data_1QS2 # _model_server_result.job_id GotS_JbXFtykKp_mhcPbIA _model_server_result.datetime_utc '2024-10-16 10:29:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qs2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1QS2 # _exptl.entry_id 1QS2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QS2 _cell.length_a 53.673 _cell.length_b 70.564 _cell.length_c 142.612 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QS2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1QS2 _atom_sites.fract_transf_matrix[1][1] 0.018631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 500 500 NAD NAD . C 3 HOH A 1 1001 1001 HOH HOH . C 3 HOH A 2 1002 1002 HOH HOH . C 3 HOH A 3 1003 1003 HOH HOH . C 3 HOH A 4 1004 1004 HOH HOH . C 3 HOH A 5 1005 1005 HOH HOH . C 3 HOH A 6 1006 1006 HOH HOH . C 3 HOH A 7 1007 1007 HOH HOH . C 3 HOH A 8 1008 1008 HOH HOH . C 3 HOH A 9 1009 1009 HOH HOH . C 3 HOH A 10 1010 1010 HOH HOH . C 3 HOH A 11 1011 1011 HOH HOH . C 3 HOH A 12 1012 1012 HOH HOH . C 3 HOH A 13 1013 1013 HOH HOH . C 3 HOH A 14 1014 1014 HOH HOH . C 3 HOH A 15 1015 1015 HOH HOH . C 3 HOH A 16 1016 1016 HOH HOH . C 3 HOH A 17 1017 1017 HOH HOH . C 3 HOH A 18 1018 1018 HOH HOH . C 3 HOH A 19 1019 1019 HOH HOH . C 3 HOH A 20 1020 1020 HOH HOH . C 3 HOH A 21 1021 1021 HOH HOH . C 3 HOH A 22 1022 1022 HOH HOH . C 3 HOH A 23 1023 1023 HOH HOH . C 3 HOH A 24 1024 1024 HOH HOH . C 3 HOH A 25 1026 1026 HOH HOH . C 3 HOH A 26 1027 1027 HOH HOH . C 3 HOH A 27 1028 1028 HOH HOH . C 3 HOH A 28 1029 1029 HOH HOH . C 3 HOH A 29 1030 1030 HOH HOH . C 3 HOH A 30 1031 1031 HOH HOH . C 3 HOH A 31 1032 1032 HOH HOH . C 3 HOH A 32 1033 1033 HOH HOH . C 3 HOH A 33 1034 1034 HOH HOH . C 3 HOH A 34 1035 1035 HOH HOH . C 3 HOH A 35 1036 1036 HOH HOH . C 3 HOH A 36 1037 1037 HOH HOH . C 3 HOH A 37 1038 1038 HOH HOH . C 3 HOH A 38 1039 1039 HOH HOH . C 3 HOH A 39 1040 1040 HOH HOH . C 3 HOH A 40 1041 1041 HOH HOH . C 3 HOH A 41 1042 1042 HOH HOH . C 3 HOH A 42 1043 1043 HOH HOH . C 3 HOH A 43 1044 1044 HOH HOH . C 3 HOH A 44 1045 1045 HOH HOH . C 3 HOH A 45 1046 1046 HOH HOH . C 3 HOH A 46 1047 1047 HOH HOH . C 3 HOH A 47 1048 1048 HOH HOH . C 3 HOH A 48 1049 1049 HOH HOH . C 3 HOH A 49 1051 1051 HOH HOH . C 3 HOH A 50 1052 1052 HOH HOH . C 3 HOH A 51 1053 1053 HOH HOH . C 3 HOH A 52 1054 1054 HOH HOH . C 3 HOH A 53 1055 1055 HOH HOH . C 3 HOH A 54 1056 1056 HOH HOH . C 3 HOH A 55 1057 1057 HOH HOH . C 3 HOH A 56 1058 1058 HOH HOH . C 3 HOH A 57 1059 1059 HOH HOH . C 3 HOH A 58 1060 1060 HOH HOH . C 3 HOH A 59 1061 1061 HOH HOH . C 3 HOH A 60 1062 1062 HOH HOH . C 3 HOH A 61 1063 1063 HOH HOH . C 3 HOH A 62 1064 1064 HOH HOH . C 3 HOH A 63 1065 1065 HOH HOH . C 3 HOH A 64 1066 1066 HOH HOH . C 3 HOH A 65 1067 1067 HOH HOH . C 3 HOH A 66 1068 1068 HOH HOH . C 3 HOH A 67 1070 1070 HOH HOH . C 3 HOH A 68 1071 1071 HOH HOH . C 3 HOH A 69 1072 1072 HOH HOH . C 3 HOH A 70 1073 1073 HOH HOH . C 3 HOH A 71 1074 1074 HOH HOH . C 3 HOH A 72 1075 1075 HOH HOH . C 3 HOH A 73 1076 1076 HOH HOH . C 3 HOH A 74 1077 1077 HOH HOH . C 3 HOH A 75 1078 1078 HOH HOH . C 3 HOH A 76 1079 1079 HOH HOH . C 3 HOH A 77 1080 1080 HOH HOH . C 3 HOH A 78 1081 1081 HOH HOH . C 3 HOH A 79 1082 1082 HOH HOH . C 3 HOH A 80 1083 1083 HOH HOH . C 3 HOH A 81 1084 1084 HOH HOH . C 3 HOH A 82 1085 1085 HOH HOH . C 3 HOH A 83 1086 1086 HOH HOH . C 3 HOH A 84 1087 1087 HOH HOH . C 3 HOH A 85 1088 1088 HOH HOH . C 3 HOH A 86 1089 1089 HOH HOH . C 3 HOH A 87 1090 1090 HOH HOH . C 3 HOH A 88 1091 1091 HOH HOH . C 3 HOH A 89 1092 1092 HOH HOH . C 3 HOH A 90 1093 1093 HOH HOH . C 3 HOH A 91 1094 1094 HOH HOH . C 3 HOH A 92 1096 1096 HOH HOH . C 3 HOH A 93 1097 1097 HOH HOH . C 3 HOH A 94 1098 1098 HOH HOH . C 3 HOH A 95 1099 1099 HOH HOH . C 3 HOH A 96 1100 1100 HOH HOH . C 3 HOH A 97 1101 1101 HOH HOH . C 3 HOH A 98 1102 1102 HOH HOH . C 3 HOH A 99 1103 1103 HOH HOH . C 3 HOH A 100 1104 1104 HOH HOH . C 3 HOH A 101 1110 1110 HOH HOH . C 3 HOH A 102 1111 1111 HOH HOH . C 3 HOH A 103 1112 1112 HOH HOH . C 3 HOH A 104 1113 1113 HOH HOH . C 3 HOH A 105 1114 1114 HOH HOH . C 3 HOH A 106 1115 1115 HOH HOH . C 3 HOH A 107 1116 1116 HOH HOH . C 3 HOH A 108 1117 1117 HOH HOH . C 3 HOH A 109 1118 1118 HOH HOH . C 3 HOH A 110 1119 1119 HOH HOH . C 3 HOH A 111 1120 1120 HOH HOH . C 3 HOH A 112 1121 1121 HOH HOH . C 3 HOH A 113 1122 1122 HOH HOH . C 3 HOH A 114 1123 1123 HOH HOH . C 3 HOH A 115 1124 1124 HOH HOH . C 3 HOH A 116 1125 1125 HOH HOH . C 3 HOH A 117 1126 1126 HOH HOH . C 3 HOH A 118 1127 1127 HOH HOH . C 3 HOH A 119 1128 1128 HOH HOH . C 3 HOH A 120 1130 1130 HOH HOH . C 3 HOH A 121 1131 1131 HOH HOH . C 3 HOH A 122 1132 1132 HOH HOH . C 3 HOH A 123 1134 1134 HOH HOH . C 3 HOH A 124 1135 1135 HOH HOH . C 3 HOH A 125 1136 1136 HOH HOH . C 3 HOH A 126 1137 1137 HOH HOH . C 3 HOH A 127 1138 1138 HOH HOH . C 3 HOH A 128 1139 1139 HOH HOH . C 3 HOH A 129 1140 1140 HOH HOH . C 3 HOH A 130 1141 1141 HOH HOH . C 3 HOH A 131 1142 1142 HOH HOH . C 3 HOH A 132 1150 1150 HOH HOH . C 3 HOH A 133 1151 1151 HOH HOH . C 3 HOH A 134 1152 1152 HOH HOH . C 3 HOH A 135 1153 1153 HOH HOH . C 3 HOH A 136 1154 1154 HOH HOH . C 3 HOH A 137 1155 1155 HOH HOH . C 3 HOH A 138 1156 1156 HOH HOH . C 3 HOH A 139 1157 1157 HOH HOH . C 3 HOH A 140 1158 1158 HOH HOH . C 3 HOH A 141 1159 1159 HOH HOH . C 3 HOH A 142 1160 1160 HOH HOH . C 3 HOH A 143 1161 1161 HOH HOH . C 3 HOH A 144 1162 1162 HOH HOH . C 3 HOH A 145 1163 1163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . B 2 28.38 4.241 60.264 1 51.09 ? PA NAD 500 A 1 HETATM 2 O O1A NAD . . . B 2 28.041 3.939 61.701 1 50.63 ? O1A NAD 500 A 1 HETATM 3 O O2A NAD . . . B 2 28.605 5.674 59.972 1 49.99 ? O2A NAD 500 A 1 HETATM 4 O O5B NAD . . . B 2 29.683 3.4 59.745 1 52 ? O5B NAD 500 A 1 HETATM 5 C C5B NAD . . . B 2 30.799 3.153 60.613 1 53.39 ? C5B NAD 500 A 1 HETATM 6 C C4B NAD . . . B 2 32.044 3.465 59.797 1 54.24 ? C4B NAD 500 A 1 HETATM 7 O O4B NAD . . . B 2 31.842 3.612 58.372 1 54.29 ? O4B NAD 500 A 1 HETATM 8 C C3B NAD . . . B 2 32.909 4.625 60.291 1 54.64 ? C3B NAD 500 A 1 HETATM 9 O O3B NAD . . . B 2 34.323 4.367 60.386 1 53.89 ? O3B NAD 500 A 1 HETATM 10 C C2B NAD . . . B 2 32.627 5.681 59.236 1 54.93 ? C2B NAD 500 A 1 HETATM 11 O O2B NAD . . . B 2 33.678 6.644 59.174 1 55.84 ? O2B NAD 500 A 1 HETATM 12 C C1B NAD . . . B 2 32.615 4.763 58.044 1 54.17 ? C1B NAD 500 A 1 HETATM 13 N N9A NAD . . . B 2 33.057 5.187 56.702 1 53.3 ? N9A NAD 500 A 1 HETATM 14 C C8A NAD . . . B 2 34.327 4.891 56.394 1 54.65 ? C8A NAD 500 A 1 HETATM 15 N N7A NAD . . . B 2 34.652 5.266 55.154 1 53.73 ? N7A NAD 500 A 1 HETATM 16 C C5A NAD . . . B 2 33.537 5.802 54.714 1 53.85 ? C5A NAD 500 A 1 HETATM 17 C C6A NAD . . . B 2 33.375 6.341 53.424 1 55.66 ? C6A NAD 500 A 1 HETATM 18 N N6A NAD . . . B 2 34.42 6.322 52.576 1 56.37 ? N6A NAD 500 A 1 HETATM 19 N N1A NAD . . . B 2 32.133 6.861 53.113 1 54.58 ? N1A NAD 500 A 1 HETATM 20 C C2A NAD . . . B 2 31.131 6.853 54.019 1 56 ? C2A NAD 500 A 1 HETATM 21 N N3A NAD . . . B 2 31.336 6.317 55.256 1 54.44 ? N3A NAD 500 A 1 HETATM 22 C C4A NAD . . . B 2 32.505 5.787 55.644 1 53.45 ? C4A NAD 500 A 1 HETATM 23 O O3 NAD . . . B 2 27.223 3.929 59.157 1 52.56 ? O3 NAD 500 A 1 HETATM 24 P PN NAD . . . B 2 25.651 3.598 59.021 1 55.11 ? PN NAD 500 A 1 HETATM 25 O O1N NAD . . . B 2 25.241 4.197 57.714 1 55.51 ? O1N NAD 500 A 1 HETATM 26 O O2N NAD . . . B 2 25.096 4.22 60.252 1 54.13 ? O2N NAD 500 A 1 HETATM 27 O O5D NAD . . . B 2 25.455 2.015 58.869 1 54.53 ? O5D NAD 500 A 1 HETATM 28 C C5D NAD . . . B 2 25.042 1.158 59.948 1 54.31 ? C5D NAD 500 A 1 HETATM 29 C C4D NAD . . . B 2 23.545 0.95 60.169 1 54.81 ? C4D NAD 500 A 1 HETATM 30 O O4D NAD . . . B 2 22.706 2.086 60.453 1 54.73 ? O4D NAD 500 A 1 HETATM 31 C C3D NAD . . . B 2 22.958 0.14 59.074 1 55.68 ? C3D NAD 500 A 1 HETATM 32 O O3D NAD . . . B 2 22.461 -1.111 59.537 1 56.83 ? O3D NAD 500 A 1 HETATM 33 C C2D NAD . . . B 2 21.919 1.028 58.437 1 54.97 ? C2D NAD 500 A 1 HETATM 34 O O2D NAD . . . B 2 20.712 0.329 58.136 1 55.57 ? O2D NAD 500 A 1 HETATM 35 C C1D NAD . . . B 2 21.706 2.148 59.42 1 53.39 ? C1D NAD 500 A 1 HETATM 36 N N1N NAD . . . B 2 21.375 3.511 58.888 1 51.29 ? N1N NAD 500 A 1 HETATM 37 C C2N NAD . . . B 2 22.08 4.666 59.352 1 46.67 ? C2N NAD 500 A 1 HETATM 38 C C3N NAD . . . B 2 21.66 5.948 58.951 1 45.57 ? C3N NAD 500 A 1 HETATM 39 C C7N NAD . . . B 2 22.384 7.189 59.424 1 42.55 ? C7N NAD 500 A 1 HETATM 40 O O7N NAD . . . B 2 21.845 8.246 59.237 1 40.75 ? O7N NAD 500 A 1 HETATM 41 N N7N NAD . . . B 2 23.484 7.116 60.158 1 41.71 ? N7N NAD 500 A 1 HETATM 42 C C4N NAD . . . B 2 20.536 6.05 58.08 1 48.14 ? C4N NAD 500 A 1 HETATM 43 C C5N NAD . . . B 2 19.804 4.955 57.579 1 49.97 ? C5N NAD 500 A 1 HETATM 44 C C6N NAD . . . B 2 20.231 3.673 57.99 1 51.52 ? C6N NAD 500 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #