data_1QFE # _model_server_result.job_id CxYowopj7F2z2bDLET-kmQ _model_server_result.datetime_utc '2024-11-28 20:18:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qfe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 1QFE # _exptl.entry_id 1QFE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 172.159 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.48 _cell.angle_gamma 90 _cell.entry_id 1QFE _cell.length_a 60.49 _cell.length_b 45.39 _cell.length_c 85.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QFE _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 170 A LYS 170 1_555 C C3 DHS . A DHS 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale2 B NZ LYS 170 B LYS 170 1_555 D C3 DHS . B DHS 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? # _chem_comp.formula 'C7 H10 N O4 -1' _chem_comp.formula_weight 172.159 _chem_comp.id DHS _chem_comp.mon_nstd_flag . _chem_comp.name 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C3 DHS sing 70 n n N HN1 DHS sing 71 n n N HN2 DHS sing 72 n n C1 C6 DHS sing 73 n n C1 C7 DHS sing 74 n n C1 C2 DHS doub 75 n n C3 C4 DHS sing 76 n n C3 C2 DHS sing 77 n n C3 H3 DHS sing 78 n n C4 C5 DHS sing 79 n n C4 O2 DHS sing 80 n n C4 H4 DHS sing 81 n n C5 C6 DHS sing 82 n n C5 O3 DHS sing 83 n n C5 H5 DHS sing 84 n n C6 H61 DHS sing 85 n n C6 H62 DHS sing 86 n n C7 O4 DHS sing 87 n n C7 O5 DHS doub 88 n n C2 H2 DHS sing 89 n n O2 HO2 DHS sing 90 n n O3 HO3 DHS sing 91 n n # _atom_sites.entry_id 1QFE _atom_sites.fract_transf_matrix[1][1] 0.016532 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001586 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011754 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DHS A 1 301 301 DHS DHS . D 2 DHS B 1 301 301 DHS DHS . E 3 HOH A 1 401 401 HOH HOH . E 3 HOH A 2 402 402 HOH HOH . E 3 HOH A 3 404 404 HOH HOH . E 3 HOH A 4 406 406 HOH HOH . E 3 HOH A 5 408 408 HOH HOH . E 3 HOH A 6 409 409 HOH HOH . E 3 HOH A 7 413 413 HOH HOH . E 3 HOH A 8 415 415 HOH HOH . E 3 HOH A 9 416 416 HOH HOH . E 3 HOH A 10 417 417 HOH HOH . E 3 HOH A 11 422 422 HOH HOH . E 3 HOH A 12 423 423 HOH HOH . E 3 HOH A 13 427 427 HOH HOH . E 3 HOH A 14 428 428 HOH HOH . E 3 HOH A 15 429 429 HOH HOH . E 3 HOH A 16 430 430 HOH HOH . E 3 HOH A 17 432 432 HOH HOH . E 3 HOH A 18 433 433 HOH HOH . E 3 HOH A 19 436 436 HOH HOH . E 3 HOH A 20 437 437 HOH HOH . E 3 HOH A 21 438 438 HOH HOH . E 3 HOH A 22 441 441 HOH HOH . E 3 HOH A 23 444 444 HOH HOH . E 3 HOH A 24 445 445 HOH HOH . E 3 HOH A 25 447 447 HOH HOH . E 3 HOH A 26 448 448 HOH HOH . E 3 HOH A 27 451 451 HOH HOH . E 3 HOH A 28 454 454 HOH HOH . E 3 HOH A 29 455 455 HOH HOH . E 3 HOH A 30 459 459 HOH HOH . E 3 HOH A 31 461 461 HOH HOH . E 3 HOH A 32 462 462 HOH HOH . E 3 HOH A 33 466 466 HOH HOH . E 3 HOH A 34 470 470 HOH HOH . E 3 HOH A 35 473 473 HOH HOH . E 3 HOH A 36 477 477 HOH HOH . E 3 HOH A 37 479 479 HOH HOH . E 3 HOH A 38 480 480 HOH HOH . E 3 HOH A 39 482 482 HOH HOH . E 3 HOH A 40 484 484 HOH HOH . E 3 HOH A 41 485 485 HOH HOH . E 3 HOH A 42 486 486 HOH HOH . E 3 HOH A 43 488 488 HOH HOH . E 3 HOH A 44 489 489 HOH HOH . E 3 HOH A 45 497 497 HOH HOH . E 3 HOH A 46 500 500 HOH HOH . E 3 HOH A 47 508 508 HOH HOH . E 3 HOH A 48 509 509 HOH HOH . E 3 HOH A 49 510 510 HOH HOH . E 3 HOH A 50 512 512 HOH HOH . E 3 HOH A 51 513 513 HOH HOH . E 3 HOH A 52 516 516 HOH HOH . E 3 HOH A 53 517 517 HOH HOH . E 3 HOH A 54 518 518 HOH HOH . E 3 HOH A 55 521 521 HOH HOH . E 3 HOH A 56 522 522 HOH HOH . E 3 HOH A 57 530 530 HOH HOH . E 3 HOH A 58 532 532 HOH HOH . E 3 HOH A 59 533 533 HOH HOH . E 3 HOH A 60 534 534 HOH HOH . F 3 HOH B 1 400 400 HOH HOH . F 3 HOH B 2 403 403 HOH HOH . F 3 HOH B 3 405 405 HOH HOH . F 3 HOH B 4 407 407 HOH HOH . F 3 HOH B 5 410 410 HOH HOH . F 3 HOH B 6 411 411 HOH HOH . F 3 HOH B 7 412 412 HOH HOH . F 3 HOH B 8 414 414 HOH HOH . F 3 HOH B 9 418 418 HOH HOH . F 3 HOH B 10 419 419 HOH HOH . F 3 HOH B 11 420 420 HOH HOH . F 3 HOH B 12 421 421 HOH HOH . F 3 HOH B 13 424 424 HOH HOH . F 3 HOH B 14 425 425 HOH HOH . F 3 HOH B 15 426 426 HOH HOH . F 3 HOH B 16 431 431 HOH HOH . F 3 HOH B 17 434 434 HOH HOH . F 3 HOH B 18 435 435 HOH HOH . F 3 HOH B 19 439 439 HOH HOH . F 3 HOH B 20 440 440 HOH HOH . F 3 HOH B 21 442 442 HOH HOH . F 3 HOH B 22 443 443 HOH HOH . F 3 HOH B 23 446 446 HOH HOH . F 3 HOH B 24 449 449 HOH HOH . F 3 HOH B 25 450 450 HOH HOH . F 3 HOH B 26 452 452 HOH HOH . F 3 HOH B 27 453 453 HOH HOH . F 3 HOH B 28 456 456 HOH HOH . F 3 HOH B 29 457 457 HOH HOH . F 3 HOH B 30 458 458 HOH HOH . F 3 HOH B 31 460 460 HOH HOH . F 3 HOH B 32 463 463 HOH HOH . F 3 HOH B 33 464 464 HOH HOH . F 3 HOH B 34 465 465 HOH HOH . F 3 HOH B 35 467 467 HOH HOH . F 3 HOH B 36 468 468 HOH HOH . F 3 HOH B 37 469 469 HOH HOH . F 3 HOH B 38 471 471 HOH HOH . F 3 HOH B 39 472 472 HOH HOH . F 3 HOH B 40 474 474 HOH HOH . F 3 HOH B 41 475 475 HOH HOH . F 3 HOH B 42 476 476 HOH HOH . F 3 HOH B 43 478 478 HOH HOH . F 3 HOH B 44 481 481 HOH HOH . F 3 HOH B 45 483 483 HOH HOH . F 3 HOH B 46 487 487 HOH HOH . F 3 HOH B 47 490 490 HOH HOH . F 3 HOH B 48 491 491 HOH HOH . F 3 HOH B 49 492 492 HOH HOH . F 3 HOH B 50 493 493 HOH HOH . F 3 HOH B 51 494 494 HOH HOH . F 3 HOH B 52 495 495 HOH HOH . F 3 HOH B 53 496 496 HOH HOH . F 3 HOH B 54 498 498 HOH HOH . F 3 HOH B 55 499 499 HOH HOH . F 3 HOH B 56 501 501 HOH HOH . F 3 HOH B 57 502 502 HOH HOH . F 3 HOH B 58 503 503 HOH HOH . F 3 HOH B 59 504 504 HOH HOH . F 3 HOH B 60 505 505 HOH HOH . F 3 HOH B 61 506 506 HOH HOH . F 3 HOH B 62 507 507 HOH HOH . F 3 HOH B 63 511 511 HOH HOH . F 3 HOH B 64 514 514 HOH HOH . F 3 HOH B 65 515 515 HOH HOH . F 3 HOH B 66 519 519 HOH HOH . F 3 HOH B 67 520 520 HOH HOH . F 3 HOH B 68 523 523 HOH HOH . F 3 HOH B 69 524 524 HOH HOH . F 3 HOH B 70 525 525 HOH HOH . F 3 HOH B 71 526 526 HOH HOH . F 3 HOH B 72 527 527 HOH HOH . F 3 HOH B 73 528 528 HOH HOH . F 3 HOH B 74 529 529 HOH HOH . F 3 HOH B 75 531 531 HOH HOH . F 3 HOH B 76 535 535 HOH HOH . F 3 HOH B 77 536 536 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHS . . . D 2 16.287 28.836 12.714 1 14.64 ? C1 DHS 301 B 1 HETATM 2 C C3 DHS . . . D 2 14.863 28.83 10.666 1 11.58 ? C3 DHS 301 B 1 HETATM 3 C C4 DHS . . . D 2 15.964 28.02 9.958 1 12.07 ? C4 DHS 301 B 1 HETATM 4 C C5 DHS . . . D 2 17.359 28.159 10.572 1 14.17 ? C5 DHS 301 B 1 HETATM 5 C C6 DHS . . . D 2 17.276 27.871 12.069 1 14.4 ? C6 DHS 301 B 1 HETATM 6 C C7 DHS . . . D 2 16.352 28.95 14.239 1 15.65 ? C7 DHS 301 B 1 HETATM 7 C C2 DHS . . . D 2 15.224 29.281 12.052 1 13.86 ? C2 DHS 301 B 1 HETATM 8 O O2 DHS . . . D 2 15.919 28.049 8.538 1 17.46 ? O2 DHS 301 B 1 HETATM 9 O O3 DHS . . . D 2 18.249 27.218 9.963 1 13.8 ? O3 DHS 301 B 1 HETATM 10 O O4 DHS . . . D 2 15.878 29.955 14.806 1 17.41 ? O4 DHS 301 B 1 HETATM 11 O O5 DHS . . . D 2 16.849 27.995 14.869 1 11.53 ? O5 DHS 301 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 11 #