data_1QHH # _model_server_result.job_id iysptVEF6z4Q4FYa63Jaqw _model_server_result.datetime_utc '2024-11-04 23:03:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qhh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":700}' # _entry.id 1QHH # _exptl.entry_id 1QHH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1QHH _cell.length_a 138.936 _cell.length_b 138.936 _cell.length_c 111.642 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QHH _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 1QHH _atom_sites.fract_transf_matrix[1][1] 0.007197 _atom_sites.fract_transf_matrix[1][2] 0.004155 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008957 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ATP A 1 700 700 ATP ATP . F 6 HOH A 1 701 701 HOH HOH . F 6 HOH A 2 702 702 HOH HOH . F 6 HOH A 3 703 703 HOH HOH . F 6 HOH A 4 704 704 HOH HOH . F 6 HOH A 5 705 705 HOH HOH . F 6 HOH A 6 706 706 HOH HOH . F 6 HOH A 7 707 707 HOH HOH . F 6 HOH A 8 708 708 HOH HOH . F 6 HOH A 9 709 709 HOH HOH . F 6 HOH A 10 710 710 HOH HOH . F 6 HOH A 11 711 711 HOH HOH . F 6 HOH A 12 712 712 HOH HOH . F 6 HOH A 13 713 713 HOH HOH . F 6 HOH A 14 714 714 HOH HOH . F 6 HOH A 15 724 724 HOH HOH . F 6 HOH A 16 729 729 HOH HOH . F 6 HOH A 17 753 753 HOH HOH . F 6 HOH A 18 754 754 HOH HOH . F 6 HOH A 19 755 755 HOH HOH . F 6 HOH A 20 756 756 HOH HOH . F 6 HOH A 21 757 757 HOH HOH . F 6 HOH A 22 758 758 HOH HOH . F 6 HOH A 23 759 759 HOH HOH . F 6 HOH A 24 774 774 HOH HOH . F 6 HOH A 25 780 780 HOH HOH . F 6 HOH A 26 781 781 HOH HOH . F 6 HOH A 27 782 782 HOH HOH . F 6 HOH A 28 786 786 HOH HOH . F 6 HOH A 29 787 787 HOH HOH . F 6 HOH A 30 789 789 HOH HOH . F 6 HOH A 31 790 790 HOH HOH . F 6 HOH A 32 794 794 HOH HOH . G 6 HOH B 1 715 715 HOH HOH . G 6 HOH B 2 716 716 HOH HOH . G 6 HOH B 3 717 717 HOH HOH . G 6 HOH B 4 718 718 HOH HOH . G 6 HOH B 5 719 719 HOH HOH . G 6 HOH B 6 720 720 HOH HOH . G 6 HOH B 7 721 721 HOH HOH . G 6 HOH B 8 722 722 HOH HOH . G 6 HOH B 9 723 723 HOH HOH . G 6 HOH B 10 725 725 HOH HOH . G 6 HOH B 11 726 726 HOH HOH . G 6 HOH B 12 727 727 HOH HOH . G 6 HOH B 13 728 728 HOH HOH . G 6 HOH B 14 730 730 HOH HOH . G 6 HOH B 15 731 731 HOH HOH . G 6 HOH B 16 732 732 HOH HOH . G 6 HOH B 17 733 733 HOH HOH . G 6 HOH B 18 734 734 HOH HOH . G 6 HOH B 19 735 735 HOH HOH . G 6 HOH B 20 736 736 HOH HOH . G 6 HOH B 21 737 737 HOH HOH . G 6 HOH B 22 738 738 HOH HOH . G 6 HOH B 23 741 741 HOH HOH . G 6 HOH B 24 742 742 HOH HOH . G 6 HOH B 25 743 743 HOH HOH . G 6 HOH B 26 745 745 HOH HOH . G 6 HOH B 27 746 746 HOH HOH . G 6 HOH B 28 748 748 HOH HOH . G 6 HOH B 29 760 760 HOH HOH . G 6 HOH B 30 761 761 HOH HOH . G 6 HOH B 31 762 762 HOH HOH . G 6 HOH B 32 763 763 HOH HOH . G 6 HOH B 33 765 765 HOH HOH . G 6 HOH B 34 766 766 HOH HOH . G 6 HOH B 35 768 768 HOH HOH . G 6 HOH B 36 769 769 HOH HOH . G 6 HOH B 37 770 770 HOH HOH . G 6 HOH B 38 771 771 HOH HOH . G 6 HOH B 39 773 773 HOH HOH . G 6 HOH B 40 775 775 HOH HOH . G 6 HOH B 41 778 778 HOH HOH . G 6 HOH B 42 783 783 HOH HOH . G 6 HOH B 43 784 784 HOH HOH . G 6 HOH B 44 791 791 HOH HOH . G 6 HOH B 45 792 792 HOH HOH . G 6 HOH B 46 793 793 HOH HOH . H 6 HOH C 1 776 776 HOH HOH . H 6 HOH C 2 777 777 HOH HOH . H 6 HOH C 3 785 785 HOH HOH . I 6 HOH D 1 739 739 HOH HOH . I 6 HOH D 2 740 740 HOH HOH . I 6 HOH D 3 744 744 HOH HOH . I 6 HOH D 4 747 747 HOH HOH . I 6 HOH D 5 749 749 HOH HOH . I 6 HOH D 6 750 750 HOH HOH . I 6 HOH D 7 751 751 HOH HOH . I 6 HOH D 8 752 752 HOH HOH . I 6 HOH D 9 764 764 HOH HOH . I 6 HOH D 10 767 767 HOH HOH . I 6 HOH D 11 772 772 HOH HOH . I 6 HOH D 12 779 779 HOH HOH . I 6 HOH D 13 788 788 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 5 81.507 3.417 40.141 1 38.63 ? PG ATP 700 A 1 HETATM 2 O O1G ATP . . . E 5 82.824 4.095 40.108 1 48.59 ? O1G ATP 700 A 1 HETATM 3 O O2G ATP . . . E 5 81.554 2.579 41.337 1 44.48 ? O2G ATP 700 A 1 HETATM 4 O O3G ATP . . . E 5 80.552 4.475 40.531 1 40 ? O3G ATP 700 A 1 HETATM 5 P PB ATP . . . E 5 82.528 1.633 38.331 1 27.82 ? PB ATP 700 A 1 HETATM 6 O O1B ATP . . . E 5 82.317 1.242 36.919 1 32.15 ? O1B ATP 700 A 1 HETATM 7 O O2B ATP . . . E 5 83.817 2.368 38.35 1 21.2 ? O2B ATP 700 A 1 HETATM 8 O O3B ATP . . . E 5 81.278 2.454 38.905 1 33.79 ? O3B ATP 700 A 1 HETATM 9 P PA ATP . . . E 5 82.169 -0.618 39.922 1 35.57 ? PA ATP 700 A 1 HETATM 10 O O1A ATP . . . E 5 80.775 -0.113 40.15 1 11.09 ? O1A ATP 700 A 1 HETATM 11 O O2A ATP . . . E 5 81.978 -1.869 39.125 1 27.38 ? O2A ATP 700 A 1 HETATM 12 O O3A ATP . . . E 5 82.891 0.357 39.036 1 33.16 ? O3A ATP 700 A 1 HETATM 13 O O5' ATP . . . E 5 82.977 -0.938 41.311 1 15.03 ? O5' ATP 700 A 1 HETATM 14 C C5' ATP . . . E 5 83.696 -2.189 41.436 1 16.19 ? C5' ATP 700 A 1 HETATM 15 C C4' ATP . . . E 5 84.418 -2.594 42.757 1 5.56 ? C4' ATP 700 A 1 HETATM 16 O O4' ATP . . . E 5 83.621 -3.267 43.768 1 9.38 ? O4' ATP 700 A 1 HETATM 17 C C3' ATP . . . E 5 85.599 -3.534 42.705 1 2.8 ? C3' ATP 700 A 1 HETATM 18 O O3' ATP . . . E 5 86.936 -3.185 42.429 1 17.34 ? O3' ATP 700 A 1 HETATM 19 C C2' ATP . . . E 5 85.104 -4.952 42.875 1 11.32 ? C2' ATP 700 A 1 HETATM 20 O O2' ATP . . . E 5 86.076 -5.937 43.188 1 17.66 ? O2' ATP 700 A 1 HETATM 21 C C1' ATP . . . E 5 84.064 -4.652 43.958 1 5.34 ? C1' ATP 700 A 1 HETATM 22 N N9 ATP . . . E 5 83.041 -5.73 44.24 1 2 ? N9 ATP 700 A 1 HETATM 23 C C8 ATP . . . E 5 81.736 -5.881 43.795 1 3.65 ? C8 ATP 700 A 1 HETATM 24 N N7 ATP . . . E 5 81.188 -7.015 44.377 1 7.91 ? N7 ATP 700 A 1 HETATM 25 C C5 ATP . . . E 5 82.16 -7.506 45.174 1 2 ? C5 ATP 700 A 1 HETATM 26 C C6 ATP . . . E 5 81.872 -8.61 45.887 1 2.01 ? C6 ATP 700 A 1 HETATM 27 N N6 ATP . . . E 5 80.605 -9.335 45.795 1 2 ? N6 ATP 700 A 1 HETATM 28 N N1 ATP . . . E 5 82.892 -9.025 46.679 1 2 ? N1 ATP 700 A 1 HETATM 29 C C2 ATP . . . E 5 84.053 -8.281 46.639 1 2.01 ? C2 ATP 700 A 1 HETATM 30 N N3 ATP . . . E 5 84.296 -7.165 45.88 1 2.01 ? N3 ATP 700 A 1 HETATM 31 C C4 ATP . . . E 5 83.256 -6.764 45.107 1 2 ? C4 ATP 700 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #