data_1PYL # _model_server_result.job_id FyiQzfowWq3IwN2kHTiRNQ _model_server_result.datetime_utc '2024-10-15 06:16:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pyl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 1PYL # _exptl.entry_id 1PYL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.5 _cell.angle_gamma 90 _cell.entry_id 1PYL _cell.length_a 84.98 _cell.length_b 34.13 _cell.length_c 72.27 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PYL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 97 A CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 B SG CYS 9 B CYS 9 1_555 B SG CYS 97 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 271 n n S O2 SO4 doub 272 n n S O3 SO4 sing 273 n n S O4 SO4 sing 274 n n # _atom_sites.entry_id 1PYL _atom_sites.fract_transf_matrix[1][1] 0.011767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004167 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 199 99 SO4 SO4 . D 2 SO4 A 1 201 99 SO4 SO4 . E 2 SO4 B 1 198 98 SO4 SO4 . F 2 SO4 B 1 200 98 SO4 SO4 . G 3 HOH A 1 202 2 HOH HOH . G 3 HOH A 2 203 3 HOH HOH . G 3 HOH A 3 204 5 HOH HOH . G 3 HOH A 4 205 7 HOH HOH . G 3 HOH A 5 206 8 HOH HOH . G 3 HOH A 6 207 10 HOH HOH . G 3 HOH A 7 208 11 HOH HOH . G 3 HOH A 8 209 12 HOH HOH . G 3 HOH A 9 210 19 HOH HOH . G 3 HOH A 10 211 20 HOH HOH . G 3 HOH A 11 212 22 HOH HOH . G 3 HOH A 12 213 23 HOH HOH . G 3 HOH A 13 214 24 HOH HOH . G 3 HOH A 14 215 30 HOH HOH . G 3 HOH A 15 216 33 HOH HOH . G 3 HOH A 16 217 40 HOH HOH . G 3 HOH A 17 218 41 HOH HOH . G 3 HOH A 18 219 45 HOH HOH . G 3 HOH A 19 220 46 HOH HOH . G 3 HOH A 20 221 47 HOH HOH . G 3 HOH A 21 222 48 HOH HOH . G 3 HOH A 22 223 49 HOH HOH . G 3 HOH A 23 224 50 HOH HOH . G 3 HOH A 24 225 51 HOH HOH . G 3 HOH A 25 226 52 HOH HOH . G 3 HOH A 26 227 54 HOH HOH . G 3 HOH A 27 228 56 HOH HOH . G 3 HOH A 28 229 57 HOH HOH . G 3 HOH A 29 230 59 HOH HOH . G 3 HOH A 30 231 60 HOH HOH . G 3 HOH A 31 232 65 HOH HOH . G 3 HOH A 32 233 69 HOH HOH . G 3 HOH A 33 234 74 HOH HOH . G 3 HOH A 34 235 76 HOH HOH . G 3 HOH A 35 236 77 HOH HOH . G 3 HOH A 36 237 78 HOH HOH . G 3 HOH A 37 238 79 HOH HOH . G 3 HOH A 38 239 80 HOH HOH . G 3 HOH A 39 240 81 HOH HOH . G 3 HOH A 40 241 82 HOH HOH . G 3 HOH A 41 242 83 HOH HOH . G 3 HOH A 42 243 87 HOH HOH . G 3 HOH A 43 244 88 HOH HOH . G 3 HOH A 44 245 90 HOH HOH . G 3 HOH A 45 246 93 HOH HOH . G 3 HOH A 46 247 94 HOH HOH . G 3 HOH A 47 248 97 HOH HOH . G 3 HOH A 48 249 98 HOH HOH . G 3 HOH A 49 250 99 HOH HOH . G 3 HOH A 50 251 100 HOH HOH . G 3 HOH A 51 252 104 HOH HOH . G 3 HOH A 52 253 105 HOH HOH . G 3 HOH A 53 254 109 HOH HOH . G 3 HOH A 54 255 110 HOH HOH . G 3 HOH A 55 256 111 HOH HOH . G 3 HOH A 56 257 113 HOH HOH . G 3 HOH A 57 258 114 HOH HOH . G 3 HOH A 58 259 115 HOH HOH . G 3 HOH A 59 260 116 HOH HOH . G 3 HOH A 60 261 117 HOH HOH . G 3 HOH A 61 262 118 HOH HOH . G 3 HOH A 62 263 120 HOH HOH . G 3 HOH A 63 264 123 HOH HOH . G 3 HOH A 64 265 124 HOH HOH . G 3 HOH A 65 266 125 HOH HOH . G 3 HOH A 66 267 127 HOH HOH . G 3 HOH A 67 268 130 HOH HOH . G 3 HOH A 68 269 132 HOH HOH . G 3 HOH A 69 270 135 HOH HOH . G 3 HOH A 70 271 138 HOH HOH . G 3 HOH A 71 272 139 HOH HOH . G 3 HOH A 72 273 141 HOH HOH . G 3 HOH A 73 274 142 HOH HOH . G 3 HOH A 74 275 143 HOH HOH . G 3 HOH A 75 276 145 HOH HOH . G 3 HOH A 76 277 148 HOH HOH . G 3 HOH A 77 278 150 HOH HOH . G 3 HOH A 78 279 151 HOH HOH . G 3 HOH A 79 280 152 HOH HOH . G 3 HOH A 80 281 155 HOH HOH . G 3 HOH A 81 282 156 HOH HOH . G 3 HOH A 82 283 157 HOH HOH . G 3 HOH A 83 284 159 HOH HOH . G 3 HOH A 84 285 160 HOH HOH . G 3 HOH A 85 286 161 HOH HOH . G 3 HOH A 86 287 164 HOH HOH . G 3 HOH A 87 288 168 HOH HOH . H 3 HOH B 1 201 1 HOH HOH . H 3 HOH B 2 202 4 HOH HOH . H 3 HOH B 3 203 6 HOH HOH . H 3 HOH B 4 204 9 HOH HOH . H 3 HOH B 5 205 13 HOH HOH . H 3 HOH B 6 206 14 HOH HOH . H 3 HOH B 7 207 15 HOH HOH . H 3 HOH B 8 208 16 HOH HOH . H 3 HOH B 9 209 17 HOH HOH . H 3 HOH B 10 210 18 HOH HOH . H 3 HOH B 11 211 21 HOH HOH . H 3 HOH B 12 212 25 HOH HOH . H 3 HOH B 13 213 26 HOH HOH . H 3 HOH B 14 214 27 HOH HOH . H 3 HOH B 15 215 28 HOH HOH . H 3 HOH B 16 216 29 HOH HOH . H 3 HOH B 17 217 31 HOH HOH . H 3 HOH B 18 218 32 HOH HOH . H 3 HOH B 19 219 34 HOH HOH . H 3 HOH B 20 220 35 HOH HOH . H 3 HOH B 21 221 36 HOH HOH . H 3 HOH B 22 222 37 HOH HOH . H 3 HOH B 23 223 38 HOH HOH . H 3 HOH B 24 224 39 HOH HOH . H 3 HOH B 25 225 42 HOH HOH . H 3 HOH B 26 226 43 HOH HOH . H 3 HOH B 27 227 44 HOH HOH . H 3 HOH B 28 228 53 HOH HOH . H 3 HOH B 29 229 55 HOH HOH . H 3 HOH B 30 230 58 HOH HOH . H 3 HOH B 31 231 61 HOH HOH . H 3 HOH B 32 232 62 HOH HOH . H 3 HOH B 33 233 63 HOH HOH . H 3 HOH B 34 234 64 HOH HOH . H 3 HOH B 35 235 66 HOH HOH . H 3 HOH B 36 236 67 HOH HOH . H 3 HOH B 37 237 68 HOH HOH . H 3 HOH B 38 238 70 HOH HOH . H 3 HOH B 39 239 71 HOH HOH . H 3 HOH B 40 240 72 HOH HOH . H 3 HOH B 41 241 73 HOH HOH . H 3 HOH B 42 242 75 HOH HOH . H 3 HOH B 43 243 84 HOH HOH . H 3 HOH B 44 244 85 HOH HOH . H 3 HOH B 45 245 86 HOH HOH . H 3 HOH B 46 246 89 HOH HOH . H 3 HOH B 47 247 91 HOH HOH . H 3 HOH B 48 248 92 HOH HOH . H 3 HOH B 49 249 95 HOH HOH . H 3 HOH B 50 250 96 HOH HOH . H 3 HOH B 51 251 101 HOH HOH . H 3 HOH B 52 252 102 HOH HOH . H 3 HOH B 53 253 103 HOH HOH . H 3 HOH B 54 254 106 HOH HOH . H 3 HOH B 55 255 107 HOH HOH . H 3 HOH B 56 256 108 HOH HOH . H 3 HOH B 57 257 112 HOH HOH . H 3 HOH B 58 258 119 HOH HOH . H 3 HOH B 59 259 121 HOH HOH . H 3 HOH B 60 260 122 HOH HOH . H 3 HOH B 61 261 126 HOH HOH . H 3 HOH B 62 262 128 HOH HOH . H 3 HOH B 63 263 129 HOH HOH . H 3 HOH B 64 264 131 HOH HOH . H 3 HOH B 65 265 133 HOH HOH . H 3 HOH B 66 266 134 HOH HOH . H 3 HOH B 67 267 136 HOH HOH . H 3 HOH B 68 268 137 HOH HOH . H 3 HOH B 69 269 140 HOH HOH . H 3 HOH B 70 270 144 HOH HOH . H 3 HOH B 71 271 146 HOH HOH . H 3 HOH B 72 272 147 HOH HOH . H 3 HOH B 73 273 149 HOH HOH . H 3 HOH B 74 274 153 HOH HOH . H 3 HOH B 75 275 154 HOH HOH . H 3 HOH B 76 276 158 HOH HOH . H 3 HOH B 77 277 162 HOH HOH . H 3 HOH B 78 278 163 HOH HOH . H 3 HOH B 79 279 165 HOH HOH . H 3 HOH B 80 280 166 HOH HOH . H 3 HOH B 81 281 167 HOH HOH . H 3 HOH B 82 282 169 HOH HOH . H 3 HOH B 83 283 170 HOH HOH . H 3 HOH B 84 284 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 9.416 2.772 36.245 1 30.13 ? S SO4 201 A 1 HETATM 2 O O1 SO4 . . . D 2 8.171 1.985 36.351 1 33.26 ? O1 SO4 201 A 1 HETATM 3 O O2 SO4 . . . D 2 9.675 3.252 34.891 1 27.81 ? O2 SO4 201 A 1 HETATM 4 O O3 SO4 . . . D 2 10.567 1.964 36.691 1 32.98 ? O3 SO4 201 A 1 HETATM 5 O O4 SO4 . . . D 2 9.299 3.931 37.163 1 33.66 ? O4 SO4 201 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 536 _model_server_stats.encode_time_ms 30 _model_server_stats.element_count 5 #