data_1Q8H # _model_server_result.job_id BzkLkF_1H6zXsdICMRXm6A _model_server_result.datetime_utc '2025-02-13 12:42:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":73}' # _entry.id 1Q8H # _exptl.entry_id 1Q8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1Q8H _cell.length_a 51.491 _cell.length_b 51.491 _cell.length_c 35.389 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_557 y,x,-z+2 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 70.778 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A C LEU 16 A LEU 16 1_555 A N CGU 17 A CGU 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CGU 17 A CGU 17 1_555 A N PRO 18 A PRO 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale3 A C ARG 20 A ARG 20 1_555 A N CGU 21 A CGU 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C CGU 21 A CGU 21 1_555 A N VAL 22 A VAL 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C CYS 23 A CYS 23 1_555 A N CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale6 A C CGU 24 A CGU 24 1_555 A N LEU 25 A LEU 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 B CA CA . A CA 71 1_555 E O HOH . A HOH 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc2 B CA CA . A CA 71 1_555 A OE11 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 B CA CA . A CA 71 1_555 A OE22 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc4 C CA CA . A CA 72 1_555 A OE11 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc5 C CA CA . A CA 72 1_555 A OD1 ASP 30 A ASP 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc6 C CA CA . A CA 72 1_555 A OE12 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc7 C CA CA . A CA 72 1_555 E O HOH . A HOH 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc8 C CA CA . A CA 72 1_555 E O HOH . A HOH 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc9 C CA CA . A CA 72 1_555 E O HOH . A HOH 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc10 D CA CA . A CA 73 1_555 A OE21 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc11 D CA CA . A CA 73 1_555 A OE22 CGU 24 A CGU 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc12 D CA CA . A CA 73 1_555 E O HOH . A HOH 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc13 D CA CA . A CA 73 1_555 A OE11 CGU 21 A CGU 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc14 B CA CA . A CA 71 1_555 A OE11 CGU 21 A CGU 21 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc15 B CA CA . A CA 71 1_555 A OE22 CGU 21 A CGU 21 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc16 B CA CA . A CA 71 1_555 A OE22 CGU 17 A CGU 17 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc17 B CA CA . A CA 71 1_555 A OE12 CGU 17 A CGU 17 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc18 C CA CA . A CA 72 1_555 A OE22 CGU 17 A CGU 17 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc19 C CA CA . A CA 72 1_555 A OE21 CGU 17 A CGU 17 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 3.153 ? metalc ? metalc20 D CA CA . A CA 73 1_555 A OE11 CGU 21 A CGU 21 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc21 D CA CA . A CA 73 1_555 A OE21 CGU 24 A CGU 24 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc22 D CA CA . A CA 73 1_555 A OE22 CGU 24 A CGU 24 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc23 D CA CA . A CA 73 1_555 E O HOH . A HOH 93 4_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Q8H _atom_sites.fract_transf_matrix[1][1] 0.019421 _atom_sites.fract_transf_matrix[1][2] 0.011213 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 71 71 CA CA . C 2 CA A 1 72 72 CA CA . D 2 CA A 1 73 73 CA CA . E 3 HOH A 1 74 1 HOH HOH . E 3 HOH A 2 75 2 HOH HOH . E 3 HOH A 3 76 3 HOH HOH . E 3 HOH A 4 77 4 HOH HOH . E 3 HOH A 5 78 5 HOH HOH . E 3 HOH A 6 79 6 HOH HOH . E 3 HOH A 7 80 7 HOH HOH . E 3 HOH A 8 81 8 HOH HOH . E 3 HOH A 9 82 9 HOH HOH . E 3 HOH A 10 83 10 HOH HOH . E 3 HOH A 11 84 11 HOH HOH . E 3 HOH A 12 85 12 HOH HOH . E 3 HOH A 13 86 13 HOH HOH . E 3 HOH A 14 87 14 HOH HOH . E 3 HOH A 15 88 15 HOH HOH . E 3 HOH A 16 89 16 HOH HOH . E 3 HOH A 17 90 17 HOH HOH . E 3 HOH A 18 91 18 HOH HOH . E 3 HOH A 19 92 19 HOH HOH . E 3 HOH A 20 93 20 HOH HOH . E 3 HOH A 21 94 21 HOH HOH . E 3 HOH A 22 95 22 HOH HOH . E 3 HOH A 23 96 23 HOH HOH . E 3 HOH A 24 97 24 HOH HOH . E 3 HOH A 25 98 25 HOH HOH . E 3 HOH A 26 99 26 HOH HOH . E 3 HOH A 27 100 27 HOH HOH . E 3 HOH A 28 101 28 HOH HOH . E 3 HOH A 29 102 29 HOH HOH . E 3 HOH A 30 103 30 HOH HOH . E 3 HOH A 31 104 31 HOH HOH . E 3 HOH A 32 105 33 HOH HOH . E 3 HOH A 33 106 34 HOH HOH . E 3 HOH A 34 107 35 HOH HOH . E 3 HOH A 35 108 36 HOH HOH . E 3 HOH A 36 109 37 HOH HOH . E 3 HOH A 37 110 38 HOH HOH . E 3 HOH A 38 111 39 HOH HOH . E 3 HOH A 39 112 40 HOH HOH . E 3 HOH A 40 113 41 HOH HOH . E 3 HOH A 41 114 42 HOH HOH . E 3 HOH A 42 115 43 HOH HOH . E 3 HOH A 43 116 44 HOH HOH . E 3 HOH A 44 117 45 HOH HOH . E 3 HOH A 45 118 46 HOH HOH . E 3 HOH A 46 119 47 HOH HOH . E 3 HOH A 47 120 48 HOH HOH . E 3 HOH A 48 121 49 HOH HOH . E 3 HOH A 49 122 50 HOH HOH . E 3 HOH A 50 123 51 HOH HOH . E 3 HOH A 51 124 52 HOH HOH . E 3 HOH A 52 125 53 HOH HOH . E 3 HOH A 53 126 54 HOH HOH . E 3 HOH A 54 127 55 HOH HOH . E 3 HOH A 55 128 56 HOH HOH . E 3 HOH A 56 129 57 HOH HOH . E 3 HOH A 57 130 58 HOH HOH . E 3 HOH A 58 131 59 HOH HOH . E 3 HOH A 59 132 60 HOH HOH . E 3 HOH A 60 133 63 HOH HOH . E 3 HOH A 61 134 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.897 _atom_site.Cartn_y 18.813 _atom_site.Cartn_z 35.385 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 50.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 73 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #