data_1Q8T # _model_server_result.job_id Y5TQQ5QNX4hRvlu8ONP52A _model_server_result.datetime_utc '2024-11-23 22:23:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q8t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":930}' # _entry.id 1Q8T # _exptl.entry_id 1Q8T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.336 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Q8T _cell.length_a 74.027 _cell.length_b 76.606 _cell.length_c 80.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q8T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SEP 10 A SEP 10 1_555 A N GLU 11 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C14 H21 N3 O' _chem_comp.formula_weight 247.336 _chem_comp.id Y27 _chem_comp.mon_nstd_flag . _chem_comp.name '(R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 C22 Y27 doub 415 n n C22 C31 Y27 sing 416 n n C22 N21 Y27 sing 417 n n C31 C36 Y27 sing 418 n n C31 C32 Y27 sing 419 n n C31 H31 Y27 sing 420 n n C36 C35 Y27 sing 421 n n C36 H361 Y27 sing 422 n n C36 H362 Y27 sing 423 n n C35 C34 Y27 sing 424 n n C35 H351 Y27 sing 425 n n C35 H352 Y27 sing 426 n n C34 C33 Y27 sing 427 n n C34 C41 Y27 sing 428 n n C34 H34 Y27 sing 429 n n C33 C32 Y27 sing 430 n n C33 H331 Y27 sing 431 n n C33 H332 Y27 sing 432 n n C32 H321 Y27 sing 433 n n C32 H322 Y27 sing 434 n n C41 C42 Y27 sing 435 n n C41 N43 Y27 sing 436 n n C41 H41 Y27 sing 437 n n C42 H421 Y27 sing 438 n n C42 H422 Y27 sing 439 n n C42 H423 Y27 sing 440 n n N43 H431 Y27 sing 441 n n N43 H432 Y27 sing 442 n n N21 C14 Y27 sing 443 n n N21 H21 Y27 sing 444 n n C14 C15 Y27 doub 445 n y C14 C13 Y27 sing 446 n y C15 C16 Y27 sing 447 n y C15 H15 Y27 sing 448 n n C16 N11 Y27 doub 449 n y C16 H16 Y27 sing 450 n n N11 C12 Y27 sing 451 n y C12 C13 Y27 doub 452 n y C12 H12 Y27 sing 453 n n C13 H13 Y27 sing 454 n n # _atom_sites.entry_id 1Q8T _atom_sites.fract_transf_matrix[1][1] 0.013509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 Y27 A 1 930 1 Y27 Y27 . D 4 HOH A 1 931 2 HOH HOH . D 4 HOH A 2 932 4 HOH HOH . D 4 HOH A 3 933 5 HOH HOH . D 4 HOH A 4 934 6 HOH HOH . D 4 HOH A 5 935 8 HOH HOH . D 4 HOH A 6 936 9 HOH HOH . D 4 HOH A 7 937 11 HOH HOH . D 4 HOH A 8 938 12 HOH HOH . D 4 HOH A 9 939 13 HOH HOH . D 4 HOH A 10 940 15 HOH HOH . D 4 HOH A 11 941 16 HOH HOH . D 4 HOH A 12 942 18 HOH HOH . D 4 HOH A 13 943 20 HOH HOH . D 4 HOH A 14 944 22 HOH HOH . D 4 HOH A 15 945 23 HOH HOH . D 4 HOH A 16 946 25 HOH HOH . D 4 HOH A 17 947 27 HOH HOH . D 4 HOH A 18 948 30 HOH HOH . D 4 HOH A 19 949 32 HOH HOH . D 4 HOH A 20 950 34 HOH HOH . D 4 HOH A 21 951 36 HOH HOH . D 4 HOH A 22 952 37 HOH HOH . D 4 HOH A 23 953 38 HOH HOH . D 4 HOH A 24 954 39 HOH HOH . D 4 HOH A 25 955 40 HOH HOH . D 4 HOH A 26 956 43 HOH HOH . D 4 HOH A 27 957 45 HOH HOH . D 4 HOH A 28 958 47 HOH HOH . D 4 HOH A 29 959 48 HOH HOH . D 4 HOH A 30 960 50 HOH HOH . D 4 HOH A 31 961 52 HOH HOH . D 4 HOH A 32 962 53 HOH HOH . D 4 HOH A 33 963 54 HOH HOH . D 4 HOH A 34 964 55 HOH HOH . D 4 HOH A 35 965 57 HOH HOH . D 4 HOH A 36 966 59 HOH HOH . D 4 HOH A 37 967 101 HOH HOH . D 4 HOH A 38 968 103 HOH HOH . D 4 HOH A 39 969 104 HOH HOH . D 4 HOH A 40 970 105 HOH HOH . D 4 HOH A 41 971 106 HOH HOH . D 4 HOH A 42 972 108 HOH HOH . D 4 HOH A 43 973 109 HOH HOH . D 4 HOH A 44 974 110 HOH HOH . D 4 HOH A 45 975 111 HOH HOH . D 4 HOH A 46 976 112 HOH HOH . D 4 HOH A 47 977 113 HOH HOH . D 4 HOH A 48 978 115 HOH HOH . D 4 HOH A 49 979 118 HOH HOH . D 4 HOH A 50 980 119 HOH HOH . D 4 HOH A 51 981 121 HOH HOH . D 4 HOH A 52 982 122 HOH HOH . D 4 HOH A 53 983 123 HOH HOH . D 4 HOH A 54 984 124 HOH HOH . D 4 HOH A 55 985 126 HOH HOH . D 4 HOH A 56 986 127 HOH HOH . D 4 HOH A 57 987 128 HOH HOH . D 4 HOH A 58 988 132 HOH HOH . D 4 HOH A 59 989 134 HOH HOH . D 4 HOH A 60 990 135 HOH HOH . D 4 HOH A 61 991 136 HOH HOH . D 4 HOH A 62 992 137 HOH HOH . D 4 HOH A 63 993 141 HOH HOH . D 4 HOH A 64 994 146 HOH HOH . D 4 HOH A 65 995 147 HOH HOH . D 4 HOH A 66 996 271 HOH HOH . D 4 HOH A 67 997 281 HOH HOH . D 4 HOH A 68 998 225 HOH HOH . D 4 HOH A 69 999 232 HOH HOH . D 4 HOH A 70 1000 235 HOH HOH . D 4 HOH A 71 1001 239 HOH HOH . D 4 HOH A 72 1002 241 HOH HOH . D 4 HOH A 73 1003 242 HOH HOH . D 4 HOH A 74 1004 250 HOH HOH . D 4 HOH A 75 1005 259 HOH HOH . D 4 HOH A 76 1006 264 HOH HOH . D 4 HOH A 77 1007 265 HOH HOH . D 4 HOH A 78 1008 266 HOH HOH . D 4 HOH A 79 1009 294 HOH HOH . D 4 HOH A 80 1010 216 HOH HOH . D 4 HOH A 81 1011 219 HOH HOH . D 4 HOH A 82 1012 229 HOH HOH . D 4 HOH A 83 1013 301 HOH HOH . D 4 HOH A 84 1014 233 HOH HOH . D 4 HOH A 85 1015 234 HOH HOH . D 4 HOH A 86 1016 302 HOH HOH . D 4 HOH A 87 1017 237 HOH HOH . D 4 HOH A 88 1018 238 HOH HOH . D 4 HOH A 89 1019 240 HOH HOH . D 4 HOH A 90 1020 243 HOH HOH . D 4 HOH A 91 1021 244 HOH HOH . D 4 HOH A 92 1022 245 HOH HOH . D 4 HOH A 93 1023 246 HOH HOH . D 4 HOH A 94 1024 442 HOH HOH . D 4 HOH A 95 1025 445 HOH HOH . D 4 HOH A 96 1026 449 HOH HOH . D 4 HOH A 97 1027 512 HOH HOH . D 4 HOH A 98 1028 519 HOH HOH . D 4 HOH A 99 1029 522 HOH HOH . D 4 HOH A 100 1030 523 HOH HOH . D 4 HOH A 101 1031 528 HOH HOH . D 4 HOH A 102 1032 551 HOH HOH . D 4 HOH A 103 1033 556 HOH HOH . D 4 HOH A 104 1034 600 HOH HOH . D 4 HOH A 105 1035 613 HOH HOH . D 4 HOH A 106 1036 612 HOH HOH . D 4 HOH A 107 1037 614 HOH HOH . D 4 HOH A 108 1038 602 HOH HOH . D 4 HOH A 109 1039 701 HOH HOH . D 4 HOH A 110 1040 703 HOH HOH . D 4 HOH A 111 1041 704 HOH HOH . D 4 HOH A 112 1042 705 HOH HOH . D 4 HOH A 113 1043 706 HOH HOH . D 4 HOH A 114 1044 707 HOH HOH . D 4 HOH A 115 1045 711 HOH HOH . D 4 HOH A 116 1046 713 HOH HOH . D 4 HOH A 117 1047 717 HOH HOH . D 4 HOH A 118 1048 719 HOH HOH . D 4 HOH A 119 1049 721 HOH HOH . D 4 HOH A 120 1050 722 HOH HOH . D 4 HOH A 121 1051 723 HOH HOH . D 4 HOH A 122 1052 724 HOH HOH . D 4 HOH A 123 1053 725 HOH HOH . D 4 HOH A 124 1054 726 HOH HOH . D 4 HOH A 125 1055 729 HOH HOH . D 4 HOH A 126 1056 731 HOH HOH . D 4 HOH A 127 1057 733 HOH HOH . D 4 HOH A 128 1058 735 HOH HOH . D 4 HOH A 129 1059 737 HOH HOH . D 4 HOH A 130 1060 739 HOH HOH . D 4 HOH A 131 1061 740 HOH HOH . D 4 HOH A 132 1062 743 HOH HOH . D 4 HOH A 133 1063 744 HOH HOH . D 4 HOH A 134 1064 747 HOH HOH . D 4 HOH A 135 1065 748 HOH HOH . D 4 HOH A 136 1066 751 HOH HOH . D 4 HOH A 137 1067 753 HOH HOH . D 4 HOH A 138 1068 759 HOH HOH . D 4 HOH A 139 1069 762 HOH HOH . D 4 HOH A 140 1070 764 HOH HOH . D 4 HOH A 141 1071 765 HOH HOH . D 4 HOH A 142 1072 766 HOH HOH . D 4 HOH A 143 1073 767 HOH HOH . D 4 HOH A 144 1074 768 HOH HOH . D 4 HOH A 145 1075 771 HOH HOH . D 4 HOH A 146 1076 773 HOH HOH . D 4 HOH A 147 1077 774 HOH HOH . D 4 HOH A 148 1078 775 HOH HOH . D 4 HOH A 149 1079 776 HOH HOH . D 4 HOH A 150 1080 783 HOH HOH . D 4 HOH A 151 1081 786 HOH HOH . D 4 HOH A 152 1082 787 HOH HOH . D 4 HOH A 153 1083 789 HOH HOH . D 4 HOH A 154 1084 794 HOH HOH . D 4 HOH A 155 1085 795 HOH HOH . D 4 HOH A 156 1086 796 HOH HOH . D 4 HOH A 157 1087 800 HOH HOH . D 4 HOH A 158 1088 802 HOH HOH . D 4 HOH A 159 1089 803 HOH HOH . D 4 HOH A 160 1090 804 HOH HOH . D 4 HOH A 161 1091 809 HOH HOH . D 4 HOH A 162 1092 810 HOH HOH . D 4 HOH A 163 1093 811 HOH HOH . D 4 HOH A 164 1094 812 HOH HOH . D 4 HOH A 165 1095 813 HOH HOH . D 4 HOH A 166 1096 815 HOH HOH . D 4 HOH A 167 1097 816 HOH HOH . D 4 HOH A 168 1098 823 HOH HOH . D 4 HOH A 169 1099 824 HOH HOH . D 4 HOH A 170 1100 826 HOH HOH . D 4 HOH A 171 1101 832 HOH HOH . D 4 HOH A 172 1102 834 HOH HOH . D 4 HOH A 173 1103 836 HOH HOH . D 4 HOH A 174 1104 838 HOH HOH . D 4 HOH A 175 1105 842 HOH HOH . D 4 HOH A 176 1106 843 HOH HOH . D 4 HOH A 177 1107 844 HOH HOH . D 4 HOH A 178 1108 846 HOH HOH . D 4 HOH A 179 1109 847 HOH HOH . D 4 HOH A 180 1110 848 HOH HOH . D 4 HOH A 181 1111 852 HOH HOH . D 4 HOH A 182 1112 853 HOH HOH . D 4 HOH A 183 1113 859 HOH HOH . D 4 HOH A 184 1114 862 HOH HOH . D 4 HOH A 185 1115 864 HOH HOH . D 4 HOH A 186 1116 868 HOH HOH . D 4 HOH A 187 1117 871 HOH HOH . D 4 HOH A 188 1118 872 HOH HOH . D 4 HOH A 189 1119 874 HOH HOH . D 4 HOH A 190 1120 876 HOH HOH . D 4 HOH A 191 1121 878 HOH HOH . D 4 HOH A 192 1122 909 HOH HOH . D 4 HOH A 193 1123 918 HOH HOH . D 4 HOH A 194 1124 926 HOH HOH . D 4 HOH A 195 1125 927 HOH HOH . D 4 HOH A 196 1126 928 HOH HOH . E 4 HOH B 1 25 1 HOH HOH . E 4 HOH B 2 26 14 HOH HOH . E 4 HOH B 3 27 19 HOH HOH . E 4 HOH B 4 28 21 HOH HOH . E 4 HOH B 5 29 28 HOH HOH . E 4 HOH B 6 30 41 HOH HOH . E 4 HOH B 7 31 51 HOH HOH . E 4 HOH B 8 32 116 HOH HOH . E 4 HOH B 9 33 120 HOH HOH . E 4 HOH B 10 34 133 HOH HOH . E 4 HOH B 11 35 149 HOH HOH . E 4 HOH B 12 36 300 HOH HOH . E 4 HOH B 13 37 507 HOH HOH . E 4 HOH B 14 38 702 HOH HOH . E 4 HOH B 15 39 708 HOH HOH . E 4 HOH B 16 40 716 HOH HOH . E 4 HOH B 17 41 720 HOH HOH . E 4 HOH B 18 42 746 HOH HOH . E 4 HOH B 19 43 750 HOH HOH . E 4 HOH B 20 44 784 HOH HOH . E 4 HOH B 21 45 831 HOH HOH . E 4 HOH B 22 46 837 HOH HOH . E 4 HOH B 23 47 840 HOH HOH . E 4 HOH B 24 48 885 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 Y27 . . . C 3 7.567 9.649 1.659 1 40.69 ? O23 Y27 930 A 1 HETATM 2 C C22 Y27 . . . C 3 7.985 9.482 2.808 1 38.49 ? C22 Y27 930 A 1 HETATM 3 C C31 Y27 . . . C 3 9.39 9.033 3.122 1 37.38 ? C31 Y27 930 A 1 HETATM 4 C C36 Y27 . . . C 3 9.802 7.926 2.147 1 40.63 ? C36 Y27 930 A 1 HETATM 5 C C35 Y27 . . . C 3 11.177 7.372 2.533 1 40.85 ? C35 Y27 930 A 1 HETATM 6 C C34 Y27 . . . C 3 12.191 8.5 2.307 1 40.96 ? C34 Y27 930 A 1 HETATM 7 C C33 Y27 . . . C 3 11.885 9.672 3.277 1 41.71 ? C33 Y27 930 A 1 HETATM 8 C C32 Y27 . . . C 3 10.41 10.189 3.138 1 42.13 ? C32 Y27 930 A 1 HETATM 9 C C41 Y27 . . . C 3 13.635 7.916 2.377 1 43.23 ? C41 Y27 930 A 1 HETATM 10 C C42 Y27 . . . C 3 14.009 7.234 1.048 1 40.9 ? C42 Y27 930 A 1 HETATM 11 N N43 Y27 . . . C 3 14.651 8.984 2.688 1 44.74 ? N43 Y27 930 A 1 HETATM 12 N N21 Y27 . . . C 3 7.175 9.668 3.963 1 34.8 ? N21 Y27 930 A 1 HETATM 13 C C14 Y27 . . . C 3 5.735 9.742 4.01 1 33.61 ? C14 Y27 930 A 1 HETATM 14 C C15 Y27 . . . C 3 5.165 9.693 5.293 1 30.98 ? C15 Y27 930 A 1 HETATM 15 C C16 Y27 . . . C 3 3.77 9.746 5.348 1 31.03 ? C16 Y27 930 A 1 HETATM 16 N N11 Y27 . . . C 3 3.01 9.854 4.238 1 27.32 ? N11 Y27 930 A 1 HETATM 17 C C12 Y27 . . . C 3 3.541 9.901 3.006 1 33.37 ? C12 Y27 930 A 1 HETATM 18 C C13 Y27 . . . C 3 4.918 9.844 2.847 1 31.33 ? C13 Y27 930 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 18 #