data_1QDQ # _model_server_result.job_id u2Io37CCi_cIllpEsMdXWQ _model_server_result.datetime_utc '2025-03-06 08:20:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qdq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":254}' # _entry.id 1QDQ # _exptl.entry_id 1QDQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.455 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[PROPYLAMINO-3-HYDROXY-BUTAN-1,4-DIONYL]-ISOLEUCYL-PROLINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QDQ _cell.length_a 73.06 _cell.length_b 73.06 _cell.length_c 141.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QDQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 26 A CYS 26 1_555 A SG CYS 71 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? disulf ? disulf3 A SG CYS 62 A CYS 62 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? disulf ? disulf4 A SG CYS 63 A CYS 63 1_555 A SG CYS 67 A CYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf5 A SG CYS 100 A CYS 100 1_555 A SG CYS 132 A CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf6 A SG CYS 108 A CYS 108 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? disulf ? disulf7 A SG CYS 148 A CYS 148 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? covale ? covale1 A SG CYS 29 A CYS 29 1_555 B C6 074 . A 074 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? # _chem_comp.formula 'C18 H31 N3 O6' _chem_comp.formula_weight 385.455 _chem_comp.id 074 _chem_comp.mon_nstd_flag . _chem_comp.name '[PROPYLAMINO-3-HYDROXY-BUTAN-1,4-DIONYL]-ISOLEUCYL-PROLINE' _chem_comp.type peptide-like _chem_comp.pdbx_synonyms CA-074;[N-(L-3-TRANS-PROPYLCARBAMOYL-OXIRANE-2-CARBONYL)-L-ISOLEUCYL-L-PROLINE] # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 074 sing 1 n n C1 H11 074 sing 2 n n C1 H12 074 sing 3 n n C1 H13 074 sing 4 n n C2 C3 074 sing 5 n n C2 H21 074 sing 6 n n C2 H22 074 sing 7 n n C3 N1 074 sing 8 n n C3 H31 074 sing 9 n n C3 H32 074 sing 10 n n N1 C4 074 sing 11 n n N1 HN11 074 sing 12 n n C4 O1 074 doub 13 n n C4 C5 074 sing 14 n n C5 C6 074 sing 15 n n C5 O2 074 sing 16 n n C5 H51 074 sing 17 n n C6 C7 074 sing 18 n n C6 H61 074 sing 19 n n C6 H62 074 sing 20 n n O2 HO21 074 sing 21 n n C7 O3 074 doub 22 n n C7 N2 074 sing 23 n n N2 C8 074 sing 24 n n N2 HN21 074 sing 25 n n C8 C9 074 sing 26 n n C8 C13 074 sing 27 n n C8 H81 074 sing 28 n n C9 C10 074 sing 29 n n C9 C11 074 sing 30 n n C9 H91 074 sing 31 n n C10 H101 074 sing 32 n n C10 H102 074 sing 33 n n C10 H103 074 sing 34 n n C11 C12 074 sing 35 n n C11 H111 074 sing 36 n n C11 H112 074 sing 37 n n C12 H121 074 sing 38 n n C12 H122 074 sing 39 n n C12 H123 074 sing 40 n n C13 O4 074 doub 41 n n C13 N3 074 sing 42 n n N3 C14 074 sing 43 n n N3 C17 074 sing 44 n n C14 C15 074 sing 45 n n C14 H141 074 sing 46 n n C14 H142 074 sing 47 n n C15 C16 074 sing 48 n n C15 H151 074 sing 49 n n C15 H152 074 sing 50 n n C16 C17 074 sing 51 n n C16 H161 074 sing 52 n n C16 H162 074 sing 53 n n C17 C18 074 sing 54 n n C17 H171 074 sing 55 n n C18 O 074 doub 56 n n C18 OT 074 sing 57 n n OT HXT 074 sing 58 n n # _atom_sites.entry_id 1QDQ _atom_sites.fract_transf_matrix[1][1] 0.013687 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013687 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 074 A 1 254 254 074 074 . C 3 HOH A 1 255 1 HOH TIP . C 3 HOH A 2 256 2 HOH TIP . C 3 HOH A 3 257 3 HOH TIP . C 3 HOH A 4 258 4 HOH TIP . C 3 HOH A 5 259 5 HOH TIP . C 3 HOH A 6 260 6 HOH TIP . C 3 HOH A 7 261 7 HOH TIP . C 3 HOH A 8 262 8 HOH TIP . C 3 HOH A 9 263 9 HOH TIP . C 3 HOH A 10 264 10 HOH TIP . C 3 HOH A 11 265 11 HOH TIP . C 3 HOH A 12 266 12 HOH TIP . C 3 HOH A 13 267 13 HOH TIP . C 3 HOH A 14 268 14 HOH TIP . C 3 HOH A 15 269 15 HOH TIP . C 3 HOH A 16 270 16 HOH TIP . C 3 HOH A 17 271 17 HOH TIP . C 3 HOH A 18 272 18 HOH TIP . C 3 HOH A 19 273 19 HOH TIP . C 3 HOH A 20 274 20 HOH TIP . C 3 HOH A 21 275 21 HOH TIP . C 3 HOH A 22 276 22 HOH TIP . C 3 HOH A 23 277 23 HOH TIP . C 3 HOH A 24 278 24 HOH TIP . C 3 HOH A 25 279 25 HOH TIP . C 3 HOH A 26 280 26 HOH TIP . C 3 HOH A 27 281 27 HOH TIP . C 3 HOH A 28 282 28 HOH TIP . C 3 HOH A 29 283 29 HOH TIP . C 3 HOH A 30 284 30 HOH TIP . C 3 HOH A 31 285 31 HOH TIP . C 3 HOH A 32 286 32 HOH TIP . C 3 HOH A 33 287 33 HOH TIP . C 3 HOH A 34 288 34 HOH TIP . C 3 HOH A 35 289 35 HOH TIP . C 3 HOH A 36 290 36 HOH TIP . C 3 HOH A 37 291 37 HOH TIP . C 3 HOH A 38 292 38 HOH TIP . C 3 HOH A 39 293 39 HOH TIP . C 3 HOH A 40 294 40 HOH TIP . C 3 HOH A 41 295 41 HOH TIP . C 3 HOH A 42 296 42 HOH TIP . C 3 HOH A 43 297 43 HOH TIP . C 3 HOH A 44 298 44 HOH TIP . C 3 HOH A 45 299 45 HOH TIP . C 3 HOH A 46 300 46 HOH TIP . C 3 HOH A 47 301 47 HOH TIP . C 3 HOH A 48 302 48 HOH TIP . C 3 HOH A 49 303 49 HOH TIP . C 3 HOH A 50 304 50 HOH TIP . C 3 HOH A 51 305 51 HOH TIP . C 3 HOH A 52 306 52 HOH TIP . C 3 HOH A 53 307 53 HOH TIP . C 3 HOH A 54 308 54 HOH TIP . C 3 HOH A 55 309 55 HOH TIP . C 3 HOH A 56 310 56 HOH TIP . C 3 HOH A 57 311 57 HOH TIP . C 3 HOH A 58 312 58 HOH TIP . C 3 HOH A 59 313 59 HOH TIP . C 3 HOH A 60 314 60 HOH TIP . C 3 HOH A 61 315 61 HOH TIP . C 3 HOH A 62 316 62 HOH TIP . C 3 HOH A 63 317 63 HOH TIP . C 3 HOH A 64 318 64 HOH TIP . C 3 HOH A 65 319 65 HOH TIP . C 3 HOH A 66 320 66 HOH TIP . C 3 HOH A 67 321 67 HOH TIP . C 3 HOH A 68 322 68 HOH TIP . C 3 HOH A 69 323 69 HOH TIP . C 3 HOH A 70 324 70 HOH TIP . C 3 HOH A 71 325 71 HOH TIP . C 3 HOH A 72 326 72 HOH TIP . C 3 HOH A 73 327 73 HOH TIP . C 3 HOH A 74 328 74 HOH TIP . C 3 HOH A 75 329 75 HOH TIP . C 3 HOH A 76 330 76 HOH TIP . C 3 HOH A 77 331 77 HOH TIP . C 3 HOH A 78 332 78 HOH TIP . C 3 HOH A 79 333 79 HOH TIP . C 3 HOH A 80 334 80 HOH TIP . C 3 HOH A 81 335 81 HOH TIP . C 3 HOH A 82 336 82 HOH TIP . C 3 HOH A 83 337 83 HOH TIP . C 3 HOH A 84 338 84 HOH TIP . C 3 HOH A 85 339 85 HOH TIP . C 3 HOH A 86 340 86 HOH TIP . C 3 HOH A 87 341 87 HOH TIP . C 3 HOH A 88 342 88 HOH TIP . C 3 HOH A 89 343 89 HOH TIP . C 3 HOH A 90 344 90 HOH TIP . C 3 HOH A 91 345 91 HOH TIP . C 3 HOH A 92 346 92 HOH TIP . C 3 HOH A 93 347 93 HOH TIP . C 3 HOH A 94 348 94 HOH TIP . C 3 HOH A 95 349 95 HOH TIP . C 3 HOH A 96 350 96 HOH TIP . C 3 HOH A 97 351 97 HOH TIP . C 3 HOH A 98 352 98 HOH TIP . C 3 HOH A 99 353 99 HOH TIP . C 3 HOH A 100 354 100 HOH TIP . C 3 HOH A 101 355 101 HOH TIP . C 3 HOH A 102 356 102 HOH TIP . C 3 HOH A 103 357 103 HOH TIP . C 3 HOH A 104 358 104 HOH TIP . C 3 HOH A 105 359 105 HOH TIP . C 3 HOH A 106 360 106 HOH TIP . C 3 HOH A 107 361 107 HOH TIP . C 3 HOH A 108 362 108 HOH TIP . C 3 HOH A 109 363 109 HOH TIP . C 3 HOH A 110 364 110 HOH TIP . C 3 HOH A 111 365 111 HOH TIP . C 3 HOH A 112 366 112 HOH TIP . C 3 HOH A 113 367 113 HOH TIP . C 3 HOH A 114 368 114 HOH TIP . C 3 HOH A 115 369 115 HOH TIP . C 3 HOH A 116 370 116 HOH TIP . C 3 HOH A 117 371 117 HOH TIP . C 3 HOH A 118 372 118 HOH TIP . C 3 HOH A 119 373 119 HOH TIP . C 3 HOH A 120 374 120 HOH TIP . C 3 HOH A 121 375 121 HOH TIP . C 3 HOH A 122 376 122 HOH TIP . C 3 HOH A 123 377 123 HOH TIP . C 3 HOH A 124 378 124 HOH TIP . C 3 HOH A 125 379 125 HOH TIP . C 3 HOH A 126 380 126 HOH TIP . C 3 HOH A 127 381 127 HOH TIP . C 3 HOH A 128 382 128 HOH TIP . C 3 HOH A 129 383 129 HOH TIP . C 3 HOH A 130 384 130 HOH TIP . C 3 HOH A 131 385 131 HOH TIP . C 3 HOH A 132 386 132 HOH TIP . C 3 HOH A 133 387 133 HOH TIP . C 3 HOH A 134 388 134 HOH TIP . C 3 HOH A 135 389 135 HOH TIP . C 3 HOH A 136 390 136 HOH TIP . C 3 HOH A 137 391 137 HOH TIP . C 3 HOH A 138 392 138 HOH TIP . C 3 HOH A 139 393 139 HOH TIP . C 3 HOH A 140 394 140 HOH TIP . C 3 HOH A 141 395 141 HOH TIP . C 3 HOH A 142 396 142 HOH TIP . C 3 HOH A 143 397 143 HOH TIP . C 3 HOH A 144 398 144 HOH TIP . C 3 HOH A 145 399 145 HOH TIP . C 3 HOH A 146 400 146 HOH TIP . C 3 HOH A 147 401 147 HOH TIP . C 3 HOH A 148 402 148 HOH TIP . C 3 HOH A 149 403 149 HOH TIP . C 3 HOH A 150 404 150 HOH TIP . C 3 HOH A 151 405 151 HOH TIP . C 3 HOH A 152 406 152 HOH TIP . C 3 HOH A 153 407 153 HOH TIP . C 3 HOH A 154 408 154 HOH TIP . C 3 HOH A 155 409 155 HOH TIP . C 3 HOH A 156 410 156 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 074 . . . B 2 17.218 20.475 -3.816 3 1 ? C1 074 254 A 1 HETATM 2 C C2 074 . . . B 2 16.027 20.436 -4.78 2 2 ? C2 074 254 A 1 HETATM 3 C C3 074 . . . B 2 15.786 18.993 -5.12 2 3 ? C3 074 254 A 1 HETATM 4 N N1 074 . . . B 2 14.442 18.765 -5.629 1 4 ? N1 074 254 A 1 HETATM 5 C C4 074 . . . B 2 14.173 18.818 -6.932 0 5 ? C4 074 254 A 1 HETATM 6 O O1 074 . . . B 2 15.019 19.137 -7.766 0 6 ? O1 074 254 A 1 HETATM 7 C C5 074 . . . B 2 12.752 18.514 -7.412 1 7 ? C5 074 254 A 1 HETATM 8 O O2 074 . . . B 2 12.077 17.382 -6.835 1 9 ? O2 074 254 A 1 HETATM 9 C C6 074 . . . B 2 11.87 19.816 -7.209 2 8 ? C6 074 254 A 1 HETATM 10 C C7 074 . . . B 2 10.502 19.607 -7.844 0 10 ? C7 074 254 A 1 HETATM 11 O O3 074 . . . B 2 10.304 19.904 -9.03 0 11 ? O3 074 254 A 1 HETATM 12 N N2 074 . . . B 2 9.604 19.137 -6.95 1 12 ? N2 074 254 A 1 HETATM 13 C C8 074 . . . B 2 8.224 18.767 -7.251 1 13 ? C8 074 254 A 1 HETATM 14 C C13 074 . . . B 2 7.406 19.748 -8.069 0 18 ? C13 074 254 A 1 HETATM 15 O O4 074 . . . B 2 7.529 20.972 -7.931 0 19 ? O4 074 254 A 1 HETATM 16 C C9 074 . . . B 2 7.365 18.505 -5.967 1 14 ? C9 074 254 A 1 HETATM 17 C C11 074 . . . B 2 7.394 19.662 -4.972 2 16 ? C11 074 254 A 1 HETATM 18 C C10 074 . . . B 2 7.914 17.228 -5.333 3 15 ? C10 074 254 A 1 HETATM 19 C C12 074 . . . B 2 6.173 19.629 -4.026 3 17 ? C12 074 254 A 1 HETATM 20 N N3 074 . . . B 2 6.564 19.195 -8.954 0 20 ? N3 074 254 A 1 HETATM 21 C C17 074 . . . B 2 5.567 19.974 -9.663 1 24 ? C17 074 254 A 1 HETATM 22 C C18 074 . . . B 2 4.296 20.168 -8.795 0 25 ? C18 074 254 A 1 HETATM 23 O O 074 . . . B 2 4.221 19.655 -7.669 0 26 ? O 074 254 A 1 HETATM 24 C C16 074 . . . B 2 5.422 19.148 -10.942 2 23 ? C16 074 254 A 1 HETATM 25 C C15 074 . . . B 2 5.612 17.699 -10.542 2 22 ? C15 074 254 A 1 HETATM 26 C C14 074 . . . B 2 6.689 17.824 -9.486 2 21 ? C14 074 254 A 1 HETATM 27 O OT 074 . . . B 2 3.413 20.928 -9.182 0 27 ? OT 074 254 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #