data_1PZY # _model_server_result.job_id Y8BrY4jeHwrep7xpYXEg2Q _model_server_result.datetime_utc '2024-11-14 22:03:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1pzy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 1PZY # _exptl.entry_id 1PZY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.92 _cell.angle_gamma 90 _cell.entry_id 1PZY _cell.length_a 55.292 _cell.length_b 98.747 _cell.length_c 102.788 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PZY _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 120 A CYS 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 28 A CYS 28 1_555 A SG CYS 111 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 61 A CYS 61 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 73 A CYS 73 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 B SG CYS 18 B CYS 134 1_555 B SG CYS 60 B CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 131 B CYS 247 1_555 B SG CYS 150 B CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 C SG CYS 6 C CYS 6 1_555 C SG CYS 120 C CYS 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf8 C SG CYS 28 C CYS 28 1_555 C SG CYS 111 C CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 C SG CYS 61 C CYS 61 1_555 C SG CYS 77 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf10 C SG CYS 73 C CYS 73 1_555 C SG CYS 91 C CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 D SG CYS 18 D CYS 134 1_555 D SG CYS 60 D CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf12 D SG CYS 131 D CYS 247 1_555 D SG CYS 150 D CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A O LYS 79 A LYS 79 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A OD1 ASP 82 A ASP 82 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc3 A OD2 ASP 82 A ASP 82 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.333 ? metalc ? metalc4 A O GLU 84 A GLU 84 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc5 A OD1 ASP 87 A ASP 87 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc6 A OD2 ASP 88 A ASP 88 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc7 E CA CA . A CA 403 1_555 M O HOH . A HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc8 E CA CA . A CA 403 1_555 M O HOH . A HOH 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc9 B OD2 ASP 138 B ASP 254 1_555 G MN MN . B MN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc10 H O1A UDP . B UDP 407 1_555 G MN MN . B MN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc11 G MN MN . B MN 408 1_555 N O HOH . B HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc12 C O LYS 79 C LYS 79 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc13 C OD2 ASP 82 C ASP 82 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.39 ? metalc ? metalc14 C OD1 ASP 82 C ASP 82 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc15 C O GLU 84 C GLU 84 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc16 C OD1 ASP 87 C ASP 87 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc17 C OD2 ASP 87 C ASP 87 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.357 ? metalc ? metalc18 C OD2 ASP 88 C ASP 88 1_555 I CA CA . C CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc19 I CA CA . C CA 404 1_555 O O HOH . C HOH 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc20 I CA CA . C CA 404 1_555 O O HOH . C HOH 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc21 D OD1 ASP 138 D ASP 254 1_555 K MN MN . D MN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc22 L O3A UDP . D UDP 409 1_555 K MN MN . D MN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc23 L O2B UDP . D UDP 409 1_555 K MN MN . D MN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 388 n n N1 C6 UDP sing 389 n n N1 C1' UDP sing 390 n n C2 N3 UDP sing 391 n n C2 O2 UDP doub 392 n n N3 C4 UDP sing 393 n n N3 HN3 UDP sing 394 n n C4 C5 UDP sing 395 n n C4 O4 UDP doub 396 n n C5 C6 UDP doub 397 n n C5 H5 UDP sing 398 n n C6 H6 UDP sing 399 n n C1' C2' UDP sing 400 n n C1' O4' UDP sing 401 n n C1' H1' UDP sing 402 n n C2' O2' UDP sing 403 n n C2' C3' UDP sing 404 n n C2' H2' UDP sing 405 n n O2' HO2' UDP sing 406 n n C3' C4' UDP sing 407 n n C3' O3' UDP sing 408 n n C3' H3' UDP sing 409 n n C4' O4' UDP sing 410 n n C4' C5' UDP sing 411 n n C4' H4' UDP sing 412 n n O3' HO3' UDP sing 413 n n C5' O5' UDP sing 414 n n C5' "H5'1" UDP sing 415 n n C5' "H5'2" UDP sing 416 n n O5' PA UDP sing 417 n n PA O1A UDP doub 418 n n PA O2A UDP sing 419 n n PA O3A UDP sing 420 n n O2A HOA2 UDP sing 421 n n O3A PB UDP sing 422 n n PB O1B UDP doub 423 n n PB O2B UDP sing 424 n n PB O3B UDP sing 425 n n O2B HOB2 UDP sing 426 n n O3B HOB3 UDP sing 427 n n # _atom_sites.entry_id 1PZY _atom_sites.fract_transf_matrix[1][1] 0.018086 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004482 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CA A 1 403 403 CA CA . F 4 NAG B 1 405 405 NAG NAG . G 5 MN B 1 408 408 MN MN . H 6 UDP B 1 407 407 UDP UDP . I 3 CA C 1 404 404 CA CA . J 4 NAG D 1 406 406 NAG NAG . K 5 MN D 1 410 410 MN MN . L 6 UDP D 1 409 409 UDP UDP . M 7 HOH A 1 412 412 HOH HOH . M 7 HOH A 2 415 415 HOH HOH . M 7 HOH A 3 417 417 HOH HOH . M 7 HOH A 4 424 424 HOH HOH . M 7 HOH A 5 425 425 HOH HOH . M 7 HOH A 6 441 441 HOH HOH . M 7 HOH A 7 444 444 HOH HOH . M 7 HOH A 8 455 455 HOH HOH . M 7 HOH A 9 459 459 HOH HOH . M 7 HOH A 10 467 467 HOH HOH . M 7 HOH A 11 469 469 HOH HOH . M 7 HOH A 12 470 470 HOH HOH . M 7 HOH A 13 472 472 HOH HOH . M 7 HOH A 14 473 473 HOH HOH . M 7 HOH A 15 484 484 HOH HOH . M 7 HOH A 16 492 492 HOH HOH . M 7 HOH A 17 503 503 HOH HOH . M 7 HOH A 18 504 504 HOH HOH . M 7 HOH A 19 511 511 HOH HOH . M 7 HOH A 20 522 522 HOH HOH . M 7 HOH A 21 526 526 HOH HOH . M 7 HOH A 22 540 540 HOH HOH . M 7 HOH A 23 542 542 HOH HOH . M 7 HOH A 24 561 561 HOH HOH . M 7 HOH A 25 563 563 HOH HOH . M 7 HOH A 26 564 564 HOH HOH . M 7 HOH A 27 573 573 HOH HOH . M 7 HOH A 28 590 590 HOH HOH . M 7 HOH A 29 591 591 HOH HOH . M 7 HOH A 30 600 600 HOH HOH . M 7 HOH A 31 601 601 HOH HOH . M 7 HOH A 32 606 606 HOH HOH . M 7 HOH A 33 608 608 HOH HOH . M 7 HOH A 34 609 609 HOH HOH . M 7 HOH A 35 611 611 HOH HOH . M 7 HOH A 36 614 614 HOH HOH . M 7 HOH A 37 620 620 HOH HOH . M 7 HOH A 38 627 627 HOH HOH . M 7 HOH A 39 632 632 HOH HOH . M 7 HOH A 40 633 633 HOH HOH . M 7 HOH A 41 634 634 HOH HOH . M 7 HOH A 42 635 635 HOH HOH . M 7 HOH A 43 636 636 HOH HOH . M 7 HOH A 44 640 640 HOH HOH . M 7 HOH A 45 649 649 HOH HOH . M 7 HOH A 46 660 660 HOH HOH . N 7 HOH B 1 413 413 HOH HOH . N 7 HOH B 2 414 414 HOH HOH . N 7 HOH B 3 418 418 HOH HOH . N 7 HOH B 4 420 420 HOH HOH . N 7 HOH B 5 428 428 HOH HOH . N 7 HOH B 6 431 431 HOH HOH . N 7 HOH B 7 433 433 HOH HOH . N 7 HOH B 8 434 434 HOH HOH . N 7 HOH B 9 437 437 HOH HOH . N 7 HOH B 10 438 438 HOH HOH . N 7 HOH B 11 439 439 HOH HOH . N 7 HOH B 12 440 440 HOH HOH . N 7 HOH B 13 443 443 HOH HOH . N 7 HOH B 14 447 447 HOH HOH . N 7 HOH B 15 449 449 HOH HOH . N 7 HOH B 16 450 450 HOH HOH . N 7 HOH B 17 451 451 HOH HOH . N 7 HOH B 18 454 454 HOH HOH . N 7 HOH B 19 456 456 HOH HOH . N 7 HOH B 20 460 460 HOH HOH . N 7 HOH B 21 461 461 HOH HOH . N 7 HOH B 22 463 463 HOH HOH . N 7 HOH B 23 471 471 HOH HOH . N 7 HOH B 24 481 481 HOH HOH . N 7 HOH B 25 482 482 HOH HOH . N 7 HOH B 26 483 483 HOH HOH . N 7 HOH B 27 486 486 HOH HOH . N 7 HOH B 28 487 487 HOH HOH . N 7 HOH B 29 488 488 HOH HOH . N 7 HOH B 30 489 489 HOH HOH . N 7 HOH B 31 493 493 HOH HOH . N 7 HOH B 32 495 495 HOH HOH . N 7 HOH B 33 498 498 HOH HOH . N 7 HOH B 34 501 501 HOH HOH . N 7 HOH B 35 507 507 HOH HOH . N 7 HOH B 36 508 508 HOH HOH . N 7 HOH B 37 510 510 HOH HOH . N 7 HOH B 38 514 514 HOH HOH . N 7 HOH B 39 524 524 HOH HOH . N 7 HOH B 40 529 529 HOH HOH . N 7 HOH B 41 530 530 HOH HOH . N 7 HOH B 42 532 532 HOH HOH . N 7 HOH B 43 534 534 HOH HOH . N 7 HOH B 44 536 536 HOH HOH . N 7 HOH B 45 538 538 HOH HOH . N 7 HOH B 46 543 543 HOH HOH . N 7 HOH B 47 544 544 HOH HOH . N 7 HOH B 48 550 550 HOH HOH . N 7 HOH B 49 551 551 HOH HOH . N 7 HOH B 50 554 554 HOH HOH . N 7 HOH B 51 556 556 HOH HOH . N 7 HOH B 52 557 557 HOH HOH . N 7 HOH B 53 558 558 HOH HOH . N 7 HOH B 54 559 559 HOH HOH . N 7 HOH B 55 562 562 HOH HOH . N 7 HOH B 56 566 566 HOH HOH . N 7 HOH B 57 577 577 HOH HOH . N 7 HOH B 58 579 579 HOH HOH . N 7 HOH B 59 584 584 HOH HOH . N 7 HOH B 60 585 585 HOH HOH . N 7 HOH B 61 586 586 HOH HOH . N 7 HOH B 62 589 589 HOH HOH . N 7 HOH B 63 592 592 HOH HOH . N 7 HOH B 64 593 593 HOH HOH . N 7 HOH B 65 595 595 HOH HOH . N 7 HOH B 66 596 596 HOH HOH . N 7 HOH B 67 597 597 HOH HOH . N 7 HOH B 68 598 598 HOH HOH . N 7 HOH B 69 599 599 HOH HOH . N 7 HOH B 70 602 602 HOH HOH . N 7 HOH B 71 603 603 HOH HOH . N 7 HOH B 72 607 607 HOH HOH . N 7 HOH B 73 617 617 HOH HOH . N 7 HOH B 74 618 618 HOH HOH . N 7 HOH B 75 621 621 HOH HOH . N 7 HOH B 76 626 626 HOH HOH . N 7 HOH B 77 637 637 HOH HOH . N 7 HOH B 78 638 638 HOH HOH . N 7 HOH B 79 643 643 HOH HOH . N 7 HOH B 80 644 644 HOH HOH . N 7 HOH B 81 648 648 HOH HOH . N 7 HOH B 82 650 650 HOH HOH . N 7 HOH B 83 651 651 HOH HOH . N 7 HOH B 84 654 654 HOH HOH . N 7 HOH B 85 661 661 HOH HOH . O 7 HOH C 1 423 423 HOH HOH . O 7 HOH C 2 426 426 HOH HOH . O 7 HOH C 3 427 427 HOH HOH . O 7 HOH C 4 435 435 HOH HOH . O 7 HOH C 5 457 457 HOH HOH . O 7 HOH C 6 506 506 HOH HOH . O 7 HOH C 7 512 512 HOH HOH . O 7 HOH C 8 523 523 HOH HOH . O 7 HOH C 9 531 531 HOH HOH . O 7 HOH C 10 552 552 HOH HOH . O 7 HOH C 11 555 555 HOH HOH . O 7 HOH C 12 570 570 HOH HOH . O 7 HOH C 13 572 572 HOH HOH . O 7 HOH C 14 578 578 HOH HOH . O 7 HOH C 15 581 581 HOH HOH . O 7 HOH C 16 582 582 HOH HOH . O 7 HOH C 17 583 583 HOH HOH . O 7 HOH C 18 588 588 HOH HOH . O 7 HOH C 19 624 624 HOH HOH . O 7 HOH C 20 628 628 HOH HOH . O 7 HOH C 21 630 630 HOH HOH . O 7 HOH C 22 645 645 HOH HOH . O 7 HOH C 23 652 652 HOH HOH . O 7 HOH C 24 653 653 HOH HOH . O 7 HOH C 25 655 655 HOH HOH . P 7 HOH D 1 411 411 HOH HOH . P 7 HOH D 2 416 416 HOH HOH . P 7 HOH D 3 419 419 HOH HOH . P 7 HOH D 4 421 421 HOH HOH . P 7 HOH D 5 422 422 HOH HOH . P 7 HOH D 6 429 429 HOH HOH . P 7 HOH D 7 430 430 HOH HOH . P 7 HOH D 8 432 432 HOH HOH . P 7 HOH D 9 436 436 HOH HOH . P 7 HOH D 10 442 442 HOH HOH . P 7 HOH D 11 445 445 HOH HOH . P 7 HOH D 12 446 446 HOH HOH . P 7 HOH D 13 448 448 HOH HOH . P 7 HOH D 14 452 452 HOH HOH . P 7 HOH D 15 453 453 HOH HOH . P 7 HOH D 16 458 458 HOH HOH . P 7 HOH D 17 462 462 HOH HOH . P 7 HOH D 18 464 464 HOH HOH . P 7 HOH D 19 465 465 HOH HOH . P 7 HOH D 20 466 466 HOH HOH . P 7 HOH D 21 468 468 HOH HOH . P 7 HOH D 22 474 474 HOH HOH . P 7 HOH D 23 475 475 HOH HOH . P 7 HOH D 24 476 476 HOH HOH . P 7 HOH D 25 477 477 HOH HOH . P 7 HOH D 26 478 478 HOH HOH . P 7 HOH D 27 479 479 HOH HOH . P 7 HOH D 28 480 480 HOH HOH . P 7 HOH D 29 485 485 HOH HOH . P 7 HOH D 30 490 490 HOH HOH . P 7 HOH D 31 491 491 HOH HOH . P 7 HOH D 32 494 494 HOH HOH . P 7 HOH D 33 496 496 HOH HOH . P 7 HOH D 34 497 497 HOH HOH . P 7 HOH D 35 499 499 HOH HOH . P 7 HOH D 36 500 500 HOH HOH . P 7 HOH D 37 502 502 HOH HOH . P 7 HOH D 38 505 505 HOH HOH . P 7 HOH D 39 509 509 HOH HOH . P 7 HOH D 40 513 513 HOH HOH . P 7 HOH D 41 515 515 HOH HOH . P 7 HOH D 42 516 516 HOH HOH . P 7 HOH D 43 517 517 HOH HOH . P 7 HOH D 44 518 518 HOH HOH . P 7 HOH D 45 519 519 HOH HOH . P 7 HOH D 46 520 520 HOH HOH . P 7 HOH D 47 521 521 HOH HOH . P 7 HOH D 48 525 525 HOH HOH . P 7 HOH D 49 527 527 HOH HOH . P 7 HOH D 50 528 528 HOH HOH . P 7 HOH D 51 533 533 HOH HOH . P 7 HOH D 52 535 535 HOH HOH . P 7 HOH D 53 537 537 HOH HOH . P 7 HOH D 54 539 539 HOH HOH . P 7 HOH D 55 541 541 HOH HOH . P 7 HOH D 56 545 545 HOH HOH . P 7 HOH D 57 546 546 HOH HOH . P 7 HOH D 58 547 547 HOH HOH . P 7 HOH D 59 548 548 HOH HOH . P 7 HOH D 60 549 549 HOH HOH . P 7 HOH D 61 553 553 HOH HOH . P 7 HOH D 62 560 560 HOH HOH . P 7 HOH D 63 565 565 HOH HOH . P 7 HOH D 64 567 567 HOH HOH . P 7 HOH D 65 568 568 HOH HOH . P 7 HOH D 66 569 569 HOH HOH . P 7 HOH D 67 571 571 HOH HOH . P 7 HOH D 68 574 574 HOH HOH . P 7 HOH D 69 575 575 HOH HOH . P 7 HOH D 70 576 576 HOH HOH . P 7 HOH D 71 580 580 HOH HOH . P 7 HOH D 72 587 587 HOH HOH . P 7 HOH D 73 594 594 HOH HOH . P 7 HOH D 74 604 604 HOH HOH . P 7 HOH D 75 605 605 HOH HOH . P 7 HOH D 76 610 610 HOH HOH . P 7 HOH D 77 612 612 HOH HOH . P 7 HOH D 78 613 613 HOH HOH . P 7 HOH D 79 615 615 HOH HOH . P 7 HOH D 80 616 616 HOH HOH . P 7 HOH D 81 619 619 HOH HOH . P 7 HOH D 82 622 622 HOH HOH . P 7 HOH D 83 623 623 HOH HOH . P 7 HOH D 84 625 625 HOH HOH . P 7 HOH D 85 629 629 HOH HOH . P 7 HOH D 86 631 631 HOH HOH . P 7 HOH D 87 639 639 HOH HOH . P 7 HOH D 88 641 641 HOH HOH . P 7 HOH D 89 642 642 HOH HOH . P 7 HOH D 90 646 646 HOH HOH . P 7 HOH D 91 647 647 HOH HOH . P 7 HOH D 92 656 656 HOH HOH . P 7 HOH D 93 657 657 HOH HOH . P 7 HOH D 94 658 658 HOH HOH . P 7 HOH D 95 659 659 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . H 6 -1.131 -0.439 30.422 1 52.46 ? N1 UDP 407 B 1 HETATM 2 C C2 UDP . . . H 6 -1.358 -0.555 31.802 1 50.99 ? C2 UDP 407 B 1 HETATM 3 N N3 UDP . . . H 6 -2.607 -1.032 32.176 1 50.64 ? N3 UDP 407 B 1 HETATM 4 C C4 UDP . . . H 6 -3.665 -1.408 31.314 1 50.29 ? C4 UDP 407 B 1 HETATM 5 C C5 UDP . . . H 6 -3.382 -1.272 29.906 1 50.12 ? C5 UDP 407 B 1 HETATM 6 C C6 UDP . . . H 6 -2.167 -0.809 29.517 1 51.36 ? C6 UDP 407 B 1 HETATM 7 O O2 UDP . . . H 6 -0.509 -0.254 32.649 1 49.69 ? O2 UDP 407 B 1 HETATM 8 O O4 UDP . . . H 6 -4.711 -1.807 31.824 1 49.1 ? O4 UDP 407 B 1 HETATM 9 C C1' UDP . . . H 6 0.199 0.076 29.927 1 53.96 ? C1' UDP 407 B 1 HETATM 10 C C2' UDP . . . H 6 1.407 -0.859 30.119 1 54.41 ? C2' UDP 407 B 1 HETATM 11 O O2' UDP . . . H 6 2.591 -0.104 30.322 1 51.24 ? O2' UDP 407 B 1 HETATM 12 C C3' UDP . . . H 6 1.394 -1.648 28.803 1 55.76 ? C3' UDP 407 B 1 HETATM 13 C C4' UDP . . . H 6 1.115 -0.529 27.807 1 58.4 ? C4' UDP 407 B 1 HETATM 14 O O4' UDP . . . H 6 0.146 0.321 28.501 1 56.72 ? O4' UDP 407 B 1 HETATM 15 O O3' UDP . . . H 6 2.692 -2.206 28.606 1 54.56 ? O3' UDP 407 B 1 HETATM 16 C C5' UDP . . . H 6 0.498 -0.998 26.472 1 62.68 ? C5' UDP 407 B 1 HETATM 17 O O5' UDP . . . H 6 -0.492 -1.987 26.717 1 69.89 ? O5' UDP 407 B 1 HETATM 18 P PA UDP . . . H 6 -0.607 -3.518 26.337 1 74.4 ? PA UDP 407 B 1 HETATM 19 O O1A UDP . . . H 6 0.645 -4.196 26.791 1 74.03 ? O1A UDP 407 B 1 HETATM 20 O O2A UDP . . . H 6 -1.907 -4.038 26.882 1 74.18 ? O2A UDP 407 B 1 HETATM 21 O O3A UDP . . . H 6 -0.58 -3.299 24.748 1 77.76 ? O3A UDP 407 B 1 HETATM 22 P PB UDP . . . H 6 -0.087 -4.222 23.505 0.7 81.02 ? PB UDP 407 B 1 HETATM 23 O O1B UDP . . . H 6 -0.022 -5.754 24.075 0.7 79.55 ? O1B UDP 407 B 1 HETATM 24 O O2B UDP . . . H 6 -0.788 -3.853 22.278 0.7 79.51 ? O2B UDP 407 B 1 HETATM 25 O O3B UDP . . . H 6 1.386 -4.039 23.368 0.7 80.34 ? O3B UDP 407 B 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 25 #