data_1QJ1 # _model_server_result.job_id 4--0QFqXreN5o8e0hg7W6Q _model_server_result.datetime_utc '2024-10-16 10:35:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1248}' # _entry.id 1QJ1 # _exptl.entry_id 1QJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 382.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-CARBAMIMIDOYL-2-[2-HYDROXY-6-(4-HYDROXY-PHENYL)-INDAN-1-YL]-HEXANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.9 _cell.angle_gamma 90 _cell.entry_id 1QJ1 _cell.length_a 71.7 _cell.length_b 71.9 _cell.length_c 73 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 1 1_555 B SG CYS 119 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? disulf ? disulf2 B SG CYS 28 B CYS 42 1_555 B SG CYS 44 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 173 B CYS 168 1_555 B SG CYS 187 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 B SG CYS 201 B CYS 191 1_555 B SG CYS 231 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? covale ? covale1 B OG SER 205 B SER 195 1_555 D C15 166 . B 166 1248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.254 ? covale ? covale2 C C GLU 8 I GLU 62 1_555 C N TYS 9 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 C C TYS 9 I TYS 63 1_555 C N LEU 10 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C22 H26 N2 O4' _chem_comp.formula_weight 382.453 _chem_comp.id 166 _chem_comp.mon_nstd_flag . _chem_comp.name '6-CARBAMIMIDOYL-2-[2-HYDROXY-6-(4-HYDROXY-PHENYL)-INDAN-1-YL]-HEXANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GR166081 # _atom_sites.entry_id 1QJ1 _atom_sites.fract_transf_matrix[1][1] 0.013947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002686 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 166 B 1 1248 1248 166 166 . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH B 1 2001 2001 HOH HOH . F 5 HOH B 2 2002 2002 HOH HOH . F 5 HOH B 3 2003 2003 HOH HOH . F 5 HOH B 4 2004 2004 HOH HOH . F 5 HOH B 5 2005 2005 HOH HOH . F 5 HOH B 6 2006 2006 HOH HOH . F 5 HOH B 7 2007 2007 HOH HOH . F 5 HOH B 8 2008 2008 HOH HOH . F 5 HOH B 9 2009 2009 HOH HOH . F 5 HOH B 10 2010 2010 HOH HOH . F 5 HOH B 11 2011 2011 HOH HOH . F 5 HOH B 12 2012 2012 HOH HOH . F 5 HOH B 13 2013 2013 HOH HOH . F 5 HOH B 14 2014 2014 HOH HOH . F 5 HOH B 15 2015 2015 HOH HOH . F 5 HOH B 16 2016 2016 HOH HOH . F 5 HOH B 17 2017 2017 HOH HOH . F 5 HOH B 18 2018 2018 HOH HOH . F 5 HOH B 19 2019 2019 HOH HOH . F 5 HOH B 20 2020 2020 HOH HOH . F 5 HOH B 21 2021 2021 HOH HOH . F 5 HOH B 22 2022 2022 HOH HOH . F 5 HOH B 23 2023 2023 HOH HOH . F 5 HOH B 24 2024 2024 HOH HOH . F 5 HOH B 25 2025 2025 HOH HOH . F 5 HOH B 26 2026 2026 HOH HOH . F 5 HOH B 27 2027 2027 HOH HOH . F 5 HOH B 28 2028 2028 HOH HOH . F 5 HOH B 29 2029 2029 HOH HOH . F 5 HOH B 30 2030 2030 HOH HOH . F 5 HOH B 31 2031 2031 HOH HOH . F 5 HOH B 32 2032 2032 HOH HOH . F 5 HOH B 33 2033 2033 HOH HOH . F 5 HOH B 34 2034 2034 HOH HOH . F 5 HOH B 35 2035 2035 HOH HOH . F 5 HOH B 36 2036 2036 HOH HOH . F 5 HOH B 37 2037 2037 HOH HOH . F 5 HOH B 38 2038 2038 HOH HOH . F 5 HOH B 39 2039 2039 HOH HOH . F 5 HOH B 40 2040 2040 HOH HOH . F 5 HOH B 41 2041 2041 HOH HOH . F 5 HOH B 42 2042 2042 HOH HOH . F 5 HOH B 43 2043 2043 HOH HOH . F 5 HOH B 44 2044 2044 HOH HOH . F 5 HOH B 45 2045 2045 HOH HOH . F 5 HOH B 46 2046 2046 HOH HOH . F 5 HOH B 47 2047 2047 HOH HOH . F 5 HOH B 48 2048 2048 HOH HOH . F 5 HOH B 49 2049 2049 HOH HOH . F 5 HOH B 50 2050 2050 HOH HOH . F 5 HOH B 51 2051 2051 HOH HOH . F 5 HOH B 52 2052 2052 HOH HOH . F 5 HOH B 53 2053 2053 HOH HOH . F 5 HOH B 54 2054 2054 HOH HOH . F 5 HOH B 55 2055 2055 HOH HOH . F 5 HOH B 56 2056 2056 HOH HOH . F 5 HOH B 57 2057 2057 HOH HOH . F 5 HOH B 58 2058 2058 HOH HOH . F 5 HOH B 59 2059 2059 HOH HOH . F 5 HOH B 60 2060 2060 HOH HOH . F 5 HOH B 61 2061 2061 HOH HOH . F 5 HOH B 62 2062 2062 HOH HOH . F 5 HOH B 63 2063 2063 HOH HOH . F 5 HOH B 64 2064 2064 HOH HOH . F 5 HOH B 65 2065 2065 HOH HOH . F 5 HOH B 66 2066 2066 HOH HOH . F 5 HOH B 67 2067 2067 HOH HOH . F 5 HOH B 68 2068 2068 HOH HOH . F 5 HOH B 69 2069 2069 HOH HOH . F 5 HOH B 70 2070 2070 HOH HOH . F 5 HOH B 71 2071 2071 HOH HOH . F 5 HOH B 72 2072 2072 HOH HOH . F 5 HOH B 73 2073 2073 HOH HOH . F 5 HOH B 74 2074 2074 HOH HOH . F 5 HOH B 75 2075 2075 HOH HOH . F 5 HOH B 76 2076 2076 HOH HOH . F 5 HOH B 77 2077 2077 HOH HOH . F 5 HOH B 78 2078 2078 HOH HOH . F 5 HOH B 79 2079 2079 HOH HOH . F 5 HOH B 80 2080 2080 HOH HOH . F 5 HOH B 81 2081 2081 HOH HOH . F 5 HOH B 82 2082 2082 HOH HOH . F 5 HOH B 83 2083 2083 HOH HOH . F 5 HOH B 84 2084 2084 HOH HOH . F 5 HOH B 85 2085 2085 HOH HOH . F 5 HOH B 86 2086 2086 HOH HOH . F 5 HOH B 87 2087 2087 HOH HOH . F 5 HOH B 88 2088 2088 HOH HOH . F 5 HOH B 89 2089 2089 HOH HOH . F 5 HOH B 90 2090 2090 HOH HOH . F 5 HOH B 91 2091 2091 HOH HOH . F 5 HOH B 92 2092 2092 HOH HOH . F 5 HOH B 93 2093 2093 HOH HOH . F 5 HOH B 94 2094 2094 HOH HOH . F 5 HOH B 95 2095 2095 HOH HOH . F 5 HOH B 96 2096 2096 HOH HOH . F 5 HOH B 97 2097 2097 HOH HOH . F 5 HOH B 98 2098 2098 HOH HOH . F 5 HOH B 99 2099 2099 HOH HOH . F 5 HOH B 100 2100 2100 HOH HOH . F 5 HOH B 101 2101 2101 HOH HOH . F 5 HOH B 102 2102 2102 HOH HOH . F 5 HOH B 103 2103 2103 HOH HOH . F 5 HOH B 104 2104 2104 HOH HOH . F 5 HOH B 105 2105 2105 HOH HOH . F 5 HOH B 106 2106 2106 HOH HOH . F 5 HOH B 107 2107 2107 HOH HOH . F 5 HOH B 108 2108 2108 HOH HOH . F 5 HOH B 109 2109 2109 HOH HOH . F 5 HOH B 110 2110 2110 HOH HOH . F 5 HOH B 111 2111 2111 HOH HOH . F 5 HOH B 112 2112 2112 HOH HOH . F 5 HOH B 113 2113 2113 HOH HOH . F 5 HOH B 114 2114 2114 HOH HOH . F 5 HOH B 115 2115 2115 HOH HOH . F 5 HOH B 116 2116 2116 HOH HOH . F 5 HOH B 117 2117 2117 HOH HOH . F 5 HOH B 118 2118 2118 HOH HOH . F 5 HOH B 119 2119 2119 HOH HOH . F 5 HOH B 120 2120 2120 HOH HOH . F 5 HOH B 121 2121 2121 HOH HOH . F 5 HOH B 122 2122 2122 HOH HOH . F 5 HOH B 123 2123 2123 HOH HOH . F 5 HOH B 124 2124 2124 HOH HOH . F 5 HOH B 125 2125 2125 HOH HOH . F 5 HOH B 126 2126 2126 HOH HOH . F 5 HOH B 127 2127 2127 HOH HOH . F 5 HOH B 128 2128 2128 HOH HOH . F 5 HOH B 129 2129 2129 HOH HOH . F 5 HOH B 130 2130 2130 HOH HOH . F 5 HOH B 131 2131 2131 HOH HOH . F 5 HOH B 132 2132 2132 HOH HOH . F 5 HOH B 133 2133 2133 HOH HOH . F 5 HOH B 134 2134 2134 HOH HOH . F 5 HOH B 135 2135 2135 HOH HOH . F 5 HOH B 136 2136 2136 HOH HOH . F 5 HOH B 137 2137 2137 HOH HOH . F 5 HOH B 138 2138 2138 HOH HOH . F 5 HOH B 139 2139 2139 HOH HOH . F 5 HOH B 140 2140 2140 HOH HOH . F 5 HOH B 141 2141 2141 HOH HOH . F 5 HOH B 142 2142 2142 HOH HOH . F 5 HOH B 143 2143 2143 HOH HOH . F 5 HOH B 144 2144 2144 HOH HOH . F 5 HOH B 145 2145 2145 HOH HOH . F 5 HOH B 146 2146 2146 HOH HOH . F 5 HOH B 147 2147 2147 HOH HOH . F 5 HOH B 148 2148 2148 HOH HOH . F 5 HOH B 149 2149 2149 HOH HOH . F 5 HOH B 150 2150 2150 HOH HOH . F 5 HOH B 151 2151 2151 HOH HOH . F 5 HOH B 152 2152 2152 HOH HOH . F 5 HOH B 153 2153 2153 HOH HOH . F 5 HOH B 154 2154 2154 HOH HOH . F 5 HOH B 155 2155 2155 HOH HOH . F 5 HOH B 156 2156 2156 HOH HOH . F 5 HOH B 157 2157 2157 HOH HOH . F 5 HOH B 158 2158 2158 HOH HOH . F 5 HOH B 159 2159 2159 HOH HOH . F 5 HOH B 160 2160 2160 HOH HOH . F 5 HOH B 161 2161 2161 HOH HOH . F 5 HOH B 162 2162 2162 HOH HOH . F 5 HOH B 163 2163 2163 HOH HOH . F 5 HOH B 164 2164 2164 HOH HOH . F 5 HOH B 165 2165 2165 HOH HOH . F 5 HOH B 166 2166 2166 HOH HOH . F 5 HOH B 167 2167 2167 HOH HOH . F 5 HOH B 168 2168 2168 HOH HOH . F 5 HOH B 169 2169 2169 HOH HOH . F 5 HOH B 170 2170 2170 HOH HOH . F 5 HOH B 171 2171 2171 HOH HOH . F 5 HOH B 172 2172 2172 HOH HOH . F 5 HOH B 173 2173 2173 HOH HOH . F 5 HOH B 174 2174 2174 HOH HOH . F 5 HOH B 175 2175 2175 HOH HOH . F 5 HOH B 176 2176 2176 HOH HOH . F 5 HOH B 177 2177 2177 HOH HOH . F 5 HOH B 178 2178 2178 HOH HOH . G 5 HOH I 1 2001 2001 HOH HOH . G 5 HOH I 2 2002 2002 HOH HOH . G 5 HOH I 3 2003 2003 HOH HOH . G 5 HOH I 4 2004 2004 HOH HOH . G 5 HOH I 5 2005 2005 HOH HOH . G 5 HOH I 6 2006 2006 HOH HOH . G 5 HOH I 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 166 . . . D 4 8.122 21.991 51.548 0.89 45.58 ? C1 166 1248 B 1 HETATM 2 C C2 166 . . . D 4 9.038 23.218 51.233 0.89 41.52 ? C2 166 1248 B 1 HETATM 3 C C3 166 . . . D 4 10.135 22.946 50.244 0.89 38.12 ? C3 166 1248 B 1 HETATM 4 C C4 166 . . . D 4 9.661 22.96 48.805 0.89 33.95 ? C4 166 1248 B 1 HETATM 5 C C5 166 . . . D 4 10.735 22.468 47.805 0.89 32.81 ? C5 166 1248 B 1 HETATM 6 N N6 166 . . . D 4 11.372 21.306 47.942 0.89 29 ? N6 166 1248 B 1 HETATM 7 N N7 166 . . . D 4 11.024 23.171 46.713 0.89 29.93 ? N7 166 1248 B 1 HETATM 8 O O8 166 . . . D 4 8.689 23.496 54.281 0.89 42.5 ? O8 166 1248 B 1 HETATM 9 O O9 166 . . . D 4 5.169 22.91 55.094 0.89 53.92 ? O9 166 1248 B 1 HETATM 10 C C10 166 . . . D 4 5.767 21.832 52.929 0.89 53.32 ? C10 166 1248 B 1 HETATM 11 C C11 166 . . . D 4 3.685 20.717 52.863 0.89 57.62 ? C11 166 1248 B 1 HETATM 12 C C12 166 . . . D 4 4.807 20.939 52.086 0.89 56.28 ? C12 166 1248 B 1 HETATM 13 C C13 166 . . . D 4 5.27 21.667 54.398 0.89 54.19 ? C13 166 1248 B 1 HETATM 14 C C14 166 . . . D 4 3.854 21.107 54.307 0.89 56.73 ? C14 166 1248 B 1 HETATM 15 C C36 166 . . . D 4 4.775 20.507 50.743 0.89 58.37 ? C36 166 1248 B 1 HETATM 16 C C37 166 . . . D 4 3.585 19.91 50.241 0.89 60.15 ? C37 166 1248 B 1 HETATM 17 C C38 166 . . . D 4 2.47 19.785 51.077 0.89 59.53 ? C38 166 1248 B 1 HETATM 18 C C39 166 . . . D 4 2.509 20.194 52.381 0.89 58.84 ? C39 166 1248 B 1 HETATM 19 C C43 166 . . . D 4 3.401 19.348 48.833 0.89 61.81 ? C43 166 1248 B 1 HETATM 20 C C44 166 . . . D 4 2.169 19.504 48.173 0.89 62.71 ? C44 166 1248 B 1 HETATM 21 C C45 166 . . . D 4 1.929 19.014 46.898 0.89 61.37 ? C45 166 1248 B 1 HETATM 22 C C6 166 . . . D 4 2.929 18.35 46.232 0.89 61.56 ? C6 166 1248 B 1 HETATM 23 C C7 166 . . . D 4 4.159 18.164 46.851 0.89 61.95 ? C7 166 1248 B 1 HETATM 24 C C8 166 . . . D 4 4.395 18.661 48.14 0.89 62.27 ? C8 166 1248 B 1 HETATM 25 O O54 166 . . . D 4 2.684 17.895 44.958 0.89 61.63 ? O54 166 1248 B 1 HETATM 26 C C16 166 . . . D 4 7.339 22.069 52.888 0.89 47.66 ? C16 166 1248 B 1 HETATM 27 C C15 166 . . . D 4 7.695 23.443 53.605 0.89 45.72 ? C15 166 1248 B 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 27 #