data_1QCW # _model_server_result.job_id zrHr8ld3INoCHpYpSJ_diQ _model_server_result.datetime_utc '2024-11-28 06:54:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":571}' # _entry.id 1QCW # _exptl.entry_id 1QCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 536.407 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-SULFO-FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1QCW _cell.length_a 162.569 _cell.length_b 162.569 _cell.length_c 112.011 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QCW _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H21 N4 O12 P S' _chem_comp.formula_weight 536.407 _chem_comp.id FNS _chem_comp.mon_nstd_flag . _chem_comp.name 'N-SULFO-FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FNS sing 83 n n N1 C10 FNS doub 84 n n C2 O2 FNS doub 85 n n C2 N3 FNS sing 86 n n N3 C4 FNS sing 87 n n N3 HN3 FNS sing 88 n n C4 O4 FNS doub 89 n n C4 C4A FNS sing 90 n n C4A N5 FNS doub 91 n n C4A C10 FNS sing 92 n n N5 S FNS sing 93 n n N5 C5A FNS sing 94 n n S O1S FNS sing 95 n n S O2S FNS doub 96 n n S O3S FNS doub 97 n n C5A C6 FNS doub 98 n y C5A C9A FNS sing 99 n y C6 C7 FNS sing 100 n y C6 H6 FNS sing 101 n n C7 C7M FNS sing 102 n n C7 C8 FNS doub 103 n y C7M HM71 FNS sing 104 n n C7M HM72 FNS sing 105 n n C7M HM73 FNS sing 106 n n C8 C8M FNS sing 107 n n C8 C9 FNS sing 108 n y C8M HM81 FNS sing 109 n n C8M HM82 FNS sing 110 n n C8M HM83 FNS sing 111 n n C9 C9A FNS doub 112 n y C9 H9 FNS sing 113 n n C9A N10 FNS sing 114 n n N10 C10 FNS sing 115 n n N10 C1' FNS sing 116 n n C1' C2' FNS sing 117 n n C1' "H1'1" FNS sing 118 n n C1' "H1'2" FNS sing 119 n n C2' O2' FNS sing 120 n n C2' C3' FNS sing 121 n n C2' H2' FNS sing 122 n n O2' HO2' FNS sing 123 n n C3' O3' FNS sing 124 n n C3' C4' FNS sing 125 n n C3' H3' FNS sing 126 n n O3' HO3' FNS sing 127 n n C4' O4' FNS sing 128 n n C4' C5' FNS sing 129 n n C4' H4' FNS sing 130 n n O4' HO4' FNS sing 131 n n C5' O5' FNS sing 132 n n C5' "H5'1" FNS sing 133 n n C5' "H5'2" FNS sing 134 n n O5' P FNS sing 135 n n P O1P FNS doub 136 n n P O2P FNS sing 137 n n P O3P FNS sing 138 n n O2P HOP2 FNS sing 139 n n O3P HOP3 FNS sing 140 n n # _atom_sites.entry_id 1QCW _atom_sites.fract_transf_matrix[1][1] 0.006151 _atom_sites.fract_transf_matrix[1][2] 0.003551 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008928 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FNS A 1 570 570 FNS FNS . D 2 FNS B 1 571 570 FNS FNS . E 3 HOH A 1 2 2 HOH HOH . E 3 HOH A 2 9 9 HOH HOH . E 3 HOH A 3 10 10 HOH HOH . E 3 HOH A 4 11 11 HOH HOH . E 3 HOH A 5 13 13 HOH HOH . E 3 HOH A 6 14 14 HOH HOH . E 3 HOH A 7 15 15 HOH HOH . E 3 HOH A 8 16 16 HOH HOH . E 3 HOH A 9 20 20 HOH HOH . E 3 HOH A 10 21 21 HOH HOH . E 3 HOH A 11 22 22 HOH HOH . E 3 HOH A 12 23 23 HOH HOH . E 3 HOH A 13 24 24 HOH HOH . E 3 HOH A 14 26 26 HOH HOH . E 3 HOH A 15 27 27 HOH HOH . E 3 HOH A 16 28 28 HOH HOH . E 3 HOH A 17 31 31 HOH HOH . E 3 HOH A 18 32 32 HOH HOH . E 3 HOH A 19 34 34 HOH HOH . E 3 HOH A 20 35 35 HOH HOH . E 3 HOH A 21 36 36 HOH HOH . E 3 HOH A 22 38 38 HOH HOH . E 3 HOH A 23 39 39 HOH HOH . E 3 HOH A 24 42 42 HOH HOH . E 3 HOH A 25 43 43 HOH HOH . E 3 HOH A 26 44 44 HOH HOH . E 3 HOH A 27 45 45 HOH HOH . E 3 HOH A 28 46 46 HOH HOH . E 3 HOH A 29 48 48 HOH HOH . E 3 HOH A 30 49 49 HOH HOH . E 3 HOH A 31 50 50 HOH HOH . E 3 HOH A 32 51 51 HOH HOH . E 3 HOH A 33 52 52 HOH HOH . E 3 HOH A 34 53 53 HOH HOH . E 3 HOH A 35 54 54 HOH HOH . E 3 HOH A 36 56 56 HOH HOH . E 3 HOH A 37 58 58 HOH HOH . E 3 HOH A 38 59 59 HOH HOH . E 3 HOH A 39 62 62 HOH HOH . E 3 HOH A 40 63 63 HOH HOH . E 3 HOH A 41 64 64 HOH HOH . E 3 HOH A 42 65 65 HOH HOH . E 3 HOH A 43 66 66 HOH HOH . E 3 HOH A 44 68 68 HOH HOH . E 3 HOH A 45 69 69 HOH HOH . E 3 HOH A 46 70 70 HOH HOH . E 3 HOH A 47 71 71 HOH HOH . E 3 HOH A 48 72 72 HOH HOH . E 3 HOH A 49 74 74 HOH HOH . E 3 HOH A 50 75 75 HOH HOH . F 3 HOH B 1 1 1 HOH HOH . F 3 HOH B 2 3 3 HOH HOH . F 3 HOH B 3 4 4 HOH HOH . F 3 HOH B 4 5 5 HOH HOH . F 3 HOH B 5 6 6 HOH HOH . F 3 HOH B 6 7 7 HOH HOH . F 3 HOH B 7 8 8 HOH HOH . F 3 HOH B 8 12 12 HOH HOH . F 3 HOH B 9 17 17 HOH HOH . F 3 HOH B 10 18 18 HOH HOH . F 3 HOH B 11 19 19 HOH HOH . F 3 HOH B 12 25 25 HOH HOH . F 3 HOH B 13 29 29 HOH HOH . F 3 HOH B 14 30 30 HOH HOH . F 3 HOH B 15 33 33 HOH HOH . F 3 HOH B 16 37 37 HOH HOH . F 3 HOH B 17 40 40 HOH HOH . F 3 HOH B 18 41 41 HOH HOH . F 3 HOH B 19 47 47 HOH HOH . F 3 HOH B 20 55 55 HOH HOH . F 3 HOH B 21 57 57 HOH HOH . F 3 HOH B 22 60 60 HOH HOH . F 3 HOH B 23 61 61 HOH HOH . F 3 HOH B 24 67 67 HOH HOH . F 3 HOH B 25 73 73 HOH HOH . F 3 HOH B 26 76 76 HOH HOH . F 3 HOH B 27 77 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FNS . . . D 2 42.827 72.007 -31.403 1 17.78 ? N1 FNS 571 B 1 HETATM 2 C C2 FNS . . . D 2 43.433 72.127 -32.625 1 19.6 ? C2 FNS 571 B 1 HETATM 3 O O2 FNS . . . D 2 44.077 73.127 -32.899 1 15.52 ? O2 FNS 571 B 1 HETATM 4 N N3 FNS . . . D 2 43.253 71.015 -33.499 1 22.96 ? N3 FNS 571 B 1 HETATM 5 C C4 FNS . . . D 2 42.629 69.794 -33.197 1 23.43 ? C4 FNS 571 B 1 HETATM 6 O O4 FNS . . . D 2 42.429 68.954 -34.084 1 19.49 ? O4 FNS 571 B 1 HETATM 7 C C4A FNS . . . D 2 42.349 69.721 -31.784 1 25.17 ? C4A FNS 571 B 1 HETATM 8 N N5 FNS . . . D 2 42.215 68.539 -31.159 1 28.29 ? N5 FNS 571 B 1 HETATM 9 S S FNS . . . D 2 43.489 67.204 -31.314 1 41.2 ? S FNS 571 B 1 HETATM 10 O O1S FNS . . . D 2 44.433 67.486 -32.528 1 41.6 ? O1S FNS 571 B 1 HETATM 11 O O2S FNS . . . D 2 42.807 65.823 -31.53 1 40.36 ? O2S FNS 571 B 1 HETATM 12 O O3S FNS . . . D 2 44.335 67.138 -30.005 1 41.03 ? O3S FNS 571 B 1 HETATM 13 C C5A FNS . . . D 2 41.15 68.397 -30.349 1 25.6 ? C5A FNS 571 B 1 HETATM 14 C C6 FNS . . . D 2 40.45 67.22 -30.239 1 24.07 ? C6 FNS 571 B 1 HETATM 15 C C7 FNS . . . D 2 39.689 66.987 -29.111 1 20.24 ? C7 FNS 571 B 1 HETATM 16 C C7M FNS . . . D 2 38.889 65.701 -29.04 1 16.96 ? C7M FNS 571 B 1 HETATM 17 C C8 FNS . . . D 2 39.626 67.951 -28.11 1 19.08 ? C8 FNS 571 B 1 HETATM 18 C C8M FNS . . . D 2 38.786 67.728 -26.887 1 18.89 ? C8M FNS 571 B 1 HETATM 19 C C9 FNS . . . D 2 40.261 69.159 -28.272 1 21.03 ? C9 FNS 571 B 1 HETATM 20 C C9A FNS . . . D 2 41.001 69.392 -29.408 1 23.63 ? C9A FNS 571 B 1 HETATM 21 N N10 FNS . . . D 2 41.688 70.588 -29.691 1 23.22 ? N10 FNS 571 B 1 HETATM 22 C C10 FNS . . . D 2 42.275 70.827 -30.927 1 23.31 ? C10 FNS 571 B 1 HETATM 23 C C1' FNS . . . D 2 41.762 71.561 -28.792 1 19.31 ? C1' FNS 571 B 1 HETATM 24 C C2' FNS . . . D 2 40.649 72.551 -29.03 1 18.28 ? C2' FNS 571 B 1 HETATM 25 O O2' FNS . . . D 2 40.957 73.371 -30.181 1 13.22 ? O2' FNS 571 B 1 HETATM 26 C C3' FNS . . . D 2 40.431 73.347 -27.761 1 16.81 ? C3' FNS 571 B 1 HETATM 27 O O3' FNS . . . D 2 41.677 73.988 -27.414 1 20.43 ? O3' FNS 571 B 1 HETATM 28 C C4' FNS . . . D 2 39.982 72.485 -26.607 1 14.59 ? C4' FNS 571 B 1 HETATM 29 O O4' FNS . . . D 2 38.989 71.505 -26.868 1 15.51 ? O4' FNS 571 B 1 HETATM 30 C C5' FNS . . . D 2 39.474 73.455 -25.64 1 14.3 ? C5' FNS 571 B 1 HETATM 31 O O5' FNS . . . D 2 39.35 72.835 -24.4 1 17.89 ? O5' FNS 571 B 1 HETATM 32 P P FNS . . . D 2 37.93 72.417 -23.812 1 19.45 ? P FNS 571 B 1 HETATM 33 O O1P FNS . . . D 2 37.571 71.222 -24.603 1 18.75 ? O1P FNS 571 B 1 HETATM 34 O O2P FNS . . . D 2 37.069 73.628 -23.998 1 19.23 ? O2P FNS 571 B 1 HETATM 35 O O3P FNS . . . D 2 38.342 72.141 -22.417 1 20.43 ? O3P FNS 571 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #