data_1Q90 # _model_server_result.job_id KW3ZFWuQCZ_KSc37dFo7Ew _model_server_result.datetime_utc '2024-11-21 14:14:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":953}' # _entry.id 1Q90 # _exptl.entry_id 1Q90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 787.158 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Q90 _cell.length_a 102.454 _cell.length_b 171.205 _cell.length_c 351.009 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA octadecameric 18 author_and_software_defined_assembly 1 PISA,PQS 36-meric 36 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 102.454 342.41 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.454 0 351.009 4 'crystal symmetry operation' 4_576 x,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 342.41 351.009 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 16 S N N ? 16 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 60 C CYS 139 1_555 C SG CYS 75 C CYS 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A SG CYS 21 A CYS 21 1_555 J CAB HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? covale ? covale2 A SG CYS 24 A CYS 24 1_555 J CAC HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? covale ? covale3 B SG CYS 35 B CYS 35 1_555 K CAB HEC . B HEC 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? metalc ? metalc1 A N TYR 1 A TYR 1 1_555 J FE HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc2 A NE2 HIS 25 A HIS 25 1_555 J FE HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc3 B NE2 HIS 86 B HIS 86 1_555 M FE HEC . B HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc4 B NE2 HIS 100 B HIS 100 1_555 L FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 B NE2 HIS 187 B HIS 187 1_555 M FE HEC . B HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc6 B NE2 HIS 202 B HIS 202 1_555 L FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc7 K FE HEC . B HEC 903 1_555 V O HOH . B HOH 963 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc8 C SG CYS 55 C CYS 134 1_555 P FE2 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc9 C ND1 HIS 57 C HIS 136 1_555 P FE1 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc10 C SG CYS 73 C CYS 152 1_555 P FE2 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc11 C ND1 HIS 76 C HIS 155 1_555 P FE1 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? # _chem_comp.formula 'C45 H86 O10' _chem_comp.formula_weight 787.158 _chem_comp.id LMG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 LMG sing 585 n n C1 C2 LMG sing 586 n n C1 O6 LMG sing 587 n n C1 HC1 LMG sing 588 n n O1 C7 LMG sing 589 n n C2 O2 LMG sing 590 n n C2 C3 LMG sing 591 n n C2 HC2 LMG sing 592 n n O2 HO2 LMG sing 593 n n C3 O3 LMG sing 594 n n C3 C4 LMG sing 595 n n C3 HC3 LMG sing 596 n n O3 HO3 LMG sing 597 n n C4 O4 LMG sing 598 n n C4 C5 LMG sing 599 n n C4 HC4 LMG sing 600 n n O4 HO4 LMG sing 601 n n C5 C6 LMG sing 602 n n C5 O6 LMG sing 603 n n C5 HC5 LMG sing 604 n n O5 C6 LMG sing 605 n n O5 HO5 LMG sing 606 n n C6 HC61 LMG sing 607 n n C6 HC62 LMG sing 608 n n C7 C8 LMG sing 609 n n C7 HC71 LMG sing 610 n n C7 HC72 LMG sing 611 n n C8 C9 LMG sing 612 n n C8 O7 LMG sing 613 n n C8 HC8 LMG sing 614 n n C9 O8 LMG sing 615 n n C9 HC91 LMG sing 616 n n C9 HC92 LMG sing 617 n n O7 C10 LMG sing 618 n n C10 O9 LMG doub 619 n n C10 C11 LMG sing 620 n n C11 C12 LMG sing 621 n n C11 H111 LMG sing 622 n n C11 H112 LMG sing 623 n n C12 C13 LMG sing 624 n n C12 H121 LMG sing 625 n n C12 H122 LMG sing 626 n n C13 C14 LMG sing 627 n n C13 H131 LMG sing 628 n n C13 H132 LMG sing 629 n n C14 C15 LMG sing 630 n n C14 H141 LMG sing 631 n n C14 H142 LMG sing 632 n n C15 C16 LMG sing 633 n n C15 H151 LMG sing 634 n n C15 H152 LMG sing 635 n n C16 C17 LMG sing 636 n n C16 H161 LMG sing 637 n n C16 H162 LMG sing 638 n n C17 C18 LMG sing 639 n n C17 H171 LMG sing 640 n n C17 H172 LMG sing 641 n n C18 C19 LMG sing 642 n n C18 H181 LMG sing 643 n n C18 H182 LMG sing 644 n n C19 C20 LMG sing 645 n n C19 H191 LMG sing 646 n n C19 H192 LMG sing 647 n n C20 C21 LMG sing 648 n n C20 H201 LMG sing 649 n n C20 H202 LMG sing 650 n n C21 C22 LMG sing 651 n n C21 H211 LMG sing 652 n n C21 H212 LMG sing 653 n n C22 C23 LMG sing 654 n n C22 H221 LMG sing 655 n n C22 H222 LMG sing 656 n n C23 C24 LMG sing 657 n n C23 H231 LMG sing 658 n n C23 H232 LMG sing 659 n n C24 C25 LMG sing 660 n n C24 H241 LMG sing 661 n n C24 H242 LMG sing 662 n n C25 C26 LMG sing 663 n n C25 H251 LMG sing 664 n n C25 H252 LMG sing 665 n n C26 C27 LMG sing 666 n n C26 H261 LMG sing 667 n n C26 H262 LMG sing 668 n n C27 H271 LMG sing 669 n n C27 H272 LMG sing 670 n n C27 H273 LMG sing 671 n n O8 C28 LMG sing 672 n n C28 O10 LMG doub 673 n n C28 C29 LMG sing 674 n n C29 C30 LMG sing 675 n n C29 H291 LMG sing 676 n n C29 H292 LMG sing 677 n n C30 C31 LMG sing 678 n n C30 H301 LMG sing 679 n n C30 H302 LMG sing 680 n n C31 C32 LMG sing 681 n n C31 H311 LMG sing 682 n n C31 H312 LMG sing 683 n n C32 C33 LMG sing 684 n n C32 H321 LMG sing 685 n n C32 H322 LMG sing 686 n n C33 C34 LMG sing 687 n n C33 H331 LMG sing 688 n n C33 H332 LMG sing 689 n n C34 C35 LMG sing 690 n n C34 H341 LMG sing 691 n n C34 H342 LMG sing 692 n n C35 C36 LMG sing 693 n n C35 H351 LMG sing 694 n n C35 H352 LMG sing 695 n n C36 C37 LMG sing 696 n n C36 H361 LMG sing 697 n n C36 H362 LMG sing 698 n n C37 C38 LMG sing 699 n n C37 H371 LMG sing 700 n n C37 H372 LMG sing 701 n n C38 C39 LMG sing 702 n n C38 H381 LMG sing 703 n n C38 H382 LMG sing 704 n n C39 C40 LMG sing 705 n n C39 H391 LMG sing 706 n n C39 H392 LMG sing 707 n n C40 C41 LMG sing 708 n n C40 H401 LMG sing 709 n n C40 H402 LMG sing 710 n n C41 C42 LMG sing 711 n n C41 H411 LMG sing 712 n n C41 H412 LMG sing 713 n n C42 C43 LMG sing 714 n n C42 H421 LMG sing 715 n n C42 H422 LMG sing 716 n n C43 C44 LMG sing 717 n n C43 H431 LMG sing 718 n n C43 H432 LMG sing 719 n n C44 C45 LMG sing 720 n n C44 H441 LMG sing 721 n n C44 H442 LMG sing 722 n n C45 H451 LMG sing 723 n n C45 H452 LMG sing 724 n n C45 H453 LMG sing 725 n n # _atom_sites.entry_id 1Q90 _atom_sites.fract_transf_matrix[1][1] 0.00976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 10 HEC A 1 900 900 HEC HEM . K 10 HEC B 1 903 903 HEC HEM . L 10 HEC B 1 901 901 HEC HEM . M 10 HEC B 1 902 902 HEC HEM . N 11 BCR B 1 904 904 BCR BCR . O 12 LFA B 1 960 960 LFA LFA . P 13 FES C 1 210 210 FES FES . Q 14 CLA D 1 910 910 CLA CLA . R 15 TDS D 1 920 920 TDS TDS . S 16 LMG D 1 953 953 LMG LMG . T 17 SQD R 1 950 950 SQD SQD . U 16 LMG L 1 951 951 LMG LMG . V 18 HOH B 1 961 961 HOH HOH . V 18 HOH B 2 963 963 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMG . . . S 16 35.04 135.885 121.371 1 107.51 ? C1 LMG 953 D 1 HETATM 2 O O1 LMG . . . S 16 34.891 136.352 122.713 1 107.51 ? O1 LMG 953 D 1 HETATM 3 C C2 LMG . . . S 16 33.769 135.104 120.962 1 107.51 ? C2 LMG 953 D 1 HETATM 4 O O2 LMG . . . S 16 33.568 134.033 121.863 1 107.51 ? O2 LMG 953 D 1 HETATM 5 C C3 LMG . . . S 16 33.925 134.58 119.465 1 107.51 ? C3 LMG 953 D 1 HETATM 6 O O3 LMG . . . S 16 32.767 133.848 119.04 1 107.51 ? O3 LMG 953 D 1 HETATM 7 C C4 LMG . . . S 16 34.157 135.793 118.488 1 107.51 ? C4 LMG 953 D 1 HETATM 8 O O4 LMG . . . S 16 32.981 136.612 118.402 1 107.51 ? O4 LMG 953 D 1 HETATM 9 C C5 LMG . . . S 16 35.444 136.611 118.991 1 107.51 ? C5 LMG 953 D 1 HETATM 10 O O5 LMG . . . S 16 35.567 137.571 116.669 1 107.51 ? O5 LMG 953 D 1 HETATM 11 C C6 LMG . . . S 16 35.71 137.853 118.082 1 107.51 ? C6 LMG 953 D 1 HETATM 12 O O6 LMG . . . S 16 35.274 137.025 120.429 1 107.51 ? O6 LMG 953 D 1 HETATM 13 C C7 LMG . . . S 16 35.838 137.184 123.333 1 107.51 ? C7 LMG 953 D 1 HETATM 14 C C8 LMG . . . S 16 35.554 137.324 124.845 1 107.51 ? C8 LMG 953 D 1 HETATM 15 C C9 LMG . . . S 16 35.649 135.954 125.611 1 107.51 ? C9 LMG 953 D 1 HETATM 16 O O7 LMG . . . S 16 36.482 138.2 125.485 1 107.51 ? O7 LMG 953 D 1 HETATM 17 C C10 LMG . . . S 16 35.957 139.104 126.455 1 107.51 ? C10 LMG 953 D 1 HETATM 18 O O9 LMG . . . S 16 34.726 139.125 126.738 1 88.41 ? O9 LMG 953 D 1 HETATM 19 C C11 LMG . . . S 16 36.942 140.054 127.158 1 107.51 ? C11 LMG 953 D 1 HETATM 20 C C12 LMG . . . S 16 36.097 140.847 128.174 1 107.51 ? C12 LMG 953 D 1 HETATM 21 C C13 LMG . . . S 16 36.797 141.86 129.026 1 107.51 ? C13 LMG 953 D 1 HETATM 22 C C14 LMG . . . S 16 35.698 142.444 129.886 1 107.51 ? C14 LMG 953 D 1 HETATM 23 C C15 LMG . . . S 16 36.263 143.476 130.807 1 88.41 ? C15 LMG 953 D 1 HETATM 24 C C16 LMG . . . S 16 35.321 143.603 131.979 1 88.41 ? C16 LMG 953 D 1 HETATM 25 C C17 LMG . . . S 16 35.695 144.864 132.692 1 88.41 ? C17 LMG 953 D 1 HETATM 26 C C18 LMG . . . S 16 35.961 144.559 134.14 1 88.41 ? C18 LMG 953 D 1 HETATM 27 C C19 LMG . . . S 16 34.978 145.282 134.988 1 88.41 ? C19 LMG 953 D 1 HETATM 28 C C20 LMG . . . S 16 35.267 144.949 136.425 1 88.41 ? C20 LMG 953 D 1 HETATM 29 C C21 LMG . . . S 16 34.244 145.703 137.228 1 88.41 ? C21 LMG 953 D 1 HETATM 30 C C22 LMG . . . S 16 34.435 145.439 138.692 1 88.41 ? C22 LMG 953 D 1 HETATM 31 C C23 LMG . . . S 16 33.373 146.223 139.481 1 88.41 ? C23 LMG 953 D 1 HETATM 32 C C24 LMG . . . S 16 32.376 145.262 140.154 1 88.41 ? C24 LMG 953 D 1 HETATM 33 C C25 LMG . . . S 16 31.321 146.044 140.922 1 88.41 ? C25 LMG 953 D 1 HETATM 34 O O8 LMG . . . S 16 35.762 136.12 127.053 1 107.51 ? O8 LMG 953 D 1 HETATM 35 C C28 LMG . . . S 16 35.863 134.989 127.938 1 107.51 ? C28 LMG 953 D 1 HETATM 36 O O10 LMG . . . S 16 35.854 133.838 127.49 1 107.51 ? O10 LMG 953 D 1 HETATM 37 C C29 LMG . . . S 16 35.993 135.156 129.468 1 107.51 ? C29 LMG 953 D 1 HETATM 38 C C30 LMG . . . S 16 36.123 134.219 130.688 1 107.51 ? C30 LMG 953 D 1 HETATM 39 C C31 LMG . . . S 16 36.403 135.008 131.994 1 88.41 ? C31 LMG 953 D 1 HETATM 40 C C32 LMG . . . S 16 35.994 134.17 133.232 1 88.41 ? C32 LMG 953 D 1 HETATM 41 C C33 LMG . . . S 16 36.309 134.925 134.557 1 88.41 ? C33 LMG 953 D 1 HETATM 42 C C34 LMG . . . S 16 35.024 135.399 135.262 1 88.41 ? C34 LMG 953 D 1 HETATM 43 C C35 LMG . . . S 16 35.368 136.156 136.571 1 88.41 ? C35 LMG 953 D 1 HETATM 44 C C36 LMG . . . S 16 34.045 136.621 137.244 1 88.41 ? C36 LMG 953 D 1 HETATM 45 C C37 LMG . . . S 16 34.269 137.42 138.567 1 88.41 ? C37 LMG 953 D 1 HETATM 46 C C38 LMG . . . S 16 34.323 136.49 139.805 1 88.41 ? C38 LMG 953 D 1 HETATM 47 C C39 LMG . . . S 16 34.53 137.294 141.099 1 88.41 ? C39 LMG 953 D 1 HETATM 48 C C40 LMG . . . S 16 34.608 136.288 142.251 1 88.41 ? C40 LMG 953 D 1 HETATM 49 C C41 LMG . . . S 16 34.833 136.959 143.617 1 88.41 ? C41 LMG 953 D 1 HETATM 50 C C42 LMG . . . S 16 34.924 135.838 144.689 1 88.41 ? C42 LMG 953 D 1 HETATM 51 C C43 LMG . . . S 16 33.847 135.971 145.794 1 88.41 ? C43 LMG 953 D 1 HETATM 52 C C44 LMG . . . S 16 34.316 135.372 147.128 1 88.41 ? C44 LMG 953 D 1 HETATM 53 C C45 LMG . . . S 16 33.226 135.519 148.197 1 88.41 ? C45 LMG 953 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #