data_1QMF # _model_server_result.job_id wQVq1_QYYfGN-3hIDfQNtg _model_server_result.datetime_utc '2024-10-14 07:25:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qmf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 1QMF # _exptl.entry_id 1QMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.376 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[CARBOXY-(2-FURAN-2-YL-2-METHOXYIMINO-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QMF _cell.length_a 129.91 _cell.length_b 129.91 _cell.length_c 139.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 289 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 337 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C8 _struct_conn.ptnr2_label_comp_id CES _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CES _struct_conn.ptnr2_auth_seq_id 800 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.411 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H17 N3 O7 S' _chem_comp.formula_weight 383.376 _chem_comp.id CES _chem_comp.mon_nstd_flag . _chem_comp.name '2-[CARBOXY-(2-FURAN-2-YL-2-METHOXYIMINO-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CEFUROXIME (INHIBITION FORM)' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 O15 CES sing 70 n y C14 C19 CES doub 71 n y C14 C13 CES sing 72 n n O15 C16 CES sing 73 n y C16 C17 CES doub 74 n y C16 H16 CES sing 75 n n C17 C19 CES sing 76 n y C17 H17 CES sing 77 n n C19 H19 CES sing 78 n n C18 O17 CES sing 79 n n C18 H183 CES sing 80 n n C18 H182 CES sing 81 n n C18 H181 CES sing 82 n n O17 N16 CES sing 83 n n N16 C13 CES doub 84 e n C13 C11 CES sing 85 n n C4' O4A CES sing 86 n n C4' O4B CES doub 87 n n C4' C4 CES sing 88 n n O4A H4O CES sing 89 n n O9 C8 CES doub 90 n n C8 C7 CES sing 91 n n C8 O9A CES sing 92 n n C3' C3 CES sing 93 n n C3' "H3'3" CES sing 94 n n C3' "H3'2" CES sing 95 n n C3' "H3'1" CES sing 96 n n C3 C2 CES sing 97 n n C3 C4 CES doub 98 n n C2 S1 CES sing 99 n n C2 H21 CES sing 100 n n C2 H22 CES sing 101 n n S1 C6 CES sing 102 n n C6 N5 CES sing 103 n n C6 C7 CES sing 104 n n C6 H6 CES sing 105 n n N5 C4 CES sing 106 n n N5 HN5 CES sing 107 n n C7 N10 CES sing 108 n n C7 H7 CES sing 109 n n N10 C11 CES sing 110 n n N10 H10 CES sing 111 n n C11 O12 CES doub 112 n n O9A HO9 CES sing 113 n n # _atom_sites.entry_id 1QMF _atom_sites.fract_transf_matrix[1][1] 0.007698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CES A 1 800 800 CES CES . C 3 KEF A 1 900 900 KEF KEF . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 CES . . . B 2 118.545 62.151 69.575 1 84.9 ? C14 CES 800 A 1 HETATM 2 O O15 CES . . . B 2 119.803 62.26 68.903 1 92.84 ? O15 CES 800 A 1 HETATM 3 C C16 CES . . . B 2 119.352 62.435 67.611 1 92.91 ? C16 CES 800 A 1 HETATM 4 C C17 CES . . . B 2 117.993 62.456 67.335 1 87.21 ? C17 CES 800 A 1 HETATM 5 C C19 CES . . . B 2 117.583 62.26 68.582 1 86.95 ? C19 CES 800 A 1 HETATM 6 C C18 CES . . . B 2 120.413 63.272 73.626 1 42.35 ? C18 CES 800 A 1 HETATM 7 O O17 CES . . . B 2 119.564 62.262 73.094 1 55.68 ? O17 CES 800 A 1 HETATM 8 N N16 CES . . . B 2 119.426 62.559 71.696 1 65.65 ? N16 CES 800 A 1 HETATM 9 C C13 CES . . . B 2 118.384 61.978 71.056 1 76.42 ? C13 CES 800 A 1 HETATM 10 C C4' CES . . . B 2 114.228 63.913 77.176 1 62.65 ? C4' CES 800 A 1 HETATM 11 O O4A CES . . . B 2 113.06 63.502 77.349 1 67.33 ? O4A CES 800 A 1 HETATM 12 O O4B CES . . . B 2 114.53 65.132 77.171 1 57.58 ? O4B CES 800 A 1 HETATM 13 O O9 CES . . . B 2 114.957 63.079 73.381 1 57.88 ? O9 CES 800 A 1 HETATM 14 C C8 CES . . . B 2 114.806 61.859 73.424 1 58.62 ? C8 CES 800 A 1 HETATM 15 C C3' CES . . . B 2 116.901 63.677 78.721 1 73.81 ? C3' CES 800 A 1 HETATM 16 C C3 CES . . . B 2 116.654 62.77 77.751 1 72.08 ? C3 CES 800 A 1 HETATM 17 C C2 CES . . . B 2 117.583 61.75 77.46 1 69.48 ? C2 CES 800 A 1 HETATM 18 S S1 CES . . . B 2 117.874 61.306 75.767 1 67.73 ? S1 CES 800 A 1 HETATM 19 C C6 CES . . . B 2 116.164 60.948 75.364 1 63.68 ? C6 CES 800 A 1 HETATM 20 N N5 CES . . . B 2 115.15 61.826 76.057 1 63.06 ? N5 CES 800 A 1 HETATM 21 C C4 CES . . . B 2 115.376 62.832 76.972 1 66.66 ? C4 CES 800 A 1 HETATM 22 C C7 CES . . . B 2 115.961 60.932 73.764 1 65.69 ? C7 CES 800 A 1 HETATM 23 N N10 CES . . . B 2 117.226 61.268 73.014 1 69.39 ? N10 CES 800 A 1 HETATM 24 C C11 CES . . . B 2 117.239 61.302 71.656 1 76.36 ? C11 CES 800 A 1 HETATM 25 O O12 CES . . . B 2 116.316 60.795 70.998 1 82.72 ? O12 CES 800 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #