data_1QCR # _model_server_result.job_id qWXMpoS3F4t8bf6bMlGvrw _model_server_result.datetime_utc '2024-11-05 14:37:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":609}' # _entry.id 1QCR # _exptl.entry_id 1QCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QCR _cell.length_a 153.5 _cell.length_b 153.5 _cell.length_c 597.7 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details undecameric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 1QCR _atom_sites.fract_transf_matrix[1][1] 0.006515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001673 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id L _pdbx_nonpoly_scheme.entity_id 12 _pdbx_nonpoly_scheme.mon_id HEM _pdbx_nonpoly_scheme.pdb_strand_id C _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 609 _pdbx_nonpoly_scheme.auth_seq_num 609 _pdbx_nonpoly_scheme.pdb_mon_id HEM _pdbx_nonpoly_scheme.auth_mon_id HEM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . L 12 65.717 63.845 143.757 1 58.54 ? CHA HEM 609 C 1 HETATM 2 C CHB HEM . . . L 12 66.165 66.921 147.563 1 58.51 ? CHB HEM 609 C 1 HETATM 3 C CHC HEM . . . L 12 68.187 63.201 150.002 1 58.69 ? CHC HEM 609 C 1 HETATM 4 C CHD HEM . . . L 12 67.978 60.3 146.076 1 58.64 ? CHD HEM 609 C 1 HETATM 5 C C1A HEM . . . L 12 65.755 64.945 144.589 1 58.46 ? C1A HEM 609 C 1 HETATM 6 C C2A HEM . . . L 12 64.993 66.077 144.231 1 58.5 ? C2A HEM 609 C 1 HETATM 7 C C3A HEM . . . L 12 65.08 66.941 145.215 1 58.46 ? C3A HEM 609 C 1 HETATM 8 C C4A HEM . . . L 12 65.982 66.329 146.222 1 58.5 ? C4A HEM 609 C 1 HETATM 9 C CMA HEM . . . L 12 64.248 68.234 145.28 1 58.46 ? CMA HEM 609 C 1 HETATM 10 C CAA HEM . . . L 12 64.246 66.29 142.938 1 58.49 ? CAA HEM 609 C 1 HETATM 11 C CBA HEM . . . L 12 63.211 65.236 142.543 1 58.6 ? CBA HEM 609 C 1 HETATM 12 C CGA HEM . . . L 12 62.108 65.147 143.57 1 58.68 ? CGA HEM 609 C 1 HETATM 13 O O1A HEM . . . L 12 62.388 64.787 144.739 1 58.75 ? O1A HEM 609 C 1 HETATM 14 O O2A HEM . . . L 12 60.954 65.458 143.213 1 58.69 ? O2A HEM 609 C 1 HETATM 15 C C1B HEM . . . L 12 66.75 66.18 148.631 1 58.4 ? C1B HEM 609 C 1 HETATM 16 C C2B HEM . . . L 12 66.956 66.557 150.049 1 58.38 ? C2B HEM 609 C 1 HETATM 17 C C3B HEM . . . L 12 67.725 65.556 150.569 1 58.38 ? C3B HEM 609 C 1 HETATM 18 C C4B HEM . . . L 12 67.771 64.486 149.629 1 58.48 ? C4B HEM 609 C 1 HETATM 19 C CMB HEM . . . L 12 66.274 67.584 150.954 1 58.29 ? CMB HEM 609 C 1 HETATM 20 C CAB HEM . . . L 12 68.512 65.493 151.721 1 58.26 ? CAB HEM 609 C 1 HETATM 21 C CBB HEM . . . L 12 69.303 66.621 152.361 1 58.19 ? CBB HEM 609 C 1 HETATM 22 C C1C HEM . . . L 12 68.14 62.027 149.163 1 58.58 ? C1C HEM 609 C 1 HETATM 23 C C2C HEM . . . L 12 68.47 60.58 149.659 1 58.6 ? C2C HEM 609 C 1 HETATM 24 C C3C HEM . . . L 12 68.44 59.809 148.588 1 58.57 ? C3C HEM 609 C 1 HETATM 25 C C4C HEM . . . L 12 68.088 60.722 147.37 1 58.6 ? C4C HEM 609 C 1 HETATM 26 C CMC HEM . . . L 12 68.872 60.007 151.051 1 58.54 ? CMC HEM 609 C 1 HETATM 27 C CAC HEM . . . L 12 68.538 58.437 148.756 1 58.6 ? CAC HEM 609 C 1 HETATM 28 C CBC HEM . . . L 12 69.828 57.657 148.89 1 58.59 ? CBC HEM 609 C 1 HETATM 29 C C1D HEM . . . L 12 67.437 61.108 145.091 1 58.49 ? C1D HEM 609 C 1 HETATM 30 C C2D HEM . . . L 12 67.348 60.634 143.683 1 58.55 ? C2D HEM 609 C 1 HETATM 31 C C3D HEM . . . L 12 66.553 61.511 143.029 1 58.53 ? C3D HEM 609 C 1 HETATM 32 C C4D HEM . . . L 12 66.248 62.611 144.041 1 58.56 ? C4D HEM 609 C 1 HETATM 33 C CMD HEM . . . L 12 68.215 59.476 143.087 1 58.59 ? CMD HEM 609 C 1 HETATM 34 C CAD HEM . . . L 12 66.024 61.241 141.625 1 58.56 ? CAD HEM 609 C 1 HETATM 35 C CBD HEM . . . L 12 64.65 61.847 141.663 1 58.65 ? CBD HEM 609 C 1 HETATM 36 C CGD HEM . . . L 12 63.737 61.5 140.497 1 58.73 ? CGD HEM 609 C 1 HETATM 37 O O1D HEM . . . L 12 64.018 61.954 139.373 1 58.69 ? O1D HEM 609 C 1 HETATM 38 O O2D HEM . . . L 12 62.722 60.788 140.717 1 58.77 ? O2D HEM 609 C 1 HETATM 39 N NA HEM . . . L 12 66.351 65.039 145.799 1 58.48 ? NA HEM 609 C 1 HETATM 40 N NB HEM . . . L 12 67.233 64.824 148.404 1 58.51 ? NB HEM 609 C 1 HETATM 41 N NC HEM . . . L 12 67.825 62.097 147.751 1 58.63 ? NC HEM 609 C 1 HETATM 42 N ND HEM . . . L 12 66.873 62.417 145.299 1 58.52 ? ND HEM 609 C 1 HETATM 43 FE FE HEM . . . L 12 67.208 63.704 146.735 1 58.75 ? FE HEM 609 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 43 #