data_1PZL # _model_server_result.job_id ZWV6r_vTyb186pweVQ1ktA _model_server_result.datetime_utc '2024-12-28 10:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pzl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1PZL # _exptl.entry_id 1PZL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1PZL _cell.length_a 81.491 _cell.length_b 81.491 _cell.length_c 104.709 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PZL _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 1PZL _atom_sites.fract_transf_matrix[1][1] 0.012271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00955 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MYR A 1 500 500 MYR MYR . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 5 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 7 HOH HOH . D 4 HOH A 8 508 8 HOH HOH . D 4 HOH A 9 509 9 HOH HOH . D 4 HOH A 10 510 10 HOH HOH . D 4 HOH A 11 511 11 HOH HOH . D 4 HOH A 12 512 12 HOH HOH . D 4 HOH A 13 513 13 HOH HOH . D 4 HOH A 14 514 14 HOH HOH . D 4 HOH A 15 515 15 HOH HOH . D 4 HOH A 16 516 16 HOH HOH . D 4 HOH A 17 517 17 HOH HOH . D 4 HOH A 18 518 18 HOH HOH . D 4 HOH A 19 519 19 HOH HOH . D 4 HOH A 20 520 20 HOH HOH . D 4 HOH A 21 521 21 HOH HOH . D 4 HOH A 22 522 22 HOH HOH . D 4 HOH A 23 523 23 HOH HOH . D 4 HOH A 24 524 24 HOH HOH . D 4 HOH A 25 525 25 HOH HOH . D 4 HOH A 26 526 26 HOH HOH . D 4 HOH A 27 527 27 HOH HOH . D 4 HOH A 28 528 28 HOH HOH . D 4 HOH A 29 529 29 HOH HOH . D 4 HOH A 30 530 30 HOH HOH . D 4 HOH A 31 531 31 HOH HOH . D 4 HOH A 32 532 32 HOH HOH . D 4 HOH A 33 533 33 HOH HOH . D 4 HOH A 34 534 34 HOH HOH . D 4 HOH A 35 535 35 HOH HOH . D 4 HOH A 36 536 36 HOH HOH . D 4 HOH A 37 537 37 HOH HOH . D 4 HOH A 38 538 38 HOH HOH . D 4 HOH A 39 539 39 HOH HOH . D 4 HOH A 40 540 40 HOH HOH . D 4 HOH A 41 541 41 HOH HOH . D 4 HOH A 42 542 42 HOH HOH . D 4 HOH A 43 543 43 HOH HOH . D 4 HOH A 44 544 44 HOH HOH . D 4 HOH A 45 545 45 HOH HOH . D 4 HOH A 46 546 46 HOH HOH . D 4 HOH A 47 547 47 HOH HOH . D 4 HOH A 48 548 48 HOH HOH . D 4 HOH A 49 549 50 HOH HOH . D 4 HOH A 50 550 51 HOH HOH . D 4 HOH A 51 551 52 HOH HOH . D 4 HOH A 52 552 54 HOH HOH . D 4 HOH A 53 553 55 HOH HOH . D 4 HOH A 54 554 56 HOH HOH . D 4 HOH A 55 555 57 HOH HOH . D 4 HOH A 56 556 58 HOH HOH . D 4 HOH A 57 557 59 HOH HOH . D 4 HOH A 58 558 60 HOH HOH . D 4 HOH A 59 559 61 HOH HOH . D 4 HOH A 60 560 62 HOH HOH . D 4 HOH A 61 561 63 HOH HOH . D 4 HOH A 62 562 64 HOH HOH . D 4 HOH A 63 563 65 HOH HOH . D 4 HOH A 64 564 66 HOH HOH . D 4 HOH A 65 565 67 HOH HOH . D 4 HOH A 66 566 68 HOH HOH . D 4 HOH A 67 567 69 HOH HOH . D 4 HOH A 68 568 70 HOH HOH . D 4 HOH A 69 569 71 HOH HOH . D 4 HOH A 70 570 72 HOH HOH . D 4 HOH A 71 571 73 HOH HOH . D 4 HOH A 72 572 74 HOH HOH . D 4 HOH A 73 573 75 HOH HOH . D 4 HOH A 74 574 76 HOH HOH . D 4 HOH A 75 575 77 HOH HOH . D 4 HOH A 76 576 78 HOH HOH . D 4 HOH A 77 577 79 HOH HOH . D 4 HOH A 78 578 80 HOH HOH . D 4 HOH A 79 579 81 HOH HOH . D 4 HOH A 80 580 82 HOH HOH . D 4 HOH A 81 581 83 HOH HOH . D 4 HOH A 82 582 84 HOH HOH . D 4 HOH A 83 583 85 HOH HOH . D 4 HOH A 84 584 86 HOH HOH . D 4 HOH A 85 585 87 HOH HOH . D 4 HOH A 86 586 88 HOH HOH . D 4 HOH A 87 587 89 HOH HOH . D 4 HOH A 88 588 90 HOH HOH . D 4 HOH A 89 589 91 HOH HOH . D 4 HOH A 90 590 92 HOH HOH . D 4 HOH A 91 591 93 HOH HOH . D 4 HOH A 92 592 94 HOH HOH . D 4 HOH A 93 593 95 HOH HOH . D 4 HOH A 94 594 96 HOH HOH . D 4 HOH A 95 595 97 HOH HOH . D 4 HOH A 96 596 98 HOH HOH . D 4 HOH A 97 597 99 HOH HOH . D 4 HOH A 98 598 100 HOH HOH . D 4 HOH A 99 599 101 HOH HOH . D 4 HOH A 100 600 102 HOH HOH . D 4 HOH A 101 601 103 HOH HOH . D 4 HOH A 102 602 104 HOH HOH . D 4 HOH A 103 603 105 HOH HOH . D 4 HOH A 104 604 107 HOH HOH . D 4 HOH A 105 605 108 HOH HOH . D 4 HOH A 106 606 109 HOH HOH . D 4 HOH A 107 607 110 HOH HOH . D 4 HOH A 108 608 111 HOH HOH . D 4 HOH A 109 609 112 HOH HOH . D 4 HOH A 110 610 113 HOH HOH . D 4 HOH A 111 611 114 HOH HOH . D 4 HOH A 112 612 115 HOH HOH . D 4 HOH A 113 613 116 HOH HOH . D 4 HOH A 114 614 117 HOH HOH . D 4 HOH A 115 615 118 HOH HOH . D 4 HOH A 116 616 119 HOH HOH . D 4 HOH A 117 617 120 HOH HOH . D 4 HOH A 118 618 121 HOH HOH . D 4 HOH A 119 619 122 HOH HOH . D 4 HOH A 120 620 123 HOH HOH . D 4 HOH A 121 621 124 HOH HOH . D 4 HOH A 122 622 125 HOH HOH . D 4 HOH A 123 623 126 HOH HOH . D 4 HOH A 124 624 127 HOH HOH . D 4 HOH A 125 625 128 HOH HOH . D 4 HOH A 126 626 131 HOH HOH . D 4 HOH A 127 627 134 HOH HOH . D 4 HOH A 128 628 135 HOH HOH . D 4 HOH A 129 629 136 HOH HOH . D 4 HOH A 130 630 137 HOH HOH . D 4 HOH A 131 631 138 HOH HOH . E 4 HOH B 1 53 53 HOH HOH . E 4 HOH B 2 106 106 HOH HOH . E 4 HOH B 3 129 129 HOH HOH . E 4 HOH B 4 130 130 HOH HOH . E 4 HOH B 5 132 132 HOH HOH . E 4 HOH B 6 133 133 HOH HOH . E 4 HOH B 7 139 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 3 77.014 18.898 43.792 1 30.96 ? C1 MYR 500 A 1 HETATM 2 O O1 MYR . . . C 3 77.418 17.797 43.547 1 30.51 ? O1 MYR 500 A 1 HETATM 3 O O2 MYR . . . C 3 77.175 19.402 44.967 1 30.81 ? O2 MYR 500 A 1 HETATM 4 C C2 MYR . . . C 3 76.28 19.778 42.773 1 31.7 ? C2 MYR 500 A 1 HETATM 5 C C3 MYR . . . C 3 75.432 19.011 41.762 1 33.64 ? C3 MYR 500 A 1 HETATM 6 C C4 MYR . . . C 3 74.349 18.132 42.38 1 35.25 ? C4 MYR 500 A 1 HETATM 7 C C5 MYR . . . C 3 73.495 17.345 41.383 1 37.56 ? C5 MYR 500 A 1 HETATM 8 C C6 MYR . . . C 3 72.01 17.401 41.763 1 40.77 ? C6 MYR 500 A 1 HETATM 9 C C7 MYR . . . C 3 71.609 16.69 43.044 1 40.99 ? C7 MYR 500 A 1 HETATM 10 C C8 MYR . . . C 3 70.134 16.302 42.995 1 46.07 ? C8 MYR 500 A 1 HETATM 11 C C9 MYR . . . C 3 69.251 17.273 43.754 1 48.61 ? C9 MYR 500 A 1 HETATM 12 C C10 MYR . . . C 3 67.817 17.331 43.233 1 50.32 ? C10 MYR 500 A 1 HETATM 13 C C11 MYR . . . C 3 67.714 18.15 41.956 1 52.59 ? C11 MYR 500 A 1 HETATM 14 C C12 MYR . . . C 3 67.527 19.646 42.129 1 53.88 ? C12 MYR 500 A 1 HETATM 15 C C13 MYR . . . C 3 67.437 20.319 40.768 1 53.64 ? C13 MYR 500 A 1 HETATM 16 C C14 MYR . . . C 3 67.248 21.827 40.816 1 51.58 ? C14 MYR 500 A 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 433 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #