data_1QBZ # _model_server_result.job_id KQjaV6kpyM-UMnAqmCkjbQ _model_server_result.datetime_utc '2025-03-05 18:14:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qbz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":8001}' # _entry.id 1QBZ # _exptl.entry_id 1QBZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.83 _cell.angle_gamma 90 _cell.entry_id 1QBZ _cell.length_a 91.124 _cell.length_b 47.206 _cell.length_c 77.465 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QBZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 76.568666 0 76.085271 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 15 A GLN 41 1_555 D HG HG . A HG 8001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.523 ? metalc ? metalc2 A SD MET 115 A MET 141 1_555 D HG HG . A HG 8001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc3 D HG HG . A HG 8001 1_555 K O HOH . A HOH 8063 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc4 F HG HG . B HG 8002 1_555 L O HOH . B HOH 8046 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc5 F HG HG . B HG 8002 1_555 L O HOH . B HOH 8046 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc6 F HG HG . B HG 8002 1_555 L O HOH . B HOH 8052 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 F HG HG . B HG 8002 1_555 L O HOH . B HOH 8052 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QBZ _atom_sites.fract_transf_matrix[1][1] 0.010974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0021 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HG A 1 8001 8001 HG HG . E 3 MRD A 1 7001 7001 MRD MPD . F 2 HG B 1 8002 8002 HG HG . G 4 CL B 1 8004 8004 CL CL . H 4 CL C 1 8003 8003 CL CL . I 4 CL C 1 8005 8005 CL CL . J 3 MRD C 1 7002 7002 MRD MPD . K 5 HOH A 1 8002 1 HOH HOH . K 5 HOH A 2 8003 2 HOH HOH . K 5 HOH A 3 8004 10 HOH HOH . K 5 HOH A 4 8005 11 HOH HOH . K 5 HOH A 5 8006 14 HOH HOH . K 5 HOH A 6 8007 19 HOH HOH . K 5 HOH A 7 8008 20 HOH HOH . K 5 HOH A 8 8009 39 HOH HOH . K 5 HOH A 9 8010 42 HOH HOH . K 5 HOH A 10 8011 43 HOH HOH . K 5 HOH A 11 8012 51 HOH HOH . K 5 HOH A 12 8013 52 HOH HOH . K 5 HOH A 13 8014 55 HOH HOH . K 5 HOH A 14 8015 63 HOH HOH . K 5 HOH A 15 8016 64 HOH HOH . K 5 HOH A 16 8017 70 HOH HOH . K 5 HOH A 17 8018 71 HOH HOH . K 5 HOH A 18 8019 77 HOH HOH . K 5 HOH A 19 8020 78 HOH HOH . K 5 HOH A 20 8021 85 HOH HOH . K 5 HOH A 21 8022 88 HOH HOH . K 5 HOH A 22 8023 90 HOH HOH . K 5 HOH A 23 8024 96 HOH HOH . K 5 HOH A 24 8025 102 HOH HOH . K 5 HOH A 25 8026 106 HOH HOH . K 5 HOH A 26 8027 107 HOH HOH . K 5 HOH A 27 8028 110 HOH HOH . K 5 HOH A 28 8029 112 HOH HOH . K 5 HOH A 29 8030 115 HOH HOH . K 5 HOH A 30 8031 119 HOH HOH . K 5 HOH A 31 8032 126 HOH HOH . K 5 HOH A 32 8033 131 HOH HOH . K 5 HOH A 33 8034 134 HOH HOH . K 5 HOH A 34 8035 137 HOH HOH . K 5 HOH A 35 8036 138 HOH HOH . K 5 HOH A 36 8037 148 HOH HOH . K 5 HOH A 37 8038 155 HOH HOH . K 5 HOH A 38 8039 163 HOH HOH . K 5 HOH A 39 8040 177 HOH HOH . K 5 HOH A 40 8041 179 HOH HOH . K 5 HOH A 41 8042 181 HOH HOH . K 5 HOH A 42 8043 188 HOH HOH . K 5 HOH A 43 8044 189 HOH HOH . K 5 HOH A 44 8045 191 HOH HOH . K 5 HOH A 45 8046 193 HOH HOH . K 5 HOH A 46 8047 194 HOH HOH . K 5 HOH A 47 8048 201 HOH HOH . K 5 HOH A 48 8049 211 HOH HOH . K 5 HOH A 49 8050 213 HOH HOH . K 5 HOH A 50 8051 214 HOH HOH . K 5 HOH A 51 8052 219 HOH HOH . K 5 HOH A 52 8053 221 HOH HOH . K 5 HOH A 53 8054 222 HOH HOH . K 5 HOH A 54 8055 229 HOH HOH . K 5 HOH A 55 8056 230 HOH HOH . K 5 HOH A 56 8057 231 HOH HOH . K 5 HOH A 57 8058 235 HOH HOH . K 5 HOH A 58 8059 238 HOH HOH . K 5 HOH A 59 8060 239 HOH HOH . K 5 HOH A 60 8061 240 HOH HOH . K 5 HOH A 61 8062 241 HOH HOH . K 5 HOH A 62 8063 243 HOH HOH . K 5 HOH A 63 8064 245 HOH HOH . K 5 HOH A 64 8065 248 HOH HOH . K 5 HOH A 65 8066 249 HOH HOH . K 5 HOH A 66 8067 261 HOH HOH . L 5 HOH B 1 8005 4 HOH HOH . L 5 HOH B 2 8006 5 HOH HOH . L 5 HOH B 3 8007 6 HOH HOH . L 5 HOH B 4 8008 9 HOH HOH . L 5 HOH B 5 8009 12 HOH HOH . L 5 HOH B 6 8010 15 HOH HOH . L 5 HOH B 7 8011 17 HOH HOH . L 5 HOH B 8 8012 18 HOH HOH . L 5 HOH B 9 8013 26 HOH HOH . L 5 HOH B 10 8014 27 HOH HOH . L 5 HOH B 11 8015 28 HOH HOH . L 5 HOH B 12 8016 29 HOH HOH . L 5 HOH B 13 8017 32 HOH HOH . L 5 HOH B 14 8018 33 HOH HOH . L 5 HOH B 15 8019 35 HOH HOH . L 5 HOH B 16 8020 38 HOH HOH . L 5 HOH B 17 8021 40 HOH HOH . L 5 HOH B 18 8022 41 HOH HOH . L 5 HOH B 19 8023 49 HOH HOH . L 5 HOH B 20 8024 50 HOH HOH . L 5 HOH B 21 8025 53 HOH HOH . L 5 HOH B 22 8026 54 HOH HOH . L 5 HOH B 23 8027 57 HOH HOH . L 5 HOH B 24 8028 58 HOH HOH . L 5 HOH B 25 8029 60 HOH HOH . L 5 HOH B 26 8030 62 HOH HOH . L 5 HOH B 27 8031 66 HOH HOH . L 5 HOH B 28 8032 67 HOH HOH . L 5 HOH B 29 8033 69 HOH HOH . L 5 HOH B 30 8034 73 HOH HOH . L 5 HOH B 31 8035 74 HOH HOH . L 5 HOH B 32 8036 75 HOH HOH . L 5 HOH B 33 8037 76 HOH HOH . L 5 HOH B 34 8038 79 HOH HOH . L 5 HOH B 35 8039 83 HOH HOH . L 5 HOH B 36 8040 84 HOH HOH . L 5 HOH B 37 8041 87 HOH HOH . L 5 HOH B 38 8042 91 HOH HOH . L 5 HOH B 39 8043 92 HOH HOH . L 5 HOH B 40 8044 101 HOH HOH . L 5 HOH B 41 8045 105 HOH HOH . L 5 HOH B 42 8046 116 HOH HOH . L 5 HOH B 43 8047 118 HOH HOH . L 5 HOH B 44 8048 121 HOH HOH . L 5 HOH B 45 8049 122 HOH HOH . L 5 HOH B 46 8050 123 HOH HOH . L 5 HOH B 47 8051 124 HOH HOH . L 5 HOH B 48 8052 128 HOH HOH . L 5 HOH B 49 8053 130 HOH HOH . L 5 HOH B 50 8054 132 HOH HOH . L 5 HOH B 51 8055 133 HOH HOH . L 5 HOH B 52 8056 136 HOH HOH . L 5 HOH B 53 8057 139 HOH HOH . L 5 HOH B 54 8058 140 HOH HOH . L 5 HOH B 55 8059 143 HOH HOH . L 5 HOH B 56 8060 144 HOH HOH . L 5 HOH B 57 8061 149 HOH HOH . L 5 HOH B 58 8062 153 HOH HOH . L 5 HOH B 59 8063 154 HOH HOH . L 5 HOH B 60 8064 157 HOH HOH . L 5 HOH B 61 8065 159 HOH HOH . L 5 HOH B 62 8066 160 HOH HOH . L 5 HOH B 63 8067 161 HOH HOH . L 5 HOH B 64 8068 162 HOH HOH . L 5 HOH B 65 8069 164 HOH HOH . L 5 HOH B 66 8070 166 HOH HOH . L 5 HOH B 67 8071 167 HOH HOH . L 5 HOH B 68 8072 168 HOH HOH . L 5 HOH B 69 8073 169 HOH HOH . L 5 HOH B 70 8074 171 HOH HOH . L 5 HOH B 71 8075 172 HOH HOH . L 5 HOH B 72 8076 173 HOH HOH . L 5 HOH B 73 8077 175 HOH HOH . L 5 HOH B 74 8078 178 HOH HOH . L 5 HOH B 75 8079 183 HOH HOH . L 5 HOH B 76 8080 184 HOH HOH . L 5 HOH B 77 8081 185 HOH HOH . L 5 HOH B 78 8082 187 HOH HOH . L 5 HOH B 79 8083 190 HOH HOH . L 5 HOH B 80 8084 192 HOH HOH . L 5 HOH B 81 8085 198 HOH HOH . L 5 HOH B 82 8086 199 HOH HOH . L 5 HOH B 83 8087 200 HOH HOH . L 5 HOH B 84 8088 205 HOH HOH . L 5 HOH B 85 8089 206 HOH HOH . L 5 HOH B 86 8090 208 HOH HOH . L 5 HOH B 87 8091 209 HOH HOH . L 5 HOH B 88 8092 216 HOH HOH . L 5 HOH B 89 8093 218 HOH HOH . L 5 HOH B 90 8094 220 HOH HOH . L 5 HOH B 91 8095 223 HOH HOH . L 5 HOH B 92 8096 224 HOH HOH . L 5 HOH B 93 8097 228 HOH HOH . L 5 HOH B 94 8098 232 HOH HOH . L 5 HOH B 95 8099 234 HOH HOH . L 5 HOH B 96 8100 244 HOH HOH . L 5 HOH B 97 8101 246 HOH HOH . L 5 HOH B 98 8102 247 HOH HOH . L 5 HOH B 99 8103 253 HOH HOH . L 5 HOH B 100 8104 254 HOH HOH . L 5 HOH B 101 8105 255 HOH HOH . L 5 HOH B 102 8106 259 HOH HOH . L 5 HOH B 103 8107 260 HOH HOH . L 5 HOH B 104 8108 262 HOH HOH . L 5 HOH B 105 8109 263 HOH HOH . M 5 HOH C 1 8006 3 HOH HOH . M 5 HOH C 2 8007 7 HOH HOH . M 5 HOH C 3 8008 8 HOH HOH . M 5 HOH C 4 8009 13 HOH HOH . M 5 HOH C 5 8010 16 HOH HOH . M 5 HOH C 6 8011 21 HOH HOH . M 5 HOH C 7 8012 22 HOH HOH . M 5 HOH C 8 8013 23 HOH HOH . M 5 HOH C 9 8014 24 HOH HOH . M 5 HOH C 10 8015 25 HOH HOH . M 5 HOH C 11 8016 30 HOH HOH . M 5 HOH C 12 8017 31 HOH HOH . M 5 HOH C 13 8018 34 HOH HOH . M 5 HOH C 14 8019 36 HOH HOH . M 5 HOH C 15 8020 37 HOH HOH . M 5 HOH C 16 8021 44 HOH HOH . M 5 HOH C 17 8022 45 HOH HOH . M 5 HOH C 18 8023 46 HOH HOH . M 5 HOH C 19 8024 47 HOH HOH . M 5 HOH C 20 8025 48 HOH HOH . M 5 HOH C 21 8026 56 HOH HOH . M 5 HOH C 22 8027 59 HOH HOH . M 5 HOH C 23 8028 61 HOH HOH . M 5 HOH C 24 8029 65 HOH HOH . M 5 HOH C 25 8030 68 HOH HOH . M 5 HOH C 26 8031 72 HOH HOH . M 5 HOH C 27 8032 80 HOH HOH . M 5 HOH C 28 8033 81 HOH HOH . M 5 HOH C 29 8034 82 HOH HOH . M 5 HOH C 30 8035 86 HOH HOH . M 5 HOH C 31 8036 89 HOH HOH . M 5 HOH C 32 8037 93 HOH HOH . M 5 HOH C 33 8038 94 HOH HOH . M 5 HOH C 34 8039 95 HOH HOH . M 5 HOH C 35 8040 97 HOH HOH . M 5 HOH C 36 8041 98 HOH HOH . M 5 HOH C 37 8042 99 HOH HOH . M 5 HOH C 38 8043 100 HOH HOH . M 5 HOH C 39 8044 103 HOH HOH . M 5 HOH C 40 8045 104 HOH HOH . M 5 HOH C 41 8046 108 HOH HOH . M 5 HOH C 42 8047 109 HOH HOH . M 5 HOH C 43 8048 111 HOH HOH . M 5 HOH C 44 8049 113 HOH HOH . M 5 HOH C 45 8050 114 HOH HOH . M 5 HOH C 46 8051 117 HOH HOH . M 5 HOH C 47 8052 120 HOH HOH . M 5 HOH C 48 8053 125 HOH HOH . M 5 HOH C 49 8054 127 HOH HOH . M 5 HOH C 50 8055 129 HOH HOH . M 5 HOH C 51 8056 135 HOH HOH . M 5 HOH C 52 8057 141 HOH HOH . M 5 HOH C 53 8058 142 HOH HOH . M 5 HOH C 54 8059 145 HOH HOH . M 5 HOH C 55 8060 146 HOH HOH . M 5 HOH C 56 8061 147 HOH HOH . M 5 HOH C 57 8062 150 HOH HOH . M 5 HOH C 58 8063 151 HOH HOH . M 5 HOH C 59 8064 152 HOH HOH . M 5 HOH C 60 8065 156 HOH HOH . M 5 HOH C 61 8066 158 HOH HOH . M 5 HOH C 62 8067 165 HOH HOH . M 5 HOH C 63 8068 170 HOH HOH . M 5 HOH C 64 8069 174 HOH HOH . M 5 HOH C 65 8070 176 HOH HOH . M 5 HOH C 66 8071 180 HOH HOH . M 5 HOH C 67 8072 182 HOH HOH . M 5 HOH C 68 8073 186 HOH HOH . M 5 HOH C 69 8074 195 HOH HOH . M 5 HOH C 70 8075 196 HOH HOH . M 5 HOH C 71 8076 197 HOH HOH . M 5 HOH C 72 8077 202 HOH HOH . M 5 HOH C 73 8078 203 HOH HOH . M 5 HOH C 74 8079 204 HOH HOH . M 5 HOH C 75 8080 207 HOH HOH . M 5 HOH C 76 8081 210 HOH HOH . M 5 HOH C 77 8082 212 HOH HOH . M 5 HOH C 78 8083 215 HOH HOH . M 5 HOH C 79 8084 217 HOH HOH . M 5 HOH C 80 8085 225 HOH HOH . M 5 HOH C 81 8086 227 HOH HOH . M 5 HOH C 82 8087 233 HOH HOH . M 5 HOH C 83 8088 236 HOH HOH . M 5 HOH C 84 8089 242 HOH HOH . M 5 HOH C 85 8090 250 HOH HOH . M 5 HOH C 86 8091 251 HOH HOH . M 5 HOH C 87 8092 252 HOH HOH . M 5 HOH C 88 8093 256 HOH HOH . M 5 HOH C 89 8094 257 HOH HOH . M 5 HOH C 90 8095 258 HOH HOH . M 5 HOH C 91 8096 264 HOH HOH . M 5 HOH C 92 8097 265 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.257 _atom_site.Cartn_y 1.325 _atom_site.Cartn_z 40.102 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 48.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 8001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #