data_1QRQ # _model_server_result.job_id rFDLhBJBOzXVdftBbA3D-A _model_server_result.datetime_utc '2024-12-03 03:31:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qrq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1001}' # _entry.id 1QRQ # _exptl.entry_id 1QRQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QRQ _cell.length_a 156.746 _cell.length_b 114.346 _cell.length_c 93.05 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 156.746 114.346 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 1QRQ _atom_sites.fract_transf_matrix[1][1] 0.00638 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00875 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NDP A 1 1000 1000 NDP NDP . F 2 NDP B 1 1001 1001 NDP NDP . G 2 NDP C 1 1002 1002 NDP NDP . H 2 NDP D 1 1003 1003 NDP NDP . I 3 HOH A 1 1001 1 HOH TIP . I 3 HOH A 2 1002 2 HOH TIP . I 3 HOH A 3 1003 3 HOH TIP . I 3 HOH A 4 1004 4 HOH TIP . I 3 HOH A 5 1005 5 HOH TIP . I 3 HOH A 6 1006 6 HOH TIP . I 3 HOH A 7 1007 7 HOH TIP . I 3 HOH A 8 1008 8 HOH TIP . I 3 HOH A 9 1009 9 HOH TIP . I 3 HOH A 10 1010 10 HOH TIP . I 3 HOH A 11 1011 12 HOH TIP . I 3 HOH A 12 1012 13 HOH TIP . I 3 HOH A 13 1013 14 HOH TIP . I 3 HOH A 14 1014 16 HOH TIP . I 3 HOH A 15 1015 18 HOH TIP . I 3 HOH A 16 1016 19 HOH TIP . I 3 HOH A 17 1017 20 HOH TIP . I 3 HOH A 18 1018 21 HOH TIP . I 3 HOH A 19 1019 22 HOH TIP . I 3 HOH A 20 1020 23 HOH TIP . I 3 HOH A 21 1021 24 HOH TIP . I 3 HOH A 22 1022 25 HOH TIP . I 3 HOH A 23 1023 26 HOH TIP . I 3 HOH A 24 1024 27 HOH TIP . I 3 HOH A 25 1025 28 HOH TIP . I 3 HOH A 26 1026 29 HOH TIP . I 3 HOH A 27 1027 30 HOH TIP . I 3 HOH A 28 1028 31 HOH TIP . I 3 HOH A 29 1029 32 HOH TIP . I 3 HOH A 30 1030 33 HOH TIP . I 3 HOH A 31 1031 34 HOH TIP . I 3 HOH A 32 1032 35 HOH TIP . I 3 HOH A 33 1033 36 HOH TIP . I 3 HOH A 34 1034 37 HOH TIP . I 3 HOH A 35 1035 38 HOH TIP . I 3 HOH A 36 1036 211 HOH TIP . I 3 HOH A 37 1037 215 HOH TIP . I 3 HOH A 38 1038 217 HOH TIP . J 3 HOH B 1 1002 101 HOH TIP . J 3 HOH B 2 1003 102 HOH TIP . J 3 HOH B 3 1004 103 HOH TIP . J 3 HOH B 4 1005 104 HOH TIP . J 3 HOH B 5 1006 105 HOH TIP . J 3 HOH B 6 1007 106 HOH TIP . J 3 HOH B 7 1008 107 HOH TIP . J 3 HOH B 8 1009 108 HOH TIP . J 3 HOH B 9 1010 109 HOH TIP . J 3 HOH B 10 1011 110 HOH TIP . J 3 HOH B 11 1012 112 HOH TIP . J 3 HOH B 12 1013 113 HOH TIP . J 3 HOH B 13 1014 114 HOH TIP . J 3 HOH B 14 1015 116 HOH TIP . J 3 HOH B 15 1016 118 HOH TIP . J 3 HOH B 16 1017 119 HOH TIP . J 3 HOH B 17 1018 120 HOH TIP . J 3 HOH B 18 1019 121 HOH TIP . J 3 HOH B 19 1020 122 HOH TIP . J 3 HOH B 20 1021 123 HOH TIP . J 3 HOH B 21 1022 124 HOH TIP . J 3 HOH B 22 1023 125 HOH TIP . J 3 HOH B 23 1024 126 HOH TIP . J 3 HOH B 24 1025 127 HOH TIP . J 3 HOH B 25 1026 128 HOH TIP . J 3 HOH B 26 1027 129 HOH TIP . J 3 HOH B 27 1028 130 HOH TIP . J 3 HOH B 28 1029 131 HOH TIP . J 3 HOH B 29 1030 132 HOH TIP . J 3 HOH B 30 1031 133 HOH TIP . J 3 HOH B 31 1032 134 HOH TIP . J 3 HOH B 32 1033 135 HOH TIP . J 3 HOH B 33 1034 136 HOH TIP . J 3 HOH B 34 1035 137 HOH TIP . J 3 HOH B 35 1036 138 HOH TIP . J 3 HOH B 36 1037 311 HOH TIP . J 3 HOH B 37 1038 315 HOH TIP . J 3 HOH B 38 1039 317 HOH TIP . K 3 HOH C 1 1003 111 HOH TIP . K 3 HOH C 2 1004 115 HOH TIP . K 3 HOH C 3 1005 117 HOH TIP . K 3 HOH C 4 1006 201 HOH TIP . K 3 HOH C 5 1007 202 HOH TIP . K 3 HOH C 6 1008 203 HOH TIP . K 3 HOH C 7 1009 204 HOH TIP . K 3 HOH C 8 1010 205 HOH TIP . K 3 HOH C 9 1011 206 HOH TIP . K 3 HOH C 10 1012 207 HOH TIP . K 3 HOH C 11 1013 208 HOH TIP . K 3 HOH C 12 1014 209 HOH TIP . K 3 HOH C 13 1015 210 HOH TIP . K 3 HOH C 14 1016 212 HOH TIP . K 3 HOH C 15 1017 213 HOH TIP . K 3 HOH C 16 1018 214 HOH TIP . K 3 HOH C 17 1019 216 HOH TIP . K 3 HOH C 18 1020 218 HOH TIP . K 3 HOH C 19 1021 219 HOH TIP . K 3 HOH C 20 1022 220 HOH TIP . K 3 HOH C 21 1023 221 HOH TIP . K 3 HOH C 22 1024 222 HOH TIP . K 3 HOH C 23 1025 223 HOH TIP . K 3 HOH C 24 1026 224 HOH TIP . K 3 HOH C 25 1027 225 HOH TIP . K 3 HOH C 26 1028 226 HOH TIP . K 3 HOH C 27 1029 227 HOH TIP . K 3 HOH C 28 1030 228 HOH TIP . K 3 HOH C 29 1031 229 HOH TIP . K 3 HOH C 30 1032 230 HOH TIP . K 3 HOH C 31 1033 231 HOH TIP . K 3 HOH C 32 1034 232 HOH TIP . K 3 HOH C 33 1035 233 HOH TIP . K 3 HOH C 34 1036 234 HOH TIP . K 3 HOH C 35 1037 235 HOH TIP . K 3 HOH C 36 1038 236 HOH TIP . K 3 HOH C 37 1039 237 HOH TIP . K 3 HOH C 38 1040 238 HOH TIP . L 3 HOH D 1 1004 11 HOH TIP . L 3 HOH D 2 1005 15 HOH TIP . L 3 HOH D 3 1006 17 HOH TIP . L 3 HOH D 4 1007 301 HOH TIP . L 3 HOH D 5 1008 302 HOH TIP . L 3 HOH D 6 1009 303 HOH TIP . L 3 HOH D 7 1010 304 HOH TIP . L 3 HOH D 8 1011 305 HOH TIP . L 3 HOH D 9 1012 306 HOH TIP . L 3 HOH D 10 1013 307 HOH TIP . L 3 HOH D 11 1014 308 HOH TIP . L 3 HOH D 12 1015 309 HOH TIP . L 3 HOH D 13 1016 310 HOH TIP . L 3 HOH D 14 1017 312 HOH TIP . L 3 HOH D 15 1018 313 HOH TIP . L 3 HOH D 16 1019 314 HOH TIP . L 3 HOH D 17 1020 316 HOH TIP . L 3 HOH D 18 1021 318 HOH TIP . L 3 HOH D 19 1022 319 HOH TIP . L 3 HOH D 20 1023 320 HOH TIP . L 3 HOH D 21 1024 321 HOH TIP . L 3 HOH D 22 1025 322 HOH TIP . L 3 HOH D 23 1026 323 HOH TIP . L 3 HOH D 24 1027 324 HOH TIP . L 3 HOH D 25 1028 325 HOH TIP . L 3 HOH D 26 1029 326 HOH TIP . L 3 HOH D 27 1030 327 HOH TIP . L 3 HOH D 28 1031 328 HOH TIP . L 3 HOH D 29 1032 329 HOH TIP . L 3 HOH D 30 1033 330 HOH TIP . L 3 HOH D 31 1034 331 HOH TIP . L 3 HOH D 32 1035 332 HOH TIP . L 3 HOH D 33 1036 333 HOH TIP . L 3 HOH D 34 1037 334 HOH TIP . L 3 HOH D 35 1038 335 HOH TIP . L 3 HOH D 36 1039 336 HOH TIP . L 3 HOH D 37 1040 337 HOH TIP . L 3 HOH D 38 1041 338 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . F 2 58.318 21.885 81.005 1 73.41 ? PA NDP 1001 B 1 HETATM 2 O O1A NDP . . . F 2 58.072 21.689 79.553 1 77.61 ? O1A NDP 1001 B 1 HETATM 3 O O2A NDP . . . F 2 57.562 23.001 81.618 1 69.79 ? O2A NDP 1001 B 1 HETATM 4 O O5B NDP . . . F 2 57.993 20.553 81.833 1 80.51 ? O5B NDP 1001 B 1 HETATM 5 C C5B NDP . . . F 2 58.67 19.336 81.349 1 78.32 ? C5B NDP 1001 B 1 HETATM 6 C C4B NDP . . . F 2 58.693 18.412 82.597 1 78.34 ? C4B NDP 1001 B 1 HETATM 7 O O4B NDP . . . F 2 57.315 18.127 82.882 1 81.87 ? O4B NDP 1001 B 1 HETATM 8 C C3B NDP . . . F 2 59.406 17.05 82.326 1 77.55 ? C3B NDP 1001 B 1 HETATM 9 O O3B NDP . . . F 2 60.764 17.13 82.677 1 75.74 ? O3B NDP 1001 B 1 HETATM 10 C C2B NDP . . . F 2 58.452 16.087 83.154 1 79.49 ? C2B NDP 1001 B 1 HETATM 11 O O2B NDP . . . F 2 58.689 15.97 84.54 1 83.24 ? O2B NDP 1001 B 1 HETATM 12 C C1B NDP . . . F 2 57.127 16.732 82.956 1 79.88 ? C1B NDP 1001 B 1 HETATM 13 N N9A NDP . . . F 2 56.373 16.354 81.772 1 78.27 ? N9A NDP 1001 B 1 HETATM 14 C C8A NDP . . . F 2 56.586 16.7 80.449 1 76.58 ? C8A NDP 1001 B 1 HETATM 15 N N7A NDP . . . F 2 55.685 16.237 79.632 1 80.3 ? N7A NDP 1001 B 1 HETATM 16 C C5A NDP . . . F 2 54.838 15.567 80.454 1 80.39 ? C5A NDP 1001 B 1 HETATM 17 C C6A NDP . . . F 2 53.651 14.841 80.162 1 79.26 ? C6A NDP 1001 B 1 HETATM 18 N N6A NDP . . . F 2 53.233 14.762 78.899 1 78.96 ? N6A NDP 1001 B 1 HETATM 19 N N1A NDP . . . F 2 52.994 14.244 81.223 1 81.91 ? N1A NDP 1001 B 1 HETATM 20 C C2A NDP . . . F 2 53.52 14.379 82.509 1 83.53 ? C2A NDP 1001 B 1 HETATM 21 N N3A NDP . . . F 2 54.614 15.038 82.867 1 80 ? N3A NDP 1001 B 1 HETATM 22 C C4A NDP . . . F 2 55.224 15.62 81.775 1 80.15 ? C4A NDP 1001 B 1 HETATM 23 O O3 NDP . . . F 2 59.769 21.93 81.366 1 77.94 ? O3 NDP 1001 B 1 HETATM 24 P PN NDP . . . F 2 61.234 22.476 81.456 1 77.45 ? PN NDP 1001 B 1 HETATM 25 O O1N NDP . . . F 2 62.27 21.413 81.696 1 83.55 ? O1N NDP 1001 B 1 HETATM 26 O O2N NDP . . . F 2 61.5 23.875 81.778 1 78.51 ? O2N NDP 1001 B 1 HETATM 27 O O5D NDP . . . F 2 61.372 22.996 79.882 1 67.52 ? O5D NDP 1001 B 1 HETATM 28 C C5D NDP . . . F 2 62.749 23.448 79.782 1 75.41 ? C5D NDP 1001 B 1 HETATM 29 C C4D NDP . . . F 2 63.32 23.628 78.402 1 69.66 ? C4D NDP 1001 B 1 HETATM 30 O O4D NDP . . . F 2 63.122 25.01 77.987 1 72.08 ? O4D NDP 1001 B 1 HETATM 31 C C3D NDP . . . F 2 64.818 23.341 78.479 1 70.93 ? C3D NDP 1001 B 1 HETATM 32 O O3D NDP . . . F 2 65.112 22.193 77.741 1 74.41 ? O3D NDP 1001 B 1 HETATM 33 C C2D NDP . . . F 2 65.486 24.632 77.958 1 69.01 ? C2D NDP 1001 B 1 HETATM 34 O O2D NDP . . . F 2 66.012 24.454 76.635 1 72.96 ? O2D NDP 1001 B 1 HETATM 35 C C1D NDP . . . F 2 64.413 25.723 78.048 1 70.26 ? C1D NDP 1001 B 1 HETATM 36 N N1N NDP . . . F 2 64.645 26.555 79.322 1 69.35 ? N1N NDP 1001 B 1 HETATM 37 C C2N NDP . . . F 2 65.265 27.831 79.099 1 67.74 ? C2N NDP 1001 B 1 HETATM 38 C C3N NDP . . . F 2 65.54 28.605 80.254 1 68.54 ? C3N NDP 1001 B 1 HETATM 39 C C7N NDP . . . F 2 66.227 30.009 80.038 1 67.39 ? C7N NDP 1001 B 1 HETATM 40 O O7N NDP . . . F 2 66.318 30.744 81.009 1 63.75 ? O7N NDP 1001 B 1 HETATM 41 N N7N NDP . . . F 2 66.675 30.308 78.777 1 69.59 ? N7N NDP 1001 B 1 HETATM 42 C C4N NDP . . . F 2 65.241 28.201 81.617 1 71.78 ? C4N NDP 1001 B 1 HETATM 43 C C5N NDP . . . F 2 64.624 26.898 81.687 1 73.07 ? C5N NDP 1001 B 1 HETATM 44 C C6N NDP . . . F 2 64.335 26.096 80.63 1 70.92 ? C6N NDP 1001 B 1 HETATM 45 P P2B NDP . . . F 2 59.745 14.789 85.15 1 81.55 ? P2B NDP 1001 B 1 HETATM 46 O O1X NDP . . . F 2 59.443 15.103 86.574 1 76.87 ? O1X NDP 1001 B 1 HETATM 47 O O2X NDP . . . F 2 59.173 13.525 84.624 1 79.56 ? O2X NDP 1001 B 1 HETATM 48 O O3X NDP . . . F 2 61.058 15.108 84.67 1 86.45 ? O3X NDP 1001 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #