data_1PYU # _model_server_result.job_id '_PBEmSI0vw_dq0oF4J3atQ' _model_server_result.datetime_utc '2024-11-14 22:03:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pyu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 1PYU # _exptl.entry_id 1PYU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1PYU _cell.length_a 70.787 _cell.length_b 70.787 _cell.length_c 217.121 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PYU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 36.186833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1PYU _atom_sites.fract_transf_matrix[1][1] 0.014127 _atom_sites.fract_transf_matrix[1][2] 0.008156 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 B 1 202 2 SO4 SO1 . F 3 SO4 D 1 201 1 SO4 SO1 . G 4 HOH A 1 25 13 HOH HOH . G 4 HOH A 2 26 19 HOH HOH . G 4 HOH A 3 27 20 HOH HOH . G 4 HOH A 4 28 25 HOH HOH . G 4 HOH A 5 29 27 HOH HOH . G 4 HOH A 6 30 39 HOH HOH . G 4 HOH A 7 31 42 HOH HOH . G 4 HOH A 8 32 55 HOH HOH . G 4 HOH A 9 33 67 HOH HOH . G 4 HOH A 10 34 68 HOH HOH . G 4 HOH A 11 35 79 HOH HOH . G 4 HOH A 12 36 87 HOH HOH . G 4 HOH A 13 37 91 HOH HOH . G 4 HOH A 14 38 94 HOH HOH . G 4 HOH A 15 39 98 HOH HOH . G 4 HOH A 16 40 103 HOH HOH . G 4 HOH A 17 41 131 HOH HOH . G 4 HOH A 18 42 144 HOH HOH . G 4 HOH A 19 43 146 HOH HOH . G 4 HOH A 20 44 155 HOH HOH . G 4 HOH A 21 45 174 HOH HOH . H 4 HOH B 1 203 2 HOH HOH . H 4 HOH B 2 204 4 HOH HOH . H 4 HOH B 3 205 7 HOH HOH . H 4 HOH B 4 206 8 HOH HOH . H 4 HOH B 5 207 11 HOH HOH . H 4 HOH B 6 208 15 HOH HOH . H 4 HOH B 7 209 28 HOH HOH . H 4 HOH B 8 210 29 HOH HOH . H 4 HOH B 9 211 31 HOH HOH . H 4 HOH B 10 212 33 HOH HOH . H 4 HOH B 11 213 34 HOH HOH . H 4 HOH B 12 214 36 HOH HOH . H 4 HOH B 13 215 37 HOH HOH . H 4 HOH B 14 216 38 HOH HOH . H 4 HOH B 15 217 43 HOH HOH . H 4 HOH B 16 218 46 HOH HOH . H 4 HOH B 17 219 47 HOH HOH . H 4 HOH B 18 220 48 HOH HOH . H 4 HOH B 19 221 51 HOH HOH . H 4 HOH B 20 222 52 HOH HOH . H 4 HOH B 21 223 53 HOH HOH . H 4 HOH B 22 224 56 HOH HOH . H 4 HOH B 23 225 57 HOH HOH . H 4 HOH B 24 226 58 HOH HOH . H 4 HOH B 25 227 61 HOH HOH . H 4 HOH B 26 228 62 HOH HOH . H 4 HOH B 27 229 63 HOH HOH . H 4 HOH B 28 230 64 HOH HOH . H 4 HOH B 29 231 66 HOH HOH . H 4 HOH B 30 232 69 HOH HOH . H 4 HOH B 31 233 70 HOH HOH . H 4 HOH B 32 234 71 HOH HOH . H 4 HOH B 33 235 73 HOH HOH . H 4 HOH B 34 236 74 HOH HOH . H 4 HOH B 35 237 76 HOH HOH . H 4 HOH B 36 238 77 HOH HOH . H 4 HOH B 37 239 80 HOH HOH . H 4 HOH B 38 240 83 HOH HOH . H 4 HOH B 39 241 89 HOH HOH . H 4 HOH B 40 242 96 HOH HOH . H 4 HOH B 41 243 99 HOH HOH . H 4 HOH B 42 244 101 HOH HOH . H 4 HOH B 43 245 102 HOH HOH . H 4 HOH B 44 246 104 HOH HOH . H 4 HOH B 45 247 105 HOH HOH . H 4 HOH B 46 248 106 HOH HOH . H 4 HOH B 47 249 109 HOH HOH . H 4 HOH B 48 250 110 HOH HOH . H 4 HOH B 49 251 113 HOH HOH . H 4 HOH B 50 252 117 HOH HOH . H 4 HOH B 51 253 121 HOH HOH . H 4 HOH B 52 254 124 HOH HOH . H 4 HOH B 53 255 125 HOH HOH . H 4 HOH B 54 256 129 HOH HOH . H 4 HOH B 55 257 133 HOH HOH . H 4 HOH B 56 258 137 HOH HOH . H 4 HOH B 57 259 142 HOH HOH . H 4 HOH B 58 260 147 HOH HOH . H 4 HOH B 59 261 149 HOH HOH . H 4 HOH B 60 262 156 HOH HOH . H 4 HOH B 61 263 157 HOH HOH . H 4 HOH B 62 264 159 HOH HOH . H 4 HOH B 63 265 160 HOH HOH . H 4 HOH B 64 266 163 HOH HOH . H 4 HOH B 65 267 164 HOH HOH . H 4 HOH B 66 268 165 HOH HOH . H 4 HOH B 67 269 166 HOH HOH . H 4 HOH B 68 270 167 HOH HOH . H 4 HOH B 69 271 170 HOH HOH . H 4 HOH B 70 272 171 HOH HOH . H 4 HOH B 71 273 176 HOH HOH . H 4 HOH B 72 274 177 HOH HOH . H 4 HOH B 73 275 179 HOH HOH . H 4 HOH B 74 276 180 HOH HOH . I 4 HOH C 1 25 9 HOH HOH . I 4 HOH C 2 26 21 HOH HOH . I 4 HOH C 3 27 23 HOH HOH . I 4 HOH C 4 28 35 HOH HOH . I 4 HOH C 5 29 65 HOH HOH . I 4 HOH C 6 30 82 HOH HOH . I 4 HOH C 7 31 107 HOH HOH . I 4 HOH C 8 32 112 HOH HOH . I 4 HOH C 9 33 114 HOH HOH . I 4 HOH C 10 34 115 HOH HOH . I 4 HOH C 11 35 118 HOH HOH . I 4 HOH C 12 36 126 HOH HOH . I 4 HOH C 13 37 127 HOH HOH . I 4 HOH C 14 38 134 HOH HOH . I 4 HOH C 15 39 138 HOH HOH . I 4 HOH C 16 40 168 HOH HOH . J 4 HOH D 1 202 1 HOH HOH . J 4 HOH D 2 203 3 HOH HOH . J 4 HOH D 3 204 5 HOH HOH . J 4 HOH D 4 205 6 HOH HOH . J 4 HOH D 5 206 10 HOH HOH . J 4 HOH D 6 207 12 HOH HOH . J 4 HOH D 7 208 14 HOH HOH . J 4 HOH D 8 209 16 HOH HOH . J 4 HOH D 9 210 17 HOH HOH . J 4 HOH D 10 211 18 HOH HOH . J 4 HOH D 11 212 22 HOH HOH . J 4 HOH D 12 213 24 HOH HOH . J 4 HOH D 13 214 26 HOH HOH . J 4 HOH D 14 215 30 HOH HOH . J 4 HOH D 15 216 32 HOH HOH . J 4 HOH D 16 217 40 HOH HOH . J 4 HOH D 17 218 41 HOH HOH . J 4 HOH D 18 219 44 HOH HOH . J 4 HOH D 19 220 45 HOH HOH . J 4 HOH D 20 221 49 HOH HOH . J 4 HOH D 21 222 50 HOH HOH . J 4 HOH D 22 223 54 HOH HOH . J 4 HOH D 23 224 59 HOH HOH . J 4 HOH D 24 225 60 HOH HOH . J 4 HOH D 25 226 72 HOH HOH . J 4 HOH D 26 227 75 HOH HOH . J 4 HOH D 27 228 78 HOH HOH . J 4 HOH D 28 229 81 HOH HOH . J 4 HOH D 29 230 84 HOH HOH . J 4 HOH D 30 231 85 HOH HOH . J 4 HOH D 31 232 86 HOH HOH . J 4 HOH D 32 233 88 HOH HOH . J 4 HOH D 33 234 90 HOH HOH . J 4 HOH D 34 235 92 HOH HOH . J 4 HOH D 35 236 93 HOH HOH . J 4 HOH D 36 237 95 HOH HOH . J 4 HOH D 37 238 97 HOH HOH . J 4 HOH D 38 239 100 HOH HOH . J 4 HOH D 39 240 108 HOH HOH . J 4 HOH D 40 241 111 HOH HOH . J 4 HOH D 41 242 116 HOH HOH . J 4 HOH D 42 243 119 HOH HOH . J 4 HOH D 43 244 120 HOH HOH . J 4 HOH D 44 245 122 HOH HOH . J 4 HOH D 45 246 123 HOH HOH . J 4 HOH D 46 247 128 HOH HOH . J 4 HOH D 47 248 130 HOH HOH . J 4 HOH D 48 249 132 HOH HOH . J 4 HOH D 49 250 135 HOH HOH . J 4 HOH D 50 251 136 HOH HOH . J 4 HOH D 51 252 139 HOH HOH . J 4 HOH D 52 253 140 HOH HOH . J 4 HOH D 53 254 141 HOH HOH . J 4 HOH D 54 255 143 HOH HOH . J 4 HOH D 55 256 145 HOH HOH . J 4 HOH D 56 257 148 HOH HOH . J 4 HOH D 57 258 150 HOH HOH . J 4 HOH D 58 259 151 HOH HOH . J 4 HOH D 59 260 152 HOH HOH . J 4 HOH D 60 261 153 HOH HOH . J 4 HOH D 61 262 154 HOH HOH . J 4 HOH D 62 263 158 HOH HOH . J 4 HOH D 63 264 161 HOH HOH . J 4 HOH D 64 265 162 HOH HOH . J 4 HOH D 65 266 169 HOH HOH . J 4 HOH D 66 267 172 HOH HOH . J 4 HOH D 67 268 173 HOH HOH . J 4 HOH D 68 269 175 HOH HOH . J 4 HOH D 69 270 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 66.277 35.854 32.146 1 60.35 ? S SO4 202 B 1 HETATM 2 O O1 SO4 . . . E 3 64.88 35.831 31.743 1 62.06 ? O1 SO4 202 B 1 HETATM 3 O O2 SO4 . . . E 3 66.52 36.973 33.023 1 64.76 ? O2 SO4 202 B 1 HETATM 4 O O3 SO4 . . . E 3 66.596 34.631 32.858 1 61.62 ? O3 SO4 202 B 1 HETATM 5 O O4 SO4 . . . E 3 67.146 36.02 31.011 1 58.99 ? O4 SO4 202 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #