data_1Q06 # _model_server_result.job_id XeVSIQzcTrq9d0tfXmHSWQ _model_server_result.datetime_utc '2025-01-06 21:00:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1Q06 # _exptl.entry_id 1Q06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 107.868 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SILVER ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Q06 _cell.length_a 59.516 _cell.length_b 66.583 _cell.length_c 81.821 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 112 A CYS 112 1_555 C AG AG . A AG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc2 A SG CYS 120 A CYS 120 1_555 C AG AG . A AG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc3 B SG CYS 112 B CYS 112 1_555 D AG AG . B AG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc4 B SG CYS 120 B CYS 120 1_555 D AG AG . B AG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'Ag 1' _chem_comp.formula_weight 107.868 _chem_comp.id AG _chem_comp.mon_nstd_flag . _chem_comp.name 'SILVER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Q06 _atom_sites.fract_transf_matrix[1][1] 0.016802 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AG A 1 301 301 AG AG . D 2 AG B 1 300 300 AG AG . E 3 HOH A 1 302 3 HOH WAT . E 3 HOH A 2 303 4 HOH WAT . E 3 HOH A 3 304 8 HOH WAT . E 3 HOH A 4 305 9 HOH WAT . E 3 HOH A 5 306 10 HOH WAT . E 3 HOH A 6 307 12 HOH WAT . E 3 HOH A 7 308 14 HOH WAT . E 3 HOH A 8 309 15 HOH WAT . E 3 HOH A 9 310 19 HOH WAT . E 3 HOH A 10 311 20 HOH WAT . E 3 HOH A 11 312 21 HOH WAT . E 3 HOH A 12 313 22 HOH WAT . E 3 HOH A 13 314 25 HOH WAT . E 3 HOH A 14 315 26 HOH WAT . E 3 HOH A 15 316 29 HOH WAT . E 3 HOH A 16 317 31 HOH WAT . E 3 HOH A 17 318 37 HOH WAT . E 3 HOH A 18 319 42 HOH WAT . E 3 HOH A 19 320 43 HOH WAT . E 3 HOH A 20 321 46 HOH WAT . E 3 HOH A 21 322 49 HOH WAT . E 3 HOH A 22 323 51 HOH WAT . E 3 HOH A 23 324 54 HOH WAT . E 3 HOH A 24 325 56 HOH WAT . E 3 HOH A 25 326 57 HOH WAT . E 3 HOH A 26 327 59 HOH WAT . E 3 HOH A 27 328 60 HOH WAT . E 3 HOH A 28 329 64 HOH WAT . E 3 HOH A 29 330 68 HOH WAT . E 3 HOH A 30 331 72 HOH WAT . E 3 HOH A 31 332 75 HOH WAT . E 3 HOH A 32 333 76 HOH WAT . E 3 HOH A 33 334 78 HOH WAT . E 3 HOH A 34 335 83 HOH WAT . E 3 HOH A 35 336 86 HOH WAT . E 3 HOH A 36 337 87 HOH WAT . E 3 HOH A 37 338 89 HOH WAT . E 3 HOH A 38 339 90 HOH WAT . E 3 HOH A 39 340 93 HOH WAT . E 3 HOH A 40 341 96 HOH WAT . E 3 HOH A 41 342 98 HOH WAT . E 3 HOH A 42 343 103 HOH WAT . E 3 HOH A 43 344 104 HOH WAT . E 3 HOH A 44 345 108 HOH WAT . E 3 HOH A 45 346 110 HOH WAT . E 3 HOH A 46 347 111 HOH WAT . E 3 HOH A 47 348 112 HOH WAT . E 3 HOH A 48 349 115 HOH WAT . E 3 HOH A 49 350 117 HOH WAT . E 3 HOH A 50 351 118 HOH WAT . E 3 HOH A 51 352 120 HOH WAT . E 3 HOH A 52 353 121 HOH WAT . E 3 HOH A 53 354 122 HOH WAT . E 3 HOH A 54 355 123 HOH WAT . E 3 HOH A 55 356 124 HOH WAT . E 3 HOH A 56 357 128 HOH WAT . E 3 HOH A 57 358 131 HOH WAT . E 3 HOH A 58 359 132 HOH WAT . E 3 HOH A 59 360 133 HOH WAT . F 3 HOH B 1 301 1 HOH WAT . F 3 HOH B 2 302 2 HOH WAT . F 3 HOH B 3 303 5 HOH WAT . F 3 HOH B 4 304 6 HOH WAT . F 3 HOH B 5 305 7 HOH WAT . F 3 HOH B 6 306 11 HOH WAT . F 3 HOH B 7 307 13 HOH WAT . F 3 HOH B 8 308 16 HOH WAT . F 3 HOH B 9 309 17 HOH WAT . F 3 HOH B 10 310 18 HOH WAT . F 3 HOH B 11 311 23 HOH WAT . F 3 HOH B 12 312 24 HOH WAT . F 3 HOH B 13 313 27 HOH WAT . F 3 HOH B 14 314 28 HOH WAT . F 3 HOH B 15 315 30 HOH WAT . F 3 HOH B 16 316 32 HOH WAT . F 3 HOH B 17 317 33 HOH WAT . F 3 HOH B 18 318 34 HOH WAT . F 3 HOH B 19 319 35 HOH WAT . F 3 HOH B 20 320 36 HOH WAT . F 3 HOH B 21 321 38 HOH WAT . F 3 HOH B 22 322 39 HOH WAT . F 3 HOH B 23 323 40 HOH WAT . F 3 HOH B 24 324 41 HOH WAT . F 3 HOH B 25 325 44 HOH WAT . F 3 HOH B 26 326 45 HOH WAT . F 3 HOH B 27 327 47 HOH WAT . F 3 HOH B 28 328 48 HOH WAT . F 3 HOH B 29 329 50 HOH WAT . F 3 HOH B 30 330 52 HOH WAT . F 3 HOH B 31 331 53 HOH WAT . F 3 HOH B 32 332 55 HOH WAT . F 3 HOH B 33 333 58 HOH WAT . F 3 HOH B 34 334 61 HOH WAT . F 3 HOH B 35 335 62 HOH WAT . F 3 HOH B 36 336 63 HOH WAT . F 3 HOH B 37 337 65 HOH WAT . F 3 HOH B 38 338 66 HOH WAT . F 3 HOH B 39 339 67 HOH WAT . F 3 HOH B 40 340 69 HOH WAT . F 3 HOH B 41 341 70 HOH WAT . F 3 HOH B 42 342 71 HOH WAT . F 3 HOH B 43 343 73 HOH WAT . F 3 HOH B 44 344 74 HOH WAT . F 3 HOH B 45 345 77 HOH WAT . F 3 HOH B 46 346 79 HOH WAT . F 3 HOH B 47 347 80 HOH WAT . F 3 HOH B 48 348 81 HOH WAT . F 3 HOH B 49 349 82 HOH WAT . F 3 HOH B 50 350 84 HOH WAT . F 3 HOH B 51 351 85 HOH WAT . F 3 HOH B 52 352 88 HOH WAT . F 3 HOH B 53 353 91 HOH WAT . F 3 HOH B 54 354 92 HOH WAT . F 3 HOH B 55 355 94 HOH WAT . F 3 HOH B 56 356 95 HOH WAT . F 3 HOH B 57 357 97 HOH WAT . F 3 HOH B 58 358 99 HOH WAT . F 3 HOH B 59 359 100 HOH WAT . F 3 HOH B 60 360 101 HOH WAT . F 3 HOH B 61 361 102 HOH WAT . F 3 HOH B 62 362 105 HOH WAT . F 3 HOH B 63 363 106 HOH WAT . F 3 HOH B 64 364 107 HOH WAT . F 3 HOH B 65 365 109 HOH WAT . F 3 HOH B 66 366 113 HOH WAT . F 3 HOH B 67 367 114 HOH WAT . F 3 HOH B 68 368 116 HOH WAT . F 3 HOH B 69 369 119 HOH WAT . F 3 HOH B 70 370 125 HOH WAT . F 3 HOH B 71 371 126 HOH WAT . F 3 HOH B 72 372 127 HOH WAT . F 3 HOH B 73 373 129 HOH WAT . F 3 HOH B 74 374 130 HOH WAT . F 3 HOH B 75 375 134 HOH WAT . F 3 HOH B 76 376 135 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AG _atom_site.label_atom_id AG _atom_site.label_comp_id AG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 76.649 _atom_site.Cartn_y 20.707 _atom_site.Cartn_z 78.149 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AG _atom_site.auth_comp_id AG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #