data_1QM4 # _model_server_result.job_id EDnttMAysCmN8HxiRi2GfQ _model_server_result.datetime_utc '2024-11-23 20:39:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qm4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 1QM4 # _exptl.entry_id 1QM4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QM4 _cell.length_a 115.2 _cell.length_b 115.2 _cell.length_c 159.98 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QM4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z+3/4 0 1 0 1 0 0 0 0 -1 0 0 119.985 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 180 A ASP 180 1_555 F MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc2 A OG SER 248 A SER 248 1_555 G MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc3 A O GLY 264 A GLY 264 1_555 H K K . A K 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? metalc ? metalc4 C OXT AMB . A AMB 401 1_555 F MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? metalc ? metalc5 D O2 SO4 . A SO4 402 1_555 G MG MG . A MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc6 E O2 SO4 . A SO4 403 1_555 I K K . A K 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.093 ? metalc ? metalc7 H K K . A K 406 1_555 B O ARG 265 B ARG 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.322 ? metalc ? metalc8 J O2 SO4 . B SO4 401 1_555 K K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.206 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QM4 _atom_sites.fract_transf_matrix[1][1] 0.00868 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMB A 1 401 397 AMB AMB . D 3 SO4 A 1 402 399 SO4 SO4 . E 3 SO4 A 1 403 400 SO4 SO4 . F 4 MG A 1 404 401 MG MG . G 4 MG A 1 405 402 MG MG . H 5 K A 1 406 403 K K . I 5 K A 1 407 405 K K . J 3 SO4 B 1 401 398 SO4 SO4 . K 5 K B 1 402 404 K K . L 6 HOH A 1 501 2099 HOH HOH . L 6 HOH A 2 502 2063 HOH HOH . L 6 HOH A 3 503 2068 HOH HOH . L 6 HOH A 4 504 2032 HOH HOH . L 6 HOH A 5 505 2071 HOH HOH . L 6 HOH A 6 506 2059 HOH HOH . L 6 HOH A 7 507 2039 HOH HOH . L 6 HOH A 8 508 2045 HOH HOH . L 6 HOH A 9 509 2081 HOH HOH . L 6 HOH A 10 510 2102 HOH HOH . L 6 HOH A 11 511 2075 HOH HOH . L 6 HOH A 12 512 2006 HOH HOH . L 6 HOH A 13 513 2089 HOH HOH . L 6 HOH A 14 514 2054 HOH HOH . L 6 HOH A 15 515 2095 HOH HOH . L 6 HOH A 16 516 2012 HOH HOH . L 6 HOH A 17 517 2004 HOH HOH . L 6 HOH A 18 518 2073 HOH HOH . L 6 HOH A 19 519 2003 HOH HOH . L 6 HOH A 20 520 2048 HOH HOH . L 6 HOH A 21 521 2038 HOH HOH . L 6 HOH A 22 522 2026 HOH HOH . L 6 HOH A 23 523 2028 HOH HOH . L 6 HOH A 24 524 2007 HOH HOH . L 6 HOH A 25 525 2074 HOH HOH . L 6 HOH A 26 526 2017 HOH HOH . L 6 HOH A 27 527 2053 HOH HOH . L 6 HOH A 28 528 2058 HOH HOH . L 6 HOH A 29 529 2022 HOH HOH . L 6 HOH A 30 530 2057 HOH HOH . L 6 HOH A 31 531 2070 HOH HOH . L 6 HOH A 32 532 2005 HOH HOH . L 6 HOH A 33 533 2024 HOH HOH . L 6 HOH A 34 534 2035 HOH HOH . L 6 HOH A 35 535 2094 HOH HOH . L 6 HOH A 36 536 2091 HOH HOH . L 6 HOH A 37 537 2103 HOH HOH . L 6 HOH A 38 538 2100 HOH HOH . L 6 HOH A 39 539 2069 HOH HOH . L 6 HOH A 40 540 2093 HOH HOH . L 6 HOH A 41 541 2002 HOH HOH . L 6 HOH A 42 542 2082 HOH HOH . L 6 HOH A 43 543 2056 HOH HOH . L 6 HOH A 44 544 2085 HOH HOH . L 6 HOH A 45 545 2067 HOH HOH . L 6 HOH A 46 546 2104 HOH HOH . L 6 HOH A 47 547 2078 HOH HOH . L 6 HOH A 48 548 2047 HOH HOH . L 6 HOH A 49 549 2019 HOH HOH . L 6 HOH A 50 550 2020 HOH HOH . L 6 HOH A 51 551 2013 HOH HOH . L 6 HOH A 52 552 2062 HOH HOH . L 6 HOH A 53 553 2079 HOH HOH . L 6 HOH A 54 554 2034 HOH HOH . L 6 HOH A 55 555 2043 HOH HOH . L 6 HOH A 56 556 2064 HOH HOH . L 6 HOH A 57 557 2046 HOH HOH . L 6 HOH A 58 558 2031 HOH HOH . L 6 HOH A 59 559 2060 HOH HOH . L 6 HOH A 60 560 2088 HOH HOH . L 6 HOH A 61 561 2084 HOH HOH . L 6 HOH A 62 562 2061 HOH HOH . L 6 HOH A 63 563 2051 HOH HOH . L 6 HOH A 64 564 2076 HOH HOH . L 6 HOH A 65 565 2066 HOH HOH . L 6 HOH A 66 566 2052 HOH HOH . L 6 HOH A 67 567 2080 HOH HOH . L 6 HOH A 68 568 2001 HOH HOH . L 6 HOH A 69 569 2036 HOH HOH . L 6 HOH A 70 570 2040 HOH HOH . L 6 HOH A 71 571 2044 HOH HOH . L 6 HOH A 72 572 2087 HOH HOH . L 6 HOH A 73 573 2065 HOH HOH . L 6 HOH A 74 574 2077 HOH HOH . L 6 HOH A 75 575 2049 HOH HOH . L 6 HOH A 76 576 2086 HOH HOH . L 6 HOH A 77 577 2037 HOH HOH . L 6 HOH A 78 578 2090 HOH HOH . L 6 HOH A 79 579 2101 HOH HOH . L 6 HOH A 80 580 2096 HOH HOH . L 6 HOH A 81 581 2083 HOH HOH . L 6 HOH A 82 582 2011 HOH HOH . L 6 HOH A 83 583 2010 HOH HOH . L 6 HOH A 84 584 2033 HOH HOH . L 6 HOH A 85 585 2050 HOH HOH . L 6 HOH A 86 586 2027 HOH HOH . L 6 HOH A 87 587 2092 HOH HOH . L 6 HOH A 88 588 2023 HOH HOH . L 6 HOH A 89 589 2042 HOH HOH . L 6 HOH A 90 590 2030 HOH HOH . L 6 HOH A 91 591 2014 HOH HOH . L 6 HOH A 92 592 2016 HOH HOH . L 6 HOH A 93 593 2097 HOH HOH . L 6 HOH A 94 594 2072 HOH HOH . L 6 HOH A 95 595 2041 HOH HOH . L 6 HOH A 96 596 2098 HOH HOH . L 6 HOH A 97 597 2021 HOH HOH . L 6 HOH A 98 598 2055 HOH HOH . L 6 HOH A 99 599 2009 HOH HOH . L 6 HOH A 100 600 2015 HOH HOH . L 6 HOH A 101 601 2029 HOH HOH . L 6 HOH A 102 602 2025 HOH HOH . L 6 HOH A 103 603 2008 HOH HOH . L 6 HOH A 104 604 2018 HOH HOH . M 6 HOH B 1 501 2006 HOH HOH . M 6 HOH B 2 502 2067 HOH HOH . M 6 HOH B 3 503 2042 HOH HOH . M 6 HOH B 4 504 2023 HOH HOH . M 6 HOH B 5 505 2084 HOH HOH . M 6 HOH B 6 506 2079 HOH HOH . M 6 HOH B 7 507 2001 HOH HOH . M 6 HOH B 8 508 2025 HOH HOH . M 6 HOH B 9 509 2064 HOH HOH . M 6 HOH B 10 510 2066 HOH HOH . M 6 HOH B 11 511 2005 HOH HOH . M 6 HOH B 12 512 2027 HOH HOH . M 6 HOH B 13 513 2069 HOH HOH . M 6 HOH B 14 514 2051 HOH HOH . M 6 HOH B 15 515 2058 HOH HOH . M 6 HOH B 16 516 2052 HOH HOH . M 6 HOH B 17 517 2033 HOH HOH . M 6 HOH B 18 518 2029 HOH HOH . M 6 HOH B 19 519 2017 HOH HOH . M 6 HOH B 20 520 2075 HOH HOH . M 6 HOH B 21 521 2091 HOH HOH . M 6 HOH B 22 522 2002 HOH HOH . M 6 HOH B 23 523 2012 HOH HOH . M 6 HOH B 24 524 2038 HOH HOH . M 6 HOH B 25 525 2063 HOH HOH . M 6 HOH B 26 526 2014 HOH HOH . M 6 HOH B 27 527 2070 HOH HOH . M 6 HOH B 28 528 2015 HOH HOH . M 6 HOH B 29 529 2090 HOH HOH . M 6 HOH B 30 530 2019 HOH HOH . M 6 HOH B 31 531 2046 HOH HOH . M 6 HOH B 32 532 2049 HOH HOH . M 6 HOH B 33 533 2089 HOH HOH . M 6 HOH B 34 534 2044 HOH HOH . M 6 HOH B 35 535 2068 HOH HOH . M 6 HOH B 36 536 2057 HOH HOH . M 6 HOH B 37 537 2003 HOH HOH . M 6 HOH B 38 538 2047 HOH HOH . M 6 HOH B 39 539 2009 HOH HOH . M 6 HOH B 40 540 2086 HOH HOH . M 6 HOH B 41 541 2032 HOH HOH . M 6 HOH B 42 542 2076 HOH HOH . M 6 HOH B 43 543 2061 HOH HOH . M 6 HOH B 44 544 2092 HOH HOH . M 6 HOH B 45 545 2065 HOH HOH . M 6 HOH B 46 546 2043 HOH HOH . M 6 HOH B 47 547 2080 HOH HOH . M 6 HOH B 48 548 2016 HOH HOH . M 6 HOH B 49 549 2062 HOH HOH . M 6 HOH B 50 550 2004 HOH HOH . M 6 HOH B 51 551 2040 HOH HOH . M 6 HOH B 52 552 2078 HOH HOH . M 6 HOH B 53 553 2045 HOH HOH . M 6 HOH B 54 554 2026 HOH HOH . M 6 HOH B 55 555 2053 HOH HOH . M 6 HOH B 56 556 2071 HOH HOH . M 6 HOH B 57 557 2048 HOH HOH . M 6 HOH B 58 558 2041 HOH HOH . M 6 HOH B 59 559 2087 HOH HOH . M 6 HOH B 60 560 2085 HOH HOH . M 6 HOH B 61 561 2039 HOH HOH . M 6 HOH B 62 562 2072 HOH HOH . M 6 HOH B 63 563 2059 HOH HOH . M 6 HOH B 64 564 2056 HOH HOH . M 6 HOH B 65 565 2020 HOH HOH . M 6 HOH B 66 566 2083 HOH HOH . M 6 HOH B 67 567 2010 HOH HOH . M 6 HOH B 68 568 2077 HOH HOH . M 6 HOH B 69 569 2050 HOH HOH . M 6 HOH B 70 570 2074 HOH HOH . M 6 HOH B 71 571 2035 HOH HOH . M 6 HOH B 72 572 2011 HOH HOH . M 6 HOH B 73 573 2081 HOH HOH . M 6 HOH B 74 574 2034 HOH HOH . M 6 HOH B 75 575 2037 HOH HOH . M 6 HOH B 76 576 2036 HOH HOH . M 6 HOH B 77 577 2088 HOH HOH . M 6 HOH B 78 578 2082 HOH HOH . M 6 HOH B 79 579 2073 HOH HOH . M 6 HOH B 80 580 2054 HOH HOH . M 6 HOH B 81 581 2013 HOH HOH . M 6 HOH B 82 582 2030 HOH HOH . M 6 HOH B 83 583 2001 HOH HOH . M 6 HOH B 84 584 2028 HOH HOH . M 6 HOH B 85 585 2031 HOH HOH . M 6 HOH B 86 586 2021 HOH HOH . M 6 HOH B 87 587 2022 HOH HOH . M 6 HOH B 88 588 2008 HOH HOH . M 6 HOH B 89 589 2060 HOH HOH . M 6 HOH B 90 590 2055 HOH HOH . M 6 HOH B 91 591 2007 HOH HOH . M 6 HOH B 92 592 2024 HOH HOH . M 6 HOH B 93 593 2018 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 6.95 _atom_site.Cartn_y 34.036 _atom_site.Cartn_z 52.924 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #