data_1QBG
#
_model_server_result.job_id            HI4h2Im8IfJZ_JQQ3_MhsQ 
_model_server_result.datetime_utc      '2024-10-16 10:38:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1qbg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    1QBG 
#
_exptl.entry_id    1QBG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.1 
_cell.angle_beta          76.2 
_cell.angle_gamma         86.9 
_cell.entry_id            1QBG 
_cell.length_a            55.88 
_cell.length_b            57.49 
_cell.length_c            98.77 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1QBG 
_symmetry.cell_setting             triclinic 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
PISA,PQS dimeric 2 software_defined_assembly 5 
PISA,PQS dimeric 2 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D,H 4 1 
C,D,G,H 5 1 
A,B,E,F 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     1QBG 
_atom_sites.fract_transf_matrix[1][1]    0.017895 
_atom_sites.fract_transf_matrix[1][2]    -0.000969 
_atom_sites.fract_transf_matrix[1][3]    -0.004287 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01742 
_atom_sites.fract_transf_matrix[2][3]    -0.003871 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01068 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 501 1 FAD FAD . 
F 2 FAD B 1 601 1 FAD FAD . 
G 2 FAD C 1 801 1 FAD FAD . 
H 2 FAD D 1 701 1 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 -0.568 14.799 15.754 1 15.33 ? PA FAD 501 A 1 
HETATM 2 O O1A FAD . . . E 2 -1.393 15.188 16.929 1 24.59 ? O1A FAD 501 A 1 
HETATM 3 O O2A FAD . . . E 2 0.59 14.133 15.932 1 19.8 ? O2A FAD 501 A 1 
HETATM 4 O O5B FAD . . . E 2 -0.19 16.2 15.277 1 21.46 ? O5B FAD 501 A 1 
HETATM 5 C C5B FAD . . . E 2 -1.173 17.234 14.944 1 21.38 ? C5B FAD 501 A 1 
HETATM 6 C C4B FAD . . . E 2 -0.739 18.532 15.675 1 22.33 ? C4B FAD 501 A 1 
HETATM 7 O O4B FAD . . . E 2 -1.953 19.347 15.767 1 21.6 ? O4B FAD 501 A 1 
HETATM 8 C C3B FAD . . . E 2 -0.232 18.42 17.12 1 24.54 ? C3B FAD 501 A 1 
HETATM 9 O O3B FAD . . . E 2 0.775 19.332 17.496 1 24.28 ? O3B FAD 501 A 1 
HETATM 10 C C2B FAD . . . E 2 -1.53 18.444 17.919 1 24.89 ? C2B FAD 501 A 1 
HETATM 11 O O2B FAD . . . E 2 -1.281 18.809 19.243 1 28.21 ? O2B FAD 501 A 1 
HETATM 12 C C1B FAD . . . E 2 -2.263 19.549 17.203 1 24.95 ? C1B FAD 501 A 1 
HETATM 13 N N9A FAD . . . E 2 -3.729 19.485 17.195 1 24.34 ? N9A FAD 501 A 1 
HETATM 14 C C8A FAD . . . E 2 -4.514 18.401 17.531 1 24.3 ? C8A FAD 501 A 1 
HETATM 15 N N7A FAD . . . E 2 -5.814 18.65 17.423 1 25.58 ? N7A FAD 501 A 1 
HETATM 16 C C5A FAD . . . E 2 -5.891 19.952 16.998 1 27.08 ? C5A FAD 501 A 1 
HETATM 17 C C6A FAD . . . E 2 -7.048 20.818 16.689 1 28.78 ? C6A FAD 501 A 1 
HETATM 18 N N6A FAD . . . E 2 -8.299 20.437 16.787 1 29.76 ? N6A FAD 501 A 1 
HETATM 19 N N1A FAD . . . E 2 -6.722 22.098 16.28 1 27.35 ? N1A FAD 501 A 1 
HETATM 20 C C2A FAD . . . E 2 -5.427 22.535 16.164 1 27.14 ? C2A FAD 501 A 1 
HETATM 21 N N3A FAD . . . E 2 -4.315 21.811 16.426 1 25.81 ? N3A FAD 501 A 1 
HETATM 22 C C4A FAD . . . E 2 -4.596 20.52 16.838 1 25.14 ? C4A FAD 501 A 1 
HETATM 23 N N1 FAD . . . E 2 4.91 10.314 7.463 1 16.52 ? N1 FAD 501 A 1 
HETATM 24 C C2 FAD . . . E 2 5.204 10.404 6.16 1 15.35 ? C2 FAD 501 A 1 
HETATM 25 O O2 FAD . . . E 2 5.246 11.448 5.596 1 13.29 ? O2 FAD 501 A 1 
HETATM 26 N N3 FAD . . . E 2 5.481 9.249 5.365 1 12.5 ? N3 FAD 501 A 1 
HETATM 27 C C4 FAD . . . E 2 5.463 7.978 5.903 1 12.61 ? C4 FAD 501 A 1 
HETATM 28 O O4 FAD . . . E 2 5.704 7.027 5.191 1 9.94 ? O4 FAD 501 A 1 
HETATM 29 C C4X FAD . . . E 2 5.147 7.859 7.319 1 12.08 ? C4X FAD 501 A 1 
HETATM 30 N N5 FAD . . . E 2 5.12 6.638 7.895 1 16.36 ? N5 FAD 501 A 1 
HETATM 31 C C5X FAD . . . E 2 4.815 6.55 9.239 1 16.48 ? C5X FAD 501 A 1 
HETATM 32 C C6 FAD . . . E 2 4.789 5.247 9.815 1 15.34 ? C6 FAD 501 A 1 
HETATM 33 C C7 FAD . . . E 2 4.495 5.053 11.15 1 15.79 ? C7 FAD 501 A 1 
HETATM 34 C C7M FAD . . . E 2 4.479 3.646 11.712 1 12.81 ? C7M FAD 501 A 1 
HETATM 35 C C8 FAD . . . E 2 4.196 6.215 12.004 1 15.75 ? C8 FAD 501 A 1 
HETATM 36 C C8M FAD . . . E 2 3.863 6.056 13.474 1 16.38 ? C8M FAD 501 A 1 
HETATM 37 C C9 FAD . . . E 2 4.218 7.514 11.447 1 12.19 ? C9 FAD 501 A 1 
HETATM 38 C C9A FAD . . . E 2 4.523 7.694 10.076 1 14.28 ? C9A FAD 501 A 1 
HETATM 39 N N10 FAD . . . E 2 4.567 8.997 9.418 1 12.53 ? N10 FAD 501 A 1 
HETATM 40 C C10 FAD . . . E 2 4.871 9.091 8.083 1 13.75 ? C10 FAD 501 A 1 
HETATM 41 C C1' FAD . . . E 2 4.272 10.229 10.219 1 8.33 ? C1' FAD 501 A 1 
HETATM 42 C C2' FAD . . . E 2 2.73 10.474 10.35 1 6.51 ? C2' FAD 501 A 1 
HETATM 43 O O2' FAD . . . E 2 2.207 10.631 9.04 1 9.33 ? O2' FAD 501 A 1 
HETATM 44 C C3' FAD . . . E 2 2.493 11.733 11.188 1 9.31 ? C3' FAD 501 A 1 
HETATM 45 O O3' FAD . . . E 2 3.043 11.533 12.477 1 9.99 ? O3' FAD 501 A 1 
HETATM 46 C C4' FAD . . . E 2 0.986 12.011 11.349 1 9.02 ? C4' FAD 501 A 1 
HETATM 47 O O4' FAD . . . E 2 0.364 12.216 10.051 1 8.72 ? O4' FAD 501 A 1 
HETATM 48 C C5' FAD . . . E 2 0.809 13.26 12.215 1 11.34 ? C5' FAD 501 A 1 
HETATM 49 O O5' FAD . . . E 2 -0.757 13.537 12.395 1 14.28 ? O5' FAD 501 A 1 
HETATM 50 P P FAD . . . E 2 -1.489 13.095 13.659 1 15.22 ? P FAD 501 A 1 
HETATM 51 O O1P FAD . . . E 2 -2.911 12.78 13.107 1 15.56 ? O1P FAD 501 A 1 
HETATM 52 O O2P FAD . . . E 2 -0.889 12.046 14.342 1 18.8 ? O2P FAD 501 A 1 
HETATM 53 O O3P FAD . . . E 2 -1.507 14.204 14.618 1 16.65 ? O3P FAD 501 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#