data_1QJM # _model_server_result.job_id c5ZUanwhEkZLbCrQJo0D-g _model_server_result.datetime_utc '2024-12-27 02:08:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":690}' # _entry.id 1QJM # _exptl.entry_id 1QJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.36 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SAMARIUM (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QJM _cell.length_a 80.492 _cell.length_b 103.191 _cell.length_c 113.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 36 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 115 A CYS 115 1_555 A SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 157 A CYS 157 1_555 A SG CYS 173 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf5 A SG CYS 160 A CYS 160 1_555 A SG CYS 183 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 A SG CYS 170 A CYS 170 1_555 A SG CYS 181 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf7 A SG CYS 231 A CYS 231 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 A SG CYS 348 A CYS 348 1_555 A SG CYS 380 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? disulf ? disulf9 A SG CYS 358 A CYS 358 1_555 A SG CYS 371 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf10 A SG CYS 405 A CYS 405 1_555 A SG CYS 684 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf11 A SG CYS 425 A CYS 425 1_555 A SG CYS 647 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf12 A SG CYS 457 A CYS 457 1_555 A SG CYS 532 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf13 A SG CYS 481 A CYS 481 1_555 A SG CYS 675 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf14 A SG CYS 491 A CYS 491 1_555 A SG CYS 505 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf15 A SG CYS 502 A CYS 502 1_555 A SG CYS 515 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf16 A SG CYS 573 A CYS 573 1_555 A SG CYS 587 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf17 A SG CYS 625 A CYS 625 1_555 A SG CYS 630 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OD1 ASP 60 A ASP 60 1_555 B SM SM . A SM 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc2 A OH TYR 92 A TYR 92 1_555 B SM SM . A SM 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc3 A OH TYR 192 A TYR 192 1_555 B SM SM . A SM 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc4 A NE2 HIS 253 A HIS 253 1_555 B SM SM . A SM 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc5 A OH TYR 433 A TYR 433 1_555 C SM SM . A SM 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc6 A NH2 ARG 463 A ARG 463 1_555 C SM SM . A SM 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc7 A OH TYR 526 A TYR 526 1_555 C SM SM . A SM 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc8 A NE2 HIS 595 A HIS 595 1_555 C SM SM . A SM 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc9 B SM SM . A SM 690 1_555 D O1 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc10 B SM SM . A SM 690 1_555 D O2 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc11 C SM SM . A SM 691 1_555 E O1 CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.071 ? metalc ? metalc12 C SM SM . A SM 691 1_555 E O2 CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc13 C SM SM . A SM 691 1_555 E O3 CO3 . A CO3 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.133 ? # _chem_comp.formula 'Sm 3' _chem_comp.formula_weight 150.36 _chem_comp.id SM _chem_comp.mon_nstd_flag . _chem_comp.name 'SAMARIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QJM _atom_sites.fract_transf_matrix[1][1] 0.012423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SM A 1 690 690 SM SM . C 2 SM A 1 691 691 SM SM . D 3 CO3 A 1 692 692 CO3 CO3 . E 3 CO3 A 1 693 693 CO3 CO3 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol SM _atom_site.label_atom_id SM _atom_site.label_comp_id SM _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.263 _atom_site.Cartn_y 32.187 _atom_site.Cartn_z 41.038 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id SM _atom_site.auth_comp_id SM _atom_site.auth_seq_id 690 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #