data_1QPF # _model_server_result.job_id 8uIkOhlqJEviuLQgDGf1hA _model_server_result.datetime_utc '2024-11-28 09:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":108}' # _entry.id 1QPF # _exptl.entry_id 1QPF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 935.193 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description C32-O-(1-ETHYL-INDOL-5-YL)ASCOMYCIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1QPF _cell.length_a 74.26 _cell.length_b 74.26 _cell.length_c 236.45 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PQS dimeric 2 software_defined_assembly 3 PQS dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,C,D,F 2 1,2 B,E,G 2 3,4 A,C,D,F 3 1,2 B,E,G 4 1,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 37.13 64.311046 197.041667 3 'crystal symmetry operation' 5_564 y,-x+y+1,z-1/6 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 -37.13 64.311046 -39.408333 4 'crystal symmetry operation' 8_566 x-y,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 -37.13 64.311046 236.45 5 'crystal symmetry operation' 12_566 x,x-y+1,-z+7/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -37.13 64.311046 275.858333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C53 H78 N2 O12' _chem_comp.formula_weight 935.193 _chem_comp.id 858 _chem_comp.mon_nstd_flag . _chem_comp.name C32-O-(1-ETHYL-INDOL-5-YL)ASCOMYCIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms L-709,858 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 858 sing 1 n n C1 O1 858 sing 2 n n C1 O2 858 doub 3 n n C2 C3 858 sing 4 n n C2 N7 858 sing 5 n n C2 H2 858 sing 6 n n C3 C4 858 sing 7 n n C3 H31A 858 sing 8 n n C3 H32A 858 sing 9 n n C4 C5 858 sing 10 n n C4 H41 858 sing 11 n n C4 H42 858 sing 12 n n C5 C6 858 sing 13 n n C5 H51 858 sing 14 n n C5 H52 858 sing 15 n n C6 N7 858 sing 16 n n C6 H61 858 sing 17 n n C6 H62A 858 sing 18 n n C8 C9 858 sing 19 n n C8 N7 858 sing 20 n n C8 O3 858 doub 21 n n C9 C10 858 sing 22 n n C9 O4 858 doub 23 n n C10 C11 858 sing 24 n n C10 O5 858 sing 25 n n C10 O6 858 sing 26 n n C11 C12 858 sing 27 n n C11 C35 858 sing 28 n n C11 H11 858 sing 29 n n C12 C13 858 sing 30 n n C12 H121 858 sing 31 n n C12 H122 858 sing 32 n n C13 C14 858 sing 33 n n C13 O7 858 sing 34 n n C13 H13 858 sing 35 n n C14 C15 858 sing 36 n n C14 O5 858 sing 37 n n C14 H14 858 sing 38 n n C15 C16 858 sing 39 n n C15 O8 858 sing 40 n n C15 H15 858 sing 41 n n C16 C17 858 sing 42 n n C16 H161 858 sing 43 n n C16 H162 858 sing 44 n n C17 C18 858 sing 45 n n C17 C36 858 sing 46 n n C17 H17 858 sing 47 n n C18 C19 858 sing 48 n n C18 H18 858 sing 49 n n C18 H182 858 sing 50 n n C19 C20 858 doub 51 e n C19 C37 858 sing 52 n n C20 C21 858 sing 53 n n C20 H20 858 sing 54 n n C21 C22 858 sing 55 n n C21 C38 858 sing 56 n n C21 H21 858 sing 57 n n C22 C23 858 sing 58 n n C22 O9 858 doub 59 n n C23 C24 858 sing 60 n n C23 H231 858 sing 61 n n C23 H232 858 sing 62 n n C24 C25 858 sing 63 n n C24 O10 858 sing 64 n n C24 H24 858 sing 65 n n C25 C26 858 sing 66 n n C25 C41 858 sing 67 n n C25 H25 858 sing 68 n n C26 C27 858 sing 69 n n C26 O1 858 sing 70 n n C26 H26 858 sing 71 n n C27 C28 858 doub 72 e n C27 C42 858 sing 73 n n C28 C29 858 sing 74 n n C28 H28 858 sing 75 n n C29 C30 858 sing 76 n n C29 C34 858 sing 77 n n C29 H29 858 sing 78 n n C30 C31 858 sing 79 n n C30 H301 858 sing 80 n n C30 H302 858 sing 81 n n C31 C32 858 sing 82 n n C31 O11 858 sing 83 n n C31 H31 858 sing 84 n n C32 C33 858 sing 85 n n C32 O12 858 sing 86 n n C32 H32 858 sing 87 n n C33 C34 858 sing 88 n n C33 H331 858 sing 89 n n C33 H332 858 sing 90 n n C34 H341 858 sing 91 n n C34 H342 858 sing 92 n n C35 H351 858 sing 93 n n C35 H352 858 sing 94 n n C35 H353 858 sing 95 n n C36 H361 858 sing 96 n n C36 H362 858 sing 97 n n C36 H363 858 sing 98 n n C37 H371 858 sing 99 n n C37 H372 858 sing 100 n n C37 H373 858 sing 101 n n C38 C39 858 sing 102 n n C38 H381 858 sing 103 n n C38 H382 858 sing 104 n n C39 H391 858 sing 105 n n C39 H392 858 sing 106 n n C39 H393 858 sing 107 n n C41 H411 858 sing 108 n n C41 H412 858 sing 109 n n C41 H413 858 sing 110 n n C42 H421 858 sing 111 n n C42 H422 858 sing 112 n n C42 H423 858 sing 113 n n C43 O7 858 sing 114 n n C43 H431 858 sing 115 n n C43 H432 858 sing 116 n n C43 H433 858 sing 117 n n C44 O8 858 sing 118 n n C44 H441 858 sing 119 n n C44 H442 858 sing 120 n n C44 H443 858 sing 121 n n C45 O11 858 sing 122 n n C45 H451 858 sing 123 n n C45 H452 858 sing 124 n n C45 H453 858 sing 125 n n C58 C59 858 doub 126 n y C58 C60 858 sing 127 n y C58 O12 858 sing 128 n n C59 C62 858 sing 129 n y C59 H59 858 sing 130 n n C60 C61 858 doub 131 n y C60 H60 858 sing 132 n n C61 C63 858 sing 133 n y C61 C64 858 sing 134 n y C62 C63 858 doub 135 n y C62 H62 858 sing 136 n n C63 N65 858 sing 137 n y C64 C66 858 doub 138 n y C64 H64 858 sing 139 n n N65 C66 858 sing 140 n y N65 C67 858 sing 141 n n C66 H66 858 sing 142 n n C67 C68 858 sing 143 n n C67 H671 858 sing 144 n n C67 H672 858 sing 145 n n C68 H681 858 sing 146 n n C68 H682 858 sing 147 n n C68 H683 858 sing 148 n n O6 HO6 858 sing 149 n n O10 HO10 858 sing 150 n n # _atom_sites.entry_id 1QPF _atom_sites.fract_transf_matrix[1][1] 0.013466 _atom_sites.fract_transf_matrix[1][2] 0.007775 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 858 A 1 108 108 858 858 . D 3 B7G A 1 109 109 B7G B7G . E 2 858 D 1 308 308 858 858 . F 4 HOH A 1 401 401 HOH HOH . F 4 HOH A 2 402 402 HOH HOH . F 4 HOH A 3 403 403 HOH HOH . F 4 HOH A 4 404 404 HOH HOH . F 4 HOH A 5 410 410 HOH HOH . F 4 HOH A 6 411 411 HOH HOH . F 4 HOH A 7 412 412 HOH HOH . F 4 HOH A 8 413 413 HOH HOH . F 4 HOH A 9 414 414 HOH HOH . F 4 HOH A 10 415 415 HOH HOH . F 4 HOH A 11 416 416 HOH HOH . F 4 HOH A 12 417 417 HOH HOH . F 4 HOH A 13 418 418 HOH HOH . F 4 HOH A 14 421 421 HOH HOH . F 4 HOH A 15 425 425 HOH HOH . F 4 HOH A 16 426 426 HOH HOH . F 4 HOH A 17 428 428 HOH HOH . F 4 HOH A 18 430 430 HOH HOH . F 4 HOH A 19 431 431 HOH HOH . F 4 HOH A 20 432 432 HOH HOH . F 4 HOH A 21 437 437 HOH HOH . F 4 HOH A 22 438 438 HOH HOH . F 4 HOH A 23 439 439 HOH HOH . F 4 HOH A 24 441 441 HOH HOH . F 4 HOH A 25 442 442 HOH HOH . F 4 HOH A 26 445 445 HOH HOH . F 4 HOH A 27 449 449 HOH HOH . F 4 HOH A 28 451 451 HOH HOH . F 4 HOH A 29 452 452 HOH HOH . F 4 HOH A 30 454 454 HOH HOH . F 4 HOH A 31 455 455 HOH HOH . G 4 HOH D 1 405 405 HOH HOH . G 4 HOH D 2 406 406 HOH HOH . G 4 HOH D 3 407 407 HOH HOH . G 4 HOH D 4 408 408 HOH HOH . G 4 HOH D 5 409 409 HOH HOH . G 4 HOH D 6 419 419 HOH HOH . G 4 HOH D 7 420 420 HOH HOH . G 4 HOH D 8 422 422 HOH HOH . G 4 HOH D 9 423 423 HOH HOH . G 4 HOH D 10 424 424 HOH HOH . G 4 HOH D 11 427 427 HOH HOH . G 4 HOH D 12 429 429 HOH HOH . G 4 HOH D 13 433 433 HOH HOH . G 4 HOH D 14 434 434 HOH HOH . G 4 HOH D 15 435 435 HOH HOH . G 4 HOH D 16 436 436 HOH HOH . G 4 HOH D 17 440 440 HOH HOH . G 4 HOH D 18 443 443 HOH HOH . G 4 HOH D 19 444 444 HOH HOH . G 4 HOH D 20 446 446 HOH HOH . G 4 HOH D 21 447 447 HOH HOH . G 4 HOH D 22 448 448 HOH HOH . G 4 HOH D 23 450 450 HOH HOH . G 4 HOH D 24 453 453 HOH HOH . G 4 HOH D 25 456 456 HOH HOH . G 4 HOH D 26 457 457 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 858 . . . C 2 4.035 45.828 107.773 1 12.4 ? C1 858 108 A 1 HETATM 2 C C2 858 . . . C 2 5.021 44.684 107.958 1 12.4 ? C2 858 108 A 1 HETATM 3 C C3 858 . . . C 2 6.297 45.202 108.616 1 12.4 ? C3 858 108 A 1 HETATM 4 C C4 858 . . . C 2 7.088 46.142 107.73 1 12.4 ? C4 858 108 A 1 HETATM 5 C C5 858 . . . C 2 7.455 45.448 106.435 1 12.4 ? C5 858 108 A 1 HETATM 6 C C6 858 . . . C 2 6.209 44.928 105.738 1 12.4 ? C6 858 108 A 1 HETATM 7 C C8 858 . . . C 2 5.235 42.804 106.459 1 12.4 ? C8 858 108 A 1 HETATM 8 C C9 858 . . . C 2 5.662 42.147 105.297 1 12.4 ? C9 858 108 A 1 HETATM 9 C C10 858 . . . C 2 4.894 42.032 103.976 1 12.4 ? C10 858 108 A 1 HETATM 10 C C11 858 . . . C 2 3.358 41.901 104.253 1 12.4 ? C11 858 108 A 1 HETATM 11 C C12 858 . . . C 2 2.589 42.321 103 1 12.4 ? C12 858 108 A 1 HETATM 12 C C13 858 . . . C 2 3.094 43.632 102.402 1 12.4 ? C13 858 108 A 1 HETATM 13 C C14 858 . . . C 2 4.577 43.495 102.074 1 12.4 ? C14 858 108 A 1 HETATM 14 C C15 858 . . . C 2 5.355 44.608 101.373 1 12.4 ? C15 858 108 A 1 HETATM 15 C C16 858 . . . C 2 4.994 45.975 101.958 1 12.4 ? C16 858 108 A 1 HETATM 16 C C17 858 . . . C 2 5.696 47.195 101.36 1 12.4 ? C17 858 108 A 1 HETATM 17 C C18 858 . . . C 2 5.134 47.757 100.047 1 12.4 ? C18 858 108 A 1 HETATM 18 C C19 858 . . . C 2 3.965 48.679 100.356 1 12.4 ? C19 858 108 A 1 HETATM 19 C C20 858 . . . C 2 2.701 48.248 100.316 1 12.4 ? C20 858 108 A 1 HETATM 20 C C21 858 . . . C 2 1.54 49.062 100.839 1 12.4 ? C21 858 108 A 1 HETATM 21 C C22 858 . . . C 2 1.212 48.663 102.278 1 12.4 ? C22 858 108 A 1 HETATM 22 C C23 858 . . . C 2 1.64 49.603 103.393 1 12.4 ? C23 858 108 A 1 HETATM 23 C C24 858 . . . C 2 1.571 48.953 104.779 1 12.4 ? C24 858 108 A 1 HETATM 24 C C25 858 . . . C 2 2.71 47.913 104.978 1 12.4 ? C25 858 108 A 1 HETATM 25 C C26 858 . . . C 2 2.575 47.188 106.341 1 12.4 ? C26 858 108 A 1 HETATM 26 C C27 858 . . . C 2 1.245 46.462 106.438 1 12.4 ? C27 858 108 A 1 HETATM 27 C C28 858 . . . C 2 0.458 46.785 107.465 1 12.4 ? C28 858 108 A 1 HETATM 28 C C29 858 . . . C 2 -0.935 46.289 107.587 1 12.4 ? C29 858 108 A 1 HETATM 29 C C30 858 . . . C 2 -1.479 46.048 108.997 1 12.4 ? C30 858 108 A 1 HETATM 30 C C31 858 . . . C 2 -2.919 45.532 109.042 1 12.4 ? C31 858 108 A 1 HETATM 31 C C32 858 . . . C 2 -3.857 46.491 108.271 1 12.4 ? C32 858 108 A 1 HETATM 32 C C33 858 . . . C 2 -3.301 46.799 106.881 1 12.4 ? C33 858 108 A 1 HETATM 33 C C34 858 . . . C 2 -1.873 47.275 106.901 1 12.4 ? C34 858 108 A 1 HETATM 34 C C35 858 . . . C 2 2.981 40.469 104.613 1 12.4 ? C35 858 108 A 1 HETATM 35 C C36 858 . . . C 2 7.184 46.898 101.195 1 12.4 ? C36 858 108 A 1 HETATM 36 C C37 858 . . . C 2 4.313 50.108 100.771 1 12.4 ? C37 858 108 A 1 HETATM 37 C C38 858 . . . C 2 0.332 48.832 99.926 1 12.4 ? C38 858 108 A 1 HETATM 38 C C39 858 . . . C 2 -0.848 49.741 100.204 1 12.4 ? C39 858 108 A 1 HETATM 39 C C41 858 . . . C 2 4.064 48.595 104.895 1 12.4 ? C41 858 108 A 1 HETATM 40 C C42 858 . . . C 2 0.878 45.378 105.428 1 12.4 ? C42 858 108 A 1 HETATM 41 C C43 858 . . . C 2 1.224 44.658 101.455 1 12.4 ? C43 858 108 A 1 HETATM 42 C C44 858 . . . C 2 5.879 43.433 99.457 1 12.4 ? C44 858 108 A 1 HETATM 43 C C45 858 . . . C 2 -2.832 44.56 111.288 1 12.4 ? C45 858 108 A 1 HETATM 44 C C58 858 . . . C 2 -6.205 46.418 108.511 1 12.4 ? C58 858 108 A 1 HETATM 45 C C59 858 . . . C 2 -6.429 46.449 109.886 1 12.4 ? C59 858 108 A 1 HETATM 46 C C60 858 . . . C 2 -7.166 46.86 107.606 1 12.4 ? C60 858 108 A 1 HETATM 47 C C61 858 . . . C 2 -8.394 47.345 108.079 1 12.4 ? C61 858 108 A 1 HETATM 48 C C62 858 . . . C 2 -7.614 46.921 110.375 1 12.4 ? C62 858 108 A 1 HETATM 49 C C63 858 . . . C 2 -8.577 47.358 109.457 1 12.4 ? C63 858 108 A 1 HETATM 50 C C64 858 . . . C 2 -9.504 47.799 107.41 1 12.4 ? C64 858 108 A 1 HETATM 51 N N65 858 . . . C 2 -9.921 47.857 109.638 1 12.4 ? N65 858 108 A 1 HETATM 52 C C66 858 . . . C 2 -10.557 48.159 108.255 1 12.4 ? C66 858 108 A 1 HETATM 53 C C67 858 . . . C 2 -10.618 48.026 110.946 1 12.4 ? C67 858 108 A 1 HETATM 54 C C68 858 . . . C 2 -10.919 46.698 111.634 1 12.4 ? C68 858 108 A 1 HETATM 55 N N7 858 . . . C 2 5.465 44.099 106.695 1 12.4 ? N7 858 108 A 1 HETATM 56 O O1 858 . . . C 2 3.607 46.207 106.533 1 12.4 ? O1 858 108 A 1 HETATM 57 O O2 858 . . . C 2 3.628 46.448 108.752 1 12.4 ? O2 858 108 A 1 HETATM 58 O O3 858 . . . C 2 4.612 42.125 107.284 1 12.4 ? O3 858 108 A 1 HETATM 59 O O4 858 . . . C 2 6.78 41.622 105.282 1 12.4 ? O4 858 108 A 1 HETATM 60 O O5 858 . . . C 2 5.242 43.217 103.277 1 12.4 ? O5 858 108 A 1 HETATM 61 O O6 858 . . . C 2 5.399 40.978 103.176 1 12.4 ? O6 858 108 A 1 HETATM 62 O O7 858 . . . C 2 2.406 43.906 101.214 1 12.4 ? O7 858 108 A 1 HETATM 63 O O8 858 . . . C 2 5.069 44.493 99.984 1 12.4 ? O8 858 108 A 1 HETATM 64 O O9 858 . . . C 2 0.611 47.617 102.522 1 12.4 ? O9 858 108 A 1 HETATM 65 O O10 858 . . . C 2 1.7 50.018 105.733 1 12.4 ? O10 858 108 A 1 HETATM 66 O O11 858 . . . C 2 -3.403 45.521 110.382 1 12.4 ? O11 858 108 A 1 HETATM 67 O O12 858 . . . C 2 -5.079 45.876 108.033 1 12.4 ? O12 858 108 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 67 #