data_1QPS # _model_server_result.job_id 8EtVPQwzN2sP390O7KVVqg _model_server_result.datetime_utc '2025-03-21 02:00:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":278}' # _entry.id 1QPS # _exptl.entry_id 1QPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1QPS _cell.length_a 118.4 _cell.length_b 118.4 _cell.length_c 49.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QPS _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OP2 DA 1 N DA 6 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc2 F O HOH . N HOH 20 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc3 F O HOH . N HOH 21 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 C OD2 ASP 75 A ASP 91 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc5 C OE1 GLU 95 A GLU 111 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc6 C O ALA 96 A ALA 112 1_555 D MN MN . A MN 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? hydrog WATSON-CRICK hydrog1 B N1 DA 1 N DA 6 1_555 B N3 DT 4 N DT 9 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 1 N DA 6 1_555 B O4 DT 4 N DT 9 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N1 DA 2 N DA 7 1_555 B N3 DT 3 N DT 8 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N6 DA 2 N DA 7 1_555 B O4 DT 3 N DT 8 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N3 DT 3 N DT 8 1_555 B N1 DA 2 N DA 7 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O4 DT 3 N DT 8 1_555 B N6 DA 2 N DA 7 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N3 DT 4 N DT 9 1_555 B N1 DA 1 N DA 6 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B O4 DT 4 N DT 9 1_555 B N6 DA 1 N DA 6 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QPS _atom_sites.fract_transf_matrix[1][1] 0.008446 _atom_sites.fract_transf_matrix[1][2] 0.004876 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN A 1 278 45 MN MN . E 5 HOH M 1 6 1 HOH HOH . E 5 HOH M 2 7 2 HOH HOH . E 5 HOH M 3 8 6 HOH HOH . E 5 HOH M 4 9 16 HOH HOH . E 5 HOH M 5 10 27 HOH HOH . E 5 HOH M 6 11 41 HOH HOH . F 5 HOH N 1 14 9 HOH HOH . F 5 HOH N 2 15 10 HOH HOH . F 5 HOH N 3 16 12 HOH HOH . F 5 HOH N 4 17 23 HOH HOH . F 5 HOH N 5 18 38 HOH HOH . F 5 HOH N 6 19 40 HOH HOH . F 5 HOH N 7 20 43 HOH HOH . F 5 HOH N 8 21 44 HOH HOH . G 5 HOH A 1 279 3 HOH HOH . G 5 HOH A 2 280 4 HOH HOH . G 5 HOH A 3 281 5 HOH HOH . G 5 HOH A 4 282 7 HOH HOH . G 5 HOH A 5 283 8 HOH HOH . G 5 HOH A 6 284 11 HOH HOH . G 5 HOH A 7 285 13 HOH HOH . G 5 HOH A 8 286 14 HOH HOH . G 5 HOH A 9 287 15 HOH HOH . G 5 HOH A 10 288 17 HOH HOH . G 5 HOH A 11 289 18 HOH HOH . G 5 HOH A 12 290 19 HOH HOH . G 5 HOH A 13 291 20 HOH HOH . G 5 HOH A 14 292 21 HOH HOH . G 5 HOH A 15 293 22 HOH HOH . G 5 HOH A 16 294 24 HOH HOH . G 5 HOH A 17 295 25 HOH HOH . G 5 HOH A 18 296 26 HOH HOH . G 5 HOH A 19 297 28 HOH HOH . G 5 HOH A 20 298 29 HOH HOH . G 5 HOH A 21 299 30 HOH HOH . G 5 HOH A 22 300 31 HOH HOH . G 5 HOH A 23 301 32 HOH HOH . G 5 HOH A 24 302 33 HOH HOH . G 5 HOH A 25 303 34 HOH HOH . G 5 HOH A 26 304 35 HOH HOH . G 5 HOH A 27 305 36 HOH HOH . G 5 HOH A 28 306 37 HOH HOH . G 5 HOH A 29 307 39 HOH HOH . G 5 HOH A 30 308 42 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 27.21 _atom_site.Cartn_y 26.642 _atom_site.Cartn_z 6.636 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 278 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 433 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #