data_1Q90 # _model_server_result.job_id NLwQ6plMj7esEkgBGOTtSg _model_server_result.datetime_utc '2025-03-04 21:35:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1q90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":960}' # _entry.id 1Q90 # _exptl.entry_id 1Q90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Q90 _cell.length_a 102.454 _cell.length_b 171.205 _cell.length_c 351.009 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Q90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA octadecameric 18 author_and_software_defined_assembly 1 PISA,PQS 36-meric 36 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 102.454 342.41 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 102.454 0 351.009 4 'crystal symmetry operation' 4_576 x,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 342.41 351.009 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 60 C CYS 139 1_555 C SG CYS 75 C CYS 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A SG CYS 21 A CYS 21 1_555 J CAB HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? covale ? covale2 A SG CYS 24 A CYS 24 1_555 J CAC HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? covale ? covale3 B SG CYS 35 B CYS 35 1_555 K CAB HEC . B HEC 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? metalc ? metalc1 A N TYR 1 A TYR 1 1_555 J FE HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc2 A NE2 HIS 25 A HIS 25 1_555 J FE HEC . A HEC 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc3 B NE2 HIS 86 B HIS 86 1_555 M FE HEC . B HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc4 B NE2 HIS 100 B HIS 100 1_555 L FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 B NE2 HIS 187 B HIS 187 1_555 M FE HEC . B HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc6 B NE2 HIS 202 B HIS 202 1_555 L FE HEC . B HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc7 K FE HEC . B HEC 903 1_555 V O HOH . B HOH 963 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc8 C SG CYS 55 C CYS 134 1_555 P FE2 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc9 C ND1 HIS 57 C HIS 136 1_555 P FE1 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc10 C SG CYS 73 C CYS 152 1_555 P FE2 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc11 C ND1 HIS 76 C HIS 155 1_555 P FE1 FES . C FES 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 524 n n C1 H11 LFA sing 525 n n C1 H12 LFA sing 526 n n C1 H13 LFA sing 527 n n C2 C3 LFA sing 528 n n C2 H21 LFA sing 529 n n C2 H22 LFA sing 530 n n C3 C4 LFA sing 531 n n C3 H31 LFA sing 532 n n C3 H32 LFA sing 533 n n C4 C5 LFA sing 534 n n C4 H41 LFA sing 535 n n C4 H42 LFA sing 536 n n C5 C6 LFA sing 537 n n C5 H51 LFA sing 538 n n C5 H52 LFA sing 539 n n C6 C7 LFA sing 540 n n C6 H61 LFA sing 541 n n C6 H62 LFA sing 542 n n C7 C8 LFA sing 543 n n C7 H71 LFA sing 544 n n C7 H72 LFA sing 545 n n C8 C9 LFA sing 546 n n C8 H81 LFA sing 547 n n C8 H82 LFA sing 548 n n C9 C10 LFA sing 549 n n C9 H91 LFA sing 550 n n C9 H92 LFA sing 551 n n C10 C11 LFA sing 552 n n C10 H101 LFA sing 553 n n C10 H102 LFA sing 554 n n C11 C12 LFA sing 555 n n C11 H111 LFA sing 556 n n C11 H112 LFA sing 557 n n C12 C13 LFA sing 558 n n C12 H121 LFA sing 559 n n C12 H122 LFA sing 560 n n C13 C14 LFA sing 561 n n C13 H131 LFA sing 562 n n C13 H132 LFA sing 563 n n C14 C15 LFA sing 564 n n C14 H141 LFA sing 565 n n C14 H142 LFA sing 566 n n C15 C16 LFA sing 567 n n C15 H151 LFA sing 568 n n C15 H152 LFA sing 569 n n C16 C17 LFA sing 570 n n C16 H161 LFA sing 571 n n C16 H162 LFA sing 572 n n C17 C18 LFA sing 573 n n C17 H171 LFA sing 574 n n C17 H172 LFA sing 575 n n C18 C19 LFA sing 576 n n C18 H181 LFA sing 577 n n C18 H182 LFA sing 578 n n C19 C20 LFA sing 579 n n C19 H191 LFA sing 580 n n C19 H192 LFA sing 581 n n C20 H201 LFA sing 582 n n C20 H202 LFA sing 583 n n C20 H203 LFA sing 584 n n # _atom_sites.entry_id 1Q90 _atom_sites.fract_transf_matrix[1][1] 0.00976 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 10 HEC A 1 900 900 HEC HEM . K 10 HEC B 1 903 903 HEC HEM . L 10 HEC B 1 901 901 HEC HEM . M 10 HEC B 1 902 902 HEC HEM . N 11 BCR B 1 904 904 BCR BCR . O 12 LFA B 1 960 960 LFA LFA . P 13 FES C 1 210 210 FES FES . Q 14 CLA D 1 910 910 CLA CLA . R 15 TDS D 1 920 920 TDS TDS . S 16 LMG D 1 953 953 LMG LMG . T 17 SQD R 1 950 950 SQD SQD . U 16 LMG L 1 951 951 LMG LMG . V 18 HOH B 1 961 961 HOH HOH . V 18 HOH B 2 963 963 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . O 12 69.353 147.71 122.87 1 59.24 ? C1 LFA 960 B 1 HETATM 2 C C2 LFA . . . O 12 69.183 147.189 124.259 1 59.24 ? C2 LFA 960 B 1 HETATM 3 C C3 LFA . . . O 12 67.961 147.789 124.887 1 59.24 ? C3 LFA 960 B 1 HETATM 4 C C4 LFA . . . O 12 67.431 147.026 125.98 1 59.24 ? C4 LFA 960 B 1 HETATM 5 C C5 LFA . . . O 12 66.017 147.344 126.377 1 59.24 ? C5 LFA 960 B 1 HETATM 6 C C6 LFA . . . O 12 65.764 146.83 127.725 1 59.24 ? C6 LFA 960 B 1 HETATM 7 C C7 LFA . . . O 12 64.886 147.556 128.712 1 59.24 ? C7 LFA 960 B 1 HETATM 8 C C8 LFA . . . O 12 65.725 148.055 129.896 1 59.24 ? C8 LFA 960 B 1 HETATM 9 C C9 LFA . . . O 12 64.974 148.337 131.183 1 59.24 ? C9 LFA 960 B 1 HETATM 10 C C10 LFA . . . O 12 64.253 149.672 131.335 1 59.24 ? C10 LFA 960 B 1 HETATM 11 C C11 LFA . . . O 12 65.104 150.949 131.298 1 59.24 ? C11 LFA 960 B 1 HETATM 12 C C12 LFA . . . O 12 64.855 151.88 130.102 1 59.24 ? C12 LFA 960 B 1 HETATM 13 C C13 LFA . . . O 12 64.529 153.339 130.404 1 59.24 ? C13 LFA 960 B 1 HETATM 14 C C14 LFA . . . O 12 63.069 153.658 130.653 1 59.24 ? C14 LFA 960 B 1 HETATM 15 C C15 LFA . . . O 12 62.726 154.176 132.037 1 59.24 ? C15 LFA 960 B 1 HETATM 16 C C16 LFA . . . O 12 61.582 155.176 132.1 1 59.24 ? C16 LFA 960 B 1 HETATM 17 C C17 LFA . . . O 12 61.031 155.501 133.485 1 59.24 ? C17 LFA 960 B 1 HETATM 18 C C18 LFA . . . O 12 59.68 154.886 133.822 1 59.24 ? C18 LFA 960 B 1 HETATM 19 C C19 LFA . . . O 12 59.654 153.948 135.027 1 59.24 ? C19 LFA 960 B 1 HETATM 20 C C20 LFA . . . O 12 58.907 152.675 134.86 1 59.24 ? C20 LFA 960 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #