data_1QBY # _model_server_result.job_id 2v5KAa_BEO32ml0nV7_xMQ _model_server_result.datetime_utc '2025-03-05 19:28:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qby # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":66}' # _entry.id 1QBY # _exptl.entry_id 1QBY _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 280.318 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QBY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QBY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale 'Benz[A]anthracene bound to N6 of Adenine 6 A' covale1 A N6 DA 6 A DA 6 1_555 C C4C BZA . A BZA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 11 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 11 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 11 B DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 10 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 10 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 10 B DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 3 A DG 3 1_555 B N3 DC 9 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 3 A DG 3 1_555 B O2 DC 9 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 3 A DG 3 1_555 B N4 DC 9 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 4 A DA 4 1_555 B N3 DT 8 B DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 4 A DA 4 1_555 B O4 DT 8 B DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DC 5 A DC 5 1_555 B N1 DG 7 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N4 DC 5 A DC 5 1_555 B O6 DG 7 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O2 DC 5 A DC 5 1_555 B N2 DG 7 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N1 DA 6 A DA 6 1_555 B N3 DT 6 B DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N6 DA 6 A DA 6 1_555 B O4 DT 6 B DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DA 7 A DA 7 1_555 B N3 DT 5 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N6 DA 7 A DA 7 1_555 B O4 DT 5 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DG 8 A DG 8 1_555 B N3 DC 4 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 DG 8 A DG 8 1_555 B O2 DC 4 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 DG 8 A DG 8 1_555 B N4 DC 4 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DA 9 A DA 9 1_555 B N3 DT 3 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N6 DA 9 A DA 9 1_555 B O4 DT 3 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DA 10 A DA 10 1_555 B N3 DT 2 B DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N6 DA 10 A DA 10 1_555 B O4 DT 2 B DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N1 DG 11 A DG 11 1_555 B N3 DC 1 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N2 DG 11 A DG 11 1_555 B O2 DC 1 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A O6 DG 11 A DG 11 1_555 B N4 DC 1 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C18 H16 O3' _chem_comp.formula_weight 280.318 _chem_comp.id BZA _chem_comp.mon_nstd_flag . _chem_comp.name 1R,2S,3R,4S-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QBY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id BZA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 66 _pdbx_nonpoly_scheme.auth_seq_num 6 _pdbx_nonpoly_scheme.pdb_mon_id BZA _pdbx_nonpoly_scheme.auth_mon_id BZA _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4C BZA . . . C 3 0.115 -2.084 2.615 1 0.18 ? C4C BZA 66 A 1 HETATM 2 C C9C BZA . . . C 3 -0.195 -3.301 3.504 1 0.18 ? C9C BZA 66 A 1 HETATM 3 O O3 BZA . . . C 3 -0.404 -2.872 4.851 1 0.18 ? O3 BZA 66 A 1 HETATM 4 C C8B BZA . . . C 3 0.911 -4.343 3.453 1 0.18 ? C8B BZA 66 A 1 HETATM 5 O O2 BZA . . . C 3 0.537 -5.501 4.204 1 0.18 ? O2 BZA 66 A 1 HETATM 6 C C3B BZA . . . C 3 2.191 -3.749 4.004 1 0.17 ? C3B BZA 66 A 1 HETATM 7 O O1 BZA . . . C 3 3.232 -4.729 4.033 1 0.17 ? O1 BZA 66 A 1 HETATM 8 C C3A BZA . . . C 3 2.602 -2.602 3.118 1 0.18 ? C3A BZA 66 A 1 HETATM 9 C C2A BZA . . . C 3 3.98 -2.315 2.944 1 0.18 ? C2A BZA 66 A 1 HETATM 10 C C4A BZA . . . C 3 1.617 -1.811 2.454 1 0.18 ? C4A BZA 66 A 1 HETATM 11 C C1A BZA . . . C 3 4.388 -1.25 2.113 1 0.19 ? C1A BZA 66 A 1 HETATM 12 C C5A BZA . . . C 3 1.079 0.06 0.941 1 0.2 ? C5A BZA 66 A 1 HETATM 13 C C4B BZA . . . C 3 2.038 -0.737 1.617 1 0.19 ? C4B BZA 66 A 1 HETATM 14 C C6A BZA . . . C 3 0.535 1.901 -0.577 1 0.22 ? C6A BZA 66 A 1 HETATM 15 C C7A BZA . . . C 3 0.951 2.962 -1.411 1 0.24 ? C7A BZA 66 A 1 HETATM 16 C C8A BZA . . . C 3 2.327 3.239 -1.568 1 0.24 ? C8A BZA 66 A 1 HETATM 17 C C5B BZA . . . C 3 1.496 1.115 0.101 1 0.21 ? C5B BZA 66 A 1 HETATM 18 C C9B BZA . . . C 3 2.877 1.388 -0.065 1 0.21 ? C9B BZA 66 A 1 HETATM 19 C C11 BZA . . . C 3 3.423 -0.461 1.449 1 0.19 ? C11 BZA 66 A 1 HETATM 20 C C9A BZA . . . C 3 3.289 2.452 -0.9 1 0.23 ? C9A BZA 66 A 1 HETATM 21 C C10 BZA . . . C 3 3.839 0.602 0.611 1 0.2 ? C10 BZA 66 A 1 HETATM 22 H H4C1 BZA . . . C 3 -0.335 -1.209 3.076 1 0.17 ? H4C1 BZA 66 A 1 HETATM 23 H H9C BZA . . . C 3 -1.115 -3.759 3.148 1 0.2 ? H9C BZA 66 A 1 HETATM 24 H H3 BZA . . . C 3 -1.088 -2.2 4.828 1 0.19 ? H3 BZA 66 A 1 HETATM 25 H H8B BZA . . . C 3 1.074 -4.635 2.415 1 0.18 ? H8B BZA 66 A 1 HETATM 26 H HO2 BZA . . . C 3 -0.258 -5.279 4.694 1 0.67 ? HO2 BZA 66 A 1 HETATM 27 H H3B BZA . . . C 3 2.013 -3.38 5.014 1 0.18 ? H3B BZA 66 A 1 HETATM 28 H H1 BZA . . . C 3 2.858 -5.532 4.403 1 0.23 ? H1 BZA 66 A 1 HETATM 29 H H2A BZA . . . C 3 4.722 -2.916 3.445 1 0.19 ? H2A BZA 66 A 1 HETATM 30 H H1A BZA . . . C 3 5.439 -1.036 1.989 1 0.2 ? H1A BZA 66 A 1 HETATM 31 H H5A BZA . . . C 3 0.027 -0.137 1.071 1 0.2 ? H5A BZA 66 A 1 HETATM 32 H H6A BZA . . . C 3 -0.513 1.68 -0.469 1 0.22 ? H6A BZA 66 A 1 HETATM 33 H H7A BZA . . . C 3 0.218 3.565 -1.924 1 0.25 ? H7A BZA 66 A 1 HETATM 34 H H8A BZA . . . C 3 2.642 4.054 -2.195 1 0.25 ? H8A BZA 66 A 1 HETATM 35 H H9A BZA . . . C 3 4.337 2.656 -1.038 1 0.23 ? H9A BZA 66 A 1 HETATM 36 H H10 BZA . . . C 3 4.891 0.81 0.485 1 0.21 ? H10 BZA 66 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #