data_1Q3S # _model_server_result.job_id Z_wD0MuA6qmonvAEPoKKJA _model_server_result.datetime_utc '2025-07-31 04:24:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q3s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":6527}' # _entry.id 1Q3S # _exptl.entry_id 1Q3S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Q3S _cell.length_a 207.425 _cell.length_b 236.23 _cell.length_c 234.106 _cell.Z_PDB 64 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 207.425 0 117.053 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 T N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 95 A ASP 95 1_555 I MG MG . A MG 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc2 A OD2 ASP 95 A ASP 95 1_555 I MG MG . A MG 1527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc3 I MG MG . A MG 1527 1_555 J O3B ADP . A ADP 1528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc4 I MG MG . A MG 1527 1_555 J O1A ADP . A ADP 1528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc5 B OD2 ASP 95 B ASP 95 1_555 K MG MG . B MG 2527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc6 K MG MG . B MG 2527 1_555 L O1A ADP . B ADP 2528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc7 K MG MG . B MG 2527 1_555 L O3B ADP . B ADP 2528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc8 C OD1 ASP 95 C ASP 95 1_555 M MG MG . C MG 3527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? metalc ? metalc9 C OD2 ASP 95 C ASP 95 1_555 M MG MG . C MG 3527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc10 M MG MG . C MG 3527 1_555 N O3B ADP . C ADP 3528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc11 M MG MG . C MG 3527 1_555 N O1A ADP . C ADP 3528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc12 D OD2 ASP 95 D ASP 95 1_555 O MG MG . D MG 4527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc13 O MG MG . D MG 4527 1_555 P O1A ADP . D ADP 4528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc14 O MG MG . D MG 4527 1_555 P O3B ADP . D ADP 4528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc15 E OD2 ASP 95 E ASP 95 1_555 Q MG MG . E MG 5527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc16 Q MG MG . E MG 5527 1_555 R O3B ADP . E ADP 5528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc17 Q MG MG . E MG 5527 1_555 R O1A ADP . E ADP 5528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc18 G OD2 ASP 95 G ASP 95 1_555 T MG MG . G MG 6527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc19 G OD1 ASP 95 G ASP 95 1_555 T MG MG . G MG 6527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? metalc ? metalc20 T MG MG . G MG 6527 1_555 U O3B ADP . G ADP 7528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc21 T MG MG . G MG 6527 1_555 U O1A ADP . G ADP 7528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc22 H OD2 ASP 95 H ASP 95 1_555 V MG MG . H MG 8527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc23 V MG MG . H MG 8527 1_555 W O3B ADP . H ADP 8528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc24 V MG MG . H MG 8527 1_555 W O1A ADP . H ADP 8528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Q3S _atom_sites.fract_transf_matrix[1][1] 0.004821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004272 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 MG A 1 1527 1527 MG MG . J 3 ADP A 1 1528 1528 ADP ADP . K 2 MG B 1 2527 2527 MG MG . L 3 ADP B 1 2528 2528 ADP ADP . M 2 MG C 1 3527 3527 MG MG . N 3 ADP C 1 3528 3528 ADP ADP . O 2 MG D 1 4527 4527 MG MG . P 3 ADP D 1 4528 4528 ADP ADP . Q 2 MG E 1 5527 5527 MG MG . R 3 ADP E 1 5528 5528 ADP ADP . S 3 ADP F 1 6528 6528 ADP ADP . T 2 MG G 1 6527 6527 MG MG . U 3 ADP G 1 7528 7528 ADP ADP . V 2 MG H 1 8527 8527 MG MG . W 3 ADP H 1 8528 8528 ADP ADP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 2 _atom_site.Cartn_x 67.393 _atom_site.Cartn_y 112.951 _atom_site.Cartn_z 59.664 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 6527 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #