10 310 14 HOH HOH . E 3 HOH A 11 311 19 HOH HOH . E 3 HOH A 12 312 21 HOH HOH . E 3 HOH A 13 313 24 HOH HOH . E 3 HOH A 14 314 27 HOH HOH . E 3 HOH A 15 315 30 HOH HOH . E 3 HOH A 16 316 38 HOH HOH . E 3 HOH A 17 317 39 HOH HOH . E 3 HOH A 18 318 43 HOH HOH . E 3 HOH A 19 319 44 HOH HOH . E 3 HOH A 20 320 46 HOH HOH . E 3 HOH A 21 321 47 HOH HOH . E 3 HOH A 22 322 48 HOH HOH . E 3 HOH A 23 323 49 HOH HOH . E 3 HOH A 24 324 50 HOH HOH . E 3 HOH A 25 325 51 HOH HOH . E 3 HOH A 26 326 52 HOH HOH . E 3 HOH A 27 327 54 HOH HOH . E 3 HOH A 28 328 55 HOH HOH . E 3 HOH A 29 329 57 HOH HOH . E 3 HOH A 30 330 58 HOH HOH . E 3 HOH A 31 331 64 HOH HOH . E 3 HOH A 32 332 65 HOH HOH . E 3 HOH A 33 333 68 HOH HOH . E 3 HOH A 34 334 71 HOH HOH . E 3 HOH A 35 335 73 HOH HOH . E 3 HOH A 36 336 74 HOH HOH . E 3 HOH A 37 337 76 HOH HOH . E 3 HOH A 38 338 78 HOH HOH . E 3 HOH A 39 339 79 HOH HOH . E 3 HOH A 40 340 80 HOH HOH . E 3 HOH A 41 341 82 HOH HOH . E 3 HOH A 42 342 84 HOH HOH . E 3 HOH A 43 343 85 HOH HOH . E 3 HOH A 44 344 87 HOH HOH . E 3 HOH A 45 345 89 HOH HOH . E 3 HOH A 46 346 93 HOH HOH . E 3 HOH A 47 347 94 HOH HOH . E 3 HOH A 48 348 99 HOH HOH . E 3 HOH A 49 349 101 HOH HOH . E 3 HOH A 50 350 103 HOH HOH . E 3 HOH A 51 351 110 HOH HOH . E 3 HOH A 52 352 111 HOH HOH . E 3 HOH A 53 353 112 HOH HOH . E 3 HOH A 54 354 113 HOH HOH . E 3 HOH A 55 355 114 HOH HOH . E 3 HOH A 56 356 120 HOH HOH . E 3 HOH A 57 357 121 HOH HOH . E 3 HOH A 58 358 122 HOH HOH . E 3 HOH A 59 359 124 HOH HOH . E 3 HOH A 60 360 130 HOH HOH . E 3 HOH A 61 361 131 HOH HOH . E 3 HOH A 62 362 132 HOH HOH . E 3 HOH A 63 363 133 HOH HOH . E 3 HOH A 64 364 136 HOH HOH . E 3 HOH A 65 365 148 HOH HOH . E 3 HOH A 66 366 150 HOH HOH . E 3 HOH A 67 367 151 HOH HOH . E 3 HOH A 68 368 156 HOH HOH . E 3 HOH A 69 369 157 HOH HOH . E 3 HOH A 70 370 159 HOH HOH . E 3 HOH A 71 371 171 HOH HOH . E 3 HOH A 72 372 177 HOH HOH . E 3 HOH A 73 373 179 HOH HOH . E 3 HOH A 74 374 187 HOH HOH . E 3 HOH A 75 375 191 HOH HOH . E 3 HOH A 76 376 192 HOH HOH . E 3 HOH A 77 377 196 HOH HOH . E 3 HOH A 78 378 204 HOH HOH . E 3 HOH A 79 379 205 HOH HOH . E 3 HOH A 80 380 212 HOH HOH . E 3 HOH A 81 381 213 HOH HOH . E 3 HOH A 82 382 218 HOH HOH . E 3 HOH A 83 383 219 HOH HOH . E 3 HOH A 84 384 220 HOH HOH . E 3 HOH A 85 385 221 HOH HOH . E 3 HOH A 86 386 222 HOH HOH . E 3 HOH A 87 387 223 HOH HOH . E 3 HOH A 88 388 225 HOH HOH . E 3 HOH A 89 389 227 HOH HOH . E 3 HOH A 90 390 228 HOH HOH . E 3 HOH A 91 391 232 HOH HOH . E 3 HOH A 92 392 234 HOH HOH . E 3 HOH A 93 393 236 HOH HOH . E 3 HOH A 94 394 237 HOH HOH . E 3 HOH A 95 395 238 HOH HOH . E 3 HOH A 96 396 243 HOH HOH . E 3 HOH A 97 397 246 HOH HOH . E 3 HOH A 98 398 248 HOH HOH . E 3 HOH A 99 399 249 HOH HOH . E 3 HOH A 100 400 250 HOH HOH . E 3 HOH A 101 401 251 HOH HOH . E 3 HOH A 102 402 253 HOH HOH . E 3 HOH A 103 403 262 HOH HOH . E 3 HOH A 104 404 268 HOH HOH . E 3 HOH A 105 405 270 HOH HOH . E 3 HOH A 106 406 271 HOH HOH . E 3 HOH A 107 407 273 HOH HOH . E 3 HOH A 108 408 276 HOH HOH . E 3 HOH A 109 409 277 HOH HOH . F 3 HOH B 1 98 6 HOH HOH . F 3 HOH B 2 99 9 HOH HOH . F 3 HOH B 3 100 17 HOH HOH . F 3 HOH B 4 101 23 HOH HOH . F 3 HOH B 5 102 25 HOH HOH . F 3 HOH B 6 103 26 HOH HOH . F 3 HOH B 7 104 28 HOH HOH . F 3 HOH B 8 105 29 HOH HOH . F 3 HOH B 9 106 31 HOH HOH . F 3 HOH B 10 107 32 HOH HOH . F 3 HOH B 11 108 35 HOH HOH . F 3 HOH B 12 109 37 HOH HOH . F 3 HOH B 13 110 40 HOH HOH . F 3 HOH B 14 111 42 HOH HOH . F 3 HOH B 15 112 45 HOH HOH . F 3 HOH B 16 113 53 HOH HOH . F 3 HOH B 17 114 56 HOH HOH . F 3 HOH B 18 115 59 HOH HOH . F 3 HOH B 19 116 61 HOH HOH . F 3 HOH B 20 117 62 HOH HOH . F 3 HOH B 21 118 66 HOH HOH . F 3 HOH B 22 119 72 HOH HOH . F 3 HOH B 23 120 77 HOH HOH . F 3 HOH B 24 121 81 HOH HOH . F 3 HOH B 25 122 83 HOH HOH . F 3 HOH B 26 123 86 HOH HOH . F 3 HOH B 27 124 92 HOH HOH . F 3 HOH B 28 125 95 HOH HOH . F 3 HOH B 29 126 98 HOH HOH . F 3 HOH B 30 127 100 HOH HOH . F 3 HOH B 31 128 102 HOH HOH . F 3 HOH B 32 129 104 HOH HOH . F 3 HOH B 33 130 105 HOH HOH . F 3 HOH B 34 131 106 HOH HOH . F 3 HOH B 35 132 108 HOH HOH . F 3 HOH B 36 133 109 HOH HOH . F 3 HOH B 37 134 118 HOH HOH . F 3 HOH B 38 135 119 HOH HOH . F 3 HOH B 39 136 125 HOH HOH . F 3 HOH B 40 137 126 HOH HOH . F 3 HOH B 41 138 138 HOH HOH . F 3 HOH B 42 139 140 HOH HOH . F 3 HOH B 43 140 141 HOH HOH . F 3 HOH B 44 141 142 HOH HOH . F 3 HOH B 45 142 145 HOH HOH . F 3 HOH B 46 143 147 HOH HOH . F 3 HOH B 47 144 152 HOH HOH . F 3 HOH B 48 145 153 HOH HOH . F 3 HOH B 49 146 154 HOH HOH . F 3 HOH B 50 147 155 HOH HOH . F 3 HOH B 51 148 164 HOH HOH . F 3 HOH B 52 149 165 HOH HOH . F 3 HOH B 53 150 167 HOH HOH . F 3 HOH B 54 151 168 HOH HOH . F 3 HOH B 55 152 169 HOH HOH . F 3 HOH B 56 153 172 HOH HOH . F 3 HOH B 57 154 174 HOH HOH . F 3 HOH B 58 155 181 HOH HOH . F 3 HOH B 59 156 186 HOH HOH . F 3 HOH B 60 157 195 HOH HOH . F 3 HOH B 61 158 198 HOH HOH . F 3 HOH B 62 159 199 HOH HOH . F 3 HOH B 63 160 201 HOH HOH . F 3 HOH B 64 161 206 HOH HOH . F 3 HOH B 65 162 207 HOH HOH . F 3 HOH B 66 163 208 HOH HOH . F 3 HOH B 67 164 209 HOH HOH . F 3 HOH B 68 165 216 HOH HOH . F 3 HOH B 69 166 217 HOH HOH . F 3 HOH B 70 167 226 HOH HOH . F 3 HOH B 71 168 231 HOH HOH . F 3 HOH B 72 169 235 HOH HOH . F 3 HOH B 73 170 240 HOH HOH . F 3 HOH B 74 171 241 HOH HOH . F 3 HOH B 75 172 247 HOH HOH . F 3 HOH B 76 173 252 HOH HOH . F 3 HOH B 77 174 254 HOH HOH . F 3 HOH B 78 175 256 HOH HOH . F 3 HOH B 79 176 258 HOH HOH . F 3 HOH B 80 177 259 HOH HOH . F 3 HOH B 81 178 260 HOH HOH . F 3 HOH B 82 179 261 HOH HOH . F 3 HOH B 83 180 263 HOH HOH . F 3 HOH B 84 181 265 HOH HOH . F 3 HOH B 85 182 275 HOH HOH . G 3 HOH C 1 98 7 HOH HOH . G 3 HOH C 2 99 13 HOH HOH . G 3 HOH C 3 100 15 HOH HOH . G 3 HOH C 4 101 16 HOH HOH . G 3 HOH C 5 102 18 HOH HOH . G 3 HOH C 6 103 20 HOH HOH . G 3 HOH C 7 104 22 HOH HOH . G 3 HOH C 8 105 33 HOH HOH . G 3 HOH C 9 106 34 HOH HOH . G 3 HOH C 10 107 36 HOH HOH . G 3 HOH C 11 108 41 HOH HOH . G 3 HOH C 12 109 60 HOH HOH . G 3 HOH C 13 110 63 HOH HOH . G 3 HOH C 14 111 67 HOH HOH . G 3 HOH C 15 112 69 HOH HOH . G 3 HOH C 16 113 70 HOH HOH . G 3 HOH C 17 114 75 HOH HOH . G 3 HOH C 18 115 88 HOH HOH . G 3 HOH C 19 116 90 HOH HOH . G 3 HOH C 20 117 91 HOH HOH . G 3 HOH C 21 118 96 HOH HOH . G 3 HOH C 22 119 97 HOH HOH . G 3 HOH C 23 120 107 HOH HOH . G 3 HOH C 24 121 115 HOH HOH . G 3 HOH C 25 122 116 HOH HOH . G 3 HOH C 26 123 117 HOH HOH . G 3 HOH C 27 124 123 HOH HOH . G 3 HOH C 28 125 127 HOH HOH . G 3 HOH C 29 126 128 HOH HOH . G 3 HOH C 30 127 129 HOH HOH . G 3 HOH C 31 128 134 HOH HOH . G 3 HOH C 32 129 135 HOH HOH . G 3 HOH C 33 130 137 HOH HOH . G 3 HOH C 34 131 139 HOH HOH . G 3 HOH C 35 132 143 HOH HOH . G 3 HOH C 36 133 144 HOH HOH . G 3 HOH C 37 134 146 HOH HOH . G 3 HOH C 38 135 149 HOH HOH . G 3 HOH C 39 136 158 HOH HOH . G 3 HOH C 40 137 160 HOH HOH . G 3 HOH C 41 138 161 HOH HOH . G 3 HOH C 42 139 162 HOH HOH . G 3 HOH C 43 140 163 HOH HOH . G 3 HOH C 44 141 166 HOH HOH . G 3 HOH C 45 142 170 HOH HOH . G 3 HOH C 46 143 173 HOH HOH . G 3 HOH C 47 144 175 HOH HOH . G 3 HOH C 48 145 176 HOH HOH . G 3 HOH C 49 146 178 HOH HOH . G 3 HOH C 50 147 180 HOH HOH . G 3 HOH C 51 148 182 HOH HOH . G 3 HOH C 52 149 183 HOH HOH . G 3 HOH C 53 150 184 HOH HOH . G 3 HOH C 54 151 185 HOH HOH . G 3 HOH C 55 152 188 HOH HOH . G 3 HOH C 56 153 189 HOH HOH . G 3 HOH C 57 154 190 HOH HOH . G 3 HOH C 58 155 193 HOH HOH . G 3 HOH C 59 156 194 HOH HOH . G 3 HOH C 60 157 197 HOH HOH . G 3 HOH C 61 158 200 HOH HOH . G 3 HOH C 62 159 202 HOH HOH . G 3 HOH C 63 160 203 HOH HOH . G 3 HOH C 64 161 210 HOH HOH . G 3 HOH C 65 162 211 HOH HOH . G 3 HOH C 66 163 214 HOH HOH . G 3 HOH C 67 164 215 HOH HOH . G 3 HOH C 68 165 224 HOH HOH . G 3 HOH C 69 166 229 HOH HOH . G 3 HOH C 70 167 230 HOH HOH . G 3 HOH C 71 168 233 HOH HOH . G 3 HOH C 72 169 239 HOH HOH . G 3 HOH C 73 170 242 HOH HOH . G 3 HOH C 74 171 244 HOH HOH . G 3 HOH C 75 172 245 HOH HOH . G 3 HOH C 76 173 255 HOH HOH . G 3 HOH C 77 174 257 HOH HOH . G 3 HOH C 78 175 264 HOH HOH . G 3 HOH C 79 176 266 HOH HOH . G 3 HOH C 80 177 267 HOH HOH . G 3 HOH C 81 178 269 HOH HOH . G 3 HOH C 82 179 272 HOH HOH . G 3 HOH C 83 180 274 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 68.687 -5.46 -12.732 1 43.66 ? S SO4 300 A 1 HETATM 2 O O1 SO4 . . . D 2 68.737 -4.353 -13.682 1 44.68 ? O1 SO4 300 A 1 HETATM 3 O O2 SO4 . . . D 2 70.01 -6.082 -12.636 1 51.31 ? O2 SO4 300 A 1 HETATM 4 O O3 SO4 . . . D 2 67.728 -6.432 -13.143 1 48.59 ? O3 SO4 300 A 1 HETATM 5 O O4 SO4 . . . D 2 68.552 -4.915 -11.405 1 49.18 ? O4 SO4 300 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #