data_1QLF # _model_server_result.job_id sL9NZtjCm6o91zzHgQMx1A _model_server_result.datetime_utc '2024-12-27 00:40:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qlf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":100}' # _entry.id 1QLF # _exptl.entry_id 1QLF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.57 _cell.angle_gamma 90 _cell.entry_id 1QLF _cell.length_a 61.073 _cell.length_b 58.272 _cell.length_c 77.146 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QLF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 C OG SER 4 C SER 4 1_555 G C1 NAG . C NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 1QLF _atom_sites.fract_transf_matrix[1][1] 0.016374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005501 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL A 1 301 200 GOL GOL . E 5 SO4 A 1 302 300 SO4 SO4 . F 4 GOL B 1 100 100 GOL GOL . G 6 NAG C 1 400 400 NAG NAG . H 7 HOH A 1 401 2032 HOH HOH . H 7 HOH A 2 402 2019 HOH HOH . H 7 HOH A 3 403 2069 HOH HOH . H 7 HOH A 4 404 2080 HOH HOH . H 7 HOH A 5 405 2012 HOH HOH . H 7 HOH A 6 406 2051 HOH HOH . H 7 HOH A 7 407 2031 HOH HOH . H 7 HOH A 8 408 2056 HOH HOH . H 7 HOH A 9 409 2006 HOH HOH . H 7 HOH A 10 410 2049 HOH HOH . H 7 HOH A 11 411 2075 HOH HOH . H 7 HOH A 12 412 2016 HOH HOH . H 7 HOH A 13 413 2079 HOH HOH . H 7 HOH A 14 414 2018 HOH HOH . H 7 HOH A 15 415 2001 HOH HOH . H 7 HOH A 16 416 2022 HOH HOH . H 7 HOH A 17 417 2014 HOH HOH . H 7 HOH A 18 418 2008 HOH HOH . H 7 HOH A 19 419 2068 HOH HOH . H 7 HOH A 20 420 2073 HOH HOH . H 7 HOH A 21 421 2059 HOH HOH . H 7 HOH A 22 422 2072 HOH HOH . H 7 HOH A 23 423 2034 HOH HOH . H 7 HOH A 24 424 2039 HOH HOH . H 7 HOH A 25 425 2003 HOH HOH . H 7 HOH A 26 426 2002 HOH HOH . H 7 HOH A 27 427 2011 HOH HOH . H 7 HOH A 28 428 2062 HOH HOH . H 7 HOH A 29 429 2074 HOH HOH . H 7 HOH A 30 430 2065 HOH HOH . H 7 HOH A 31 431 2007 HOH HOH . H 7 HOH A 32 432 2076 HOH HOH . H 7 HOH A 33 433 2035 HOH HOH . H 7 HOH A 34 434 2048 HOH HOH . H 7 HOH A 35 435 2038 HOH HOH . H 7 HOH A 36 436 2044 HOH HOH . H 7 HOH A 37 437 2067 HOH HOH . H 7 HOH A 38 438 2028 HOH HOH . H 7 HOH A 39 439 2021 HOH HOH . H 7 HOH A 40 440 2013 HOH HOH . H 7 HOH A 41 441 2071 HOH HOH . H 7 HOH A 42 442 2026 HOH HOH . H 7 HOH A 43 443 2063 HOH HOH . H 7 HOH A 44 444 2057 HOH HOH . H 7 HOH A 45 445 2058 HOH HOH . H 7 HOH A 46 446 2009 HOH HOH . H 7 HOH A 47 447 2037 HOH HOH . H 7 HOH A 48 448 2023 HOH HOH . H 7 HOH A 49 449 2002 HOH HOH . H 7 HOH A 50 450 2030 HOH HOH . H 7 HOH A 51 451 2004 HOH HOH . H 7 HOH A 52 452 2010 HOH HOH . H 7 HOH A 53 453 2070 HOH HOH . H 7 HOH A 54 454 2064 HOH HOH . H 7 HOH A 55 455 2077 HOH HOH . H 7 HOH A 56 456 2027 HOH HOH . H 7 HOH A 57 457 2020 HOH HOH . H 7 HOH A 58 458 2061 HOH HOH . H 7 HOH A 59 459 2052 HOH HOH . H 7 HOH A 60 460 2046 HOH HOH . H 7 HOH A 61 461 2029 HOH HOH . H 7 HOH A 62 462 2045 HOH HOH . H 7 HOH A 63 463 2055 HOH HOH . H 7 HOH A 64 464 2024 HOH HOH . H 7 HOH A 65 465 2042 HOH HOH . H 7 HOH A 66 466 2025 HOH HOH . H 7 HOH A 67 467 2054 HOH HOH . H 7 HOH A 68 468 2003 HOH HOH . H 7 HOH A 69 469 2050 HOH HOH . H 7 HOH A 70 470 2040 HOH HOH . H 7 HOH A 71 471 2066 HOH HOH . H 7 HOH A 72 472 2041 HOH HOH . H 7 HOH A 73 473 2060 HOH HOH . H 7 HOH A 74 474 2033 HOH HOH . H 7 HOH A 75 475 2036 HOH HOH . H 7 HOH A 76 476 2078 HOH HOH . H 7 HOH A 77 477 2017 HOH HOH . H 7 HOH A 78 478 2053 HOH HOH . H 7 HOH A 79 479 2005 HOH HOH . H 7 HOH A 80 480 2012 HOH HOH . H 7 HOH A 81 481 2047 HOH HOH . H 7 HOH A 82 482 2043 HOH HOH . H 7 HOH A 83 483 2015 HOH HOH . H 7 HOH A 84 484 2030 HOH HOH . H 7 HOH A 85 485 2013 HOH HOH . I 7 HOH B 1 2001 2001 HOH HOH . I 7 HOH B 2 2002 2022 HOH HOH . I 7 HOH B 3 2003 2058 HOH HOH . I 7 HOH B 4 2004 2035 HOH HOH . I 7 HOH B 5 2005 2040 HOH HOH . I 7 HOH B 6 2006 2018 HOH HOH . I 7 HOH B 7 2007 2067 HOH HOH . I 7 HOH B 8 2008 2075 HOH HOH . I 7 HOH B 9 2009 2045 HOH HOH . I 7 HOH B 10 2010 2047 HOH HOH . I 7 HOH B 11 2011 2064 HOH HOH . I 7 HOH B 12 2012 2070 HOH HOH . I 7 HOH B 13 2013 2028 HOH HOH . I 7 HOH B 14 2014 2038 HOH HOH . I 7 HOH B 15 2015 2052 HOH HOH . I 7 HOH B 16 2016 2006 HOH HOH . I 7 HOH B 17 2017 2042 HOH HOH . I 7 HOH B 18 2018 2039 HOH HOH . I 7 HOH B 19 2019 2059 HOH HOH . I 7 HOH B 20 2020 2043 HOH HOH . I 7 HOH B 21 2021 2066 HOH HOH . I 7 HOH B 22 2022 2069 HOH HOH . I 7 HOH B 23 2023 2051 HOH HOH . I 7 HOH B 24 2024 2057 HOH HOH . I 7 HOH B 25 2025 2062 HOH HOH . I 7 HOH B 26 2026 2068 HOH HOH . I 7 HOH B 27 2027 2027 HOH HOH . I 7 HOH B 28 2028 2074 HOH HOH . I 7 HOH B 29 2029 2008 HOH HOH . I 7 HOH B 30 2030 2016 HOH HOH . I 7 HOH B 31 2031 2054 HOH HOH . I 7 HOH B 32 2032 2071 HOH HOH . I 7 HOH B 33 2033 2044 HOH HOH . I 7 HOH B 34 2034 2020 HOH HOH . I 7 HOH B 35 2035 2002 HOH HOH . I 7 HOH B 36 2036 2032 HOH HOH . I 7 HOH B 37 2037 2046 HOH HOH . I 7 HOH B 38 2038 2061 HOH HOH . I 7 HOH B 39 2039 2005 HOH HOH . I 7 HOH B 40 2040 2023 HOH HOH . I 7 HOH B 41 2041 2037 HOH HOH . I 7 HOH B 42 2042 2019 HOH HOH . I 7 HOH B 43 2043 2021 HOH HOH . I 7 HOH B 44 2044 2009 HOH HOH . I 7 HOH B 45 2045 2073 HOH HOH . I 7 HOH B 46 2046 2011 HOH HOH . I 7 HOH B 47 2047 2034 HOH HOH . I 7 HOH B 48 2048 2014 HOH HOH . I 7 HOH B 49 2049 2004 HOH HOH . I 7 HOH B 50 2050 2036 HOH HOH . I 7 HOH B 51 2051 2001 HOH HOH . I 7 HOH B 52 2052 2049 HOH HOH . I 7 HOH B 53 2053 2056 HOH HOH . I 7 HOH B 54 2054 2041 HOH HOH . I 7 HOH B 55 2055 2048 HOH HOH . I 7 HOH B 56 2056 2065 HOH HOH . I 7 HOH B 57 2057 2063 HOH HOH . I 7 HOH B 58 2058 2050 HOH HOH . I 7 HOH B 59 2059 2072 HOH HOH . I 7 HOH B 60 2060 2060 HOH HOH . I 7 HOH B 61 2061 2053 HOH HOH . I 7 HOH B 62 2062 2003 HOH HOH . I 7 HOH B 63 2063 2033 HOH HOH . I 7 HOH B 64 2064 2007 HOH HOH . I 7 HOH B 65 2065 2055 HOH HOH . I 7 HOH B 66 2066 2025 HOH HOH . I 7 HOH B 67 2067 2031 HOH HOH . I 7 HOH B 68 2068 2017 HOH HOH . I 7 HOH B 69 2069 2024 HOH HOH . I 7 HOH B 70 2070 2029 HOH HOH . I 7 HOH B 71 2071 2026 HOH HOH . I 7 HOH B 72 2072 2010 HOH HOH . I 7 HOH B 73 2073 2015 HOH HOH . J 7 HOH C 1 2001 2001 HOH HOH . J 7 HOH C 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 9.797 10.03 38.502 1 47.77 ? C1 GOL 100 B 1 HETATM 2 O O1 GOL . . . F 4 10.657 10.375 39.596 1 47.57 ? O1 GOL 100 B 1 HETATM 3 C C2 GOL . . . F 4 8.883 8.809 38.843 1 47.54 ? C2 GOL 100 B 1 HETATM 4 O O2 GOL . . . F 4 8.391 8.237 37.635 1 48.3 ? O2 GOL 100 B 1 HETATM 5 C C3 GOL . . . F 4 7.7 9.267 39.732 1 46.6 ? C3 GOL 100 B 1 HETATM 6 O O3 GOL . . . F 4 7.011 8.137 40.295 1 46.85 ? O3 GOL 100 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #