data_1QSQ # _model_server_result.job_id rYd4xRQuzwcRMn-mT2XcHg _model_server_result.datetime_utc '2024-11-13 22:05:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qsq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":170}' # _entry.id 1QSQ # _exptl.entry_id 1QSQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1QSQ _cell.length_a 60.9 _cell.length_b 60.9 _cell.length_c 96.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 1QSQ _atom_sites.fract_transf_matrix[1][1] 0.01642 _atom_sites.fract_transf_matrix[1][2] 0.00948 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018961 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010363 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 178 178 CL CL . C 2 CL A 1 173 173 CL CL . D 3 HED A 1 170 170 HED HED . E 4 HOH A 1 171 171 HOH HOH . E 4 HOH A 2 172 172 HOH HOH . E 4 HOH A 3 174 174 HOH HOH . E 4 HOH A 4 175 175 HOH HOH . E 4 HOH A 5 177 177 HOH HOH . E 4 HOH A 6 179 179 HOH HOH . E 4 HOH A 7 180 180 HOH HOH . E 4 HOH A 8 181 181 HOH HOH . E 4 HOH A 9 182 182 HOH HOH . E 4 HOH A 10 183 183 HOH HOH . E 4 HOH A 11 184 184 HOH HOH . E 4 HOH A 12 185 185 HOH HOH . E 4 HOH A 13 186 186 HOH HOH . E 4 HOH A 14 187 187 HOH HOH . E 4 HOH A 15 188 188 HOH HOH . E 4 HOH A 16 190 190 HOH HOH . E 4 HOH A 17 191 191 HOH HOH . E 4 HOH A 18 192 192 HOH HOH . E 4 HOH A 19 193 193 HOH HOH . E 4 HOH A 20 195 195 HOH HOH . E 4 HOH A 21 196 196 HOH HOH . E 4 HOH A 22 197 197 HOH HOH . E 4 HOH A 23 198 198 HOH HOH . E 4 HOH A 24 200 200 HOH HOH . E 4 HOH A 25 201 201 HOH HOH . E 4 HOH A 26 202 202 HOH HOH . E 4 HOH A 27 203 203 HOH HOH . E 4 HOH A 28 204 204 HOH HOH . E 4 HOH A 29 206 206 HOH HOH . E 4 HOH A 30 207 207 HOH HOH . E 4 HOH A 31 208 208 HOH HOH . E 4 HOH A 32 209 209 HOH HOH . E 4 HOH A 33 210 210 HOH HOH . E 4 HOH A 34 211 211 HOH HOH . E 4 HOH A 35 213 213 HOH HOH . E 4 HOH A 36 214 214 HOH HOH . E 4 HOH A 37 215 215 HOH HOH . E 4 HOH A 38 216 216 HOH HOH . E 4 HOH A 39 218 218 HOH HOH . E 4 HOH A 40 219 219 HOH HOH . E 4 HOH A 41 220 220 HOH HOH . E 4 HOH A 42 221 221 HOH HOH . E 4 HOH A 43 222 222 HOH HOH . E 4 HOH A 44 223 223 HOH HOH . E 4 HOH A 45 224 224 HOH HOH . E 4 HOH A 46 225 225 HOH HOH . E 4 HOH A 47 226 226 HOH HOH . E 4 HOH A 48 227 227 HOH HOH . E 4 HOH A 49 229 229 HOH HOH . E 4 HOH A 50 230 230 HOH HOH . E 4 HOH A 51 231 231 HOH HOH . E 4 HOH A 52 232 232 HOH HOH . E 4 HOH A 53 233 233 HOH HOH . E 4 HOH A 54 234 234 HOH HOH . E 4 HOH A 55 235 235 HOH HOH . E 4 HOH A 56 236 236 HOH HOH . E 4 HOH A 57 237 237 HOH HOH . E 4 HOH A 58 238 238 HOH HOH . E 4 HOH A 59 239 239 HOH HOH . E 4 HOH A 60 240 240 HOH HOH . E 4 HOH A 61 242 242 HOH HOH . E 4 HOH A 62 244 244 HOH HOH . E 4 HOH A 63 245 245 HOH HOH . E 4 HOH A 64 246 246 HOH HOH . E 4 HOH A 65 249 249 HOH HOH . E 4 HOH A 66 250 250 HOH HOH . E 4 HOH A 67 251 251 HOH HOH . E 4 HOH A 68 253 253 HOH HOH . E 4 HOH A 69 256 256 HOH HOH . E 4 HOH A 70 257 257 HOH HOH . E 4 HOH A 71 259 259 HOH HOH . E 4 HOH A 72 261 261 HOH HOH . E 4 HOH A 73 263 263 HOH HOH . E 4 HOH A 74 266 266 HOH HOH . E 4 HOH A 75 268 268 HOH HOH . E 4 HOH A 76 269 269 HOH HOH . E 4 HOH A 77 270 270 HOH HOH . E 4 HOH A 78 271 271 HOH HOH . E 4 HOH A 79 273 273 HOH HOH . E 4 HOH A 80 274 274 HOH HOH . E 4 HOH A 81 276 276 HOH HOH . E 4 HOH A 82 278 278 HOH HOH . E 4 HOH A 83 279 279 HOH HOH . E 4 HOH A 84 280 280 HOH HOH . E 4 HOH A 85 281 281 HOH HOH . E 4 HOH A 86 283 283 HOH HOH . E 4 HOH A 87 284 284 HOH HOH . E 4 HOH A 88 285 285 HOH HOH . E 4 HOH A 89 286 286 HOH HOH . E 4 HOH A 90 288 288 HOH HOH . E 4 HOH A 91 289 289 HOH HOH . E 4 HOH A 92 290 290 HOH HOH . E 4 HOH A 93 293 293 HOH HOH . E 4 HOH A 94 294 294 HOH HOH . E 4 HOH A 95 295 295 HOH HOH . E 4 HOH A 96 299 299 HOH HOH . E 4 HOH A 97 300 300 HOH HOH . E 4 HOH A 98 301 301 HOH HOH . E 4 HOH A 99 302 302 HOH HOH . E 4 HOH A 100 303 303 HOH HOH . E 4 HOH A 101 304 304 HOH HOH . E 4 HOH A 102 306 306 HOH HOH . E 4 HOH A 103 307 307 HOH HOH . E 4 HOH A 104 308 308 HOH HOH . E 4 HOH A 105 309 309 HOH HOH . E 4 HOH A 106 311 311 HOH HOH . E 4 HOH A 107 312 312 HOH HOH . E 4 HOH A 108 313 313 HOH HOH . E 4 HOH A 109 316 316 HOH HOH . E 4 HOH A 110 317 317 HOH HOH . E 4 HOH A 111 321 321 HOH HOH . E 4 HOH A 112 322 322 HOH HOH . E 4 HOH A 113 323 323 HOH HOH . E 4 HOH A 114 324 324 HOH HOH . E 4 HOH A 115 325 325 HOH HOH . E 4 HOH A 116 326 326 HOH HOH . E 4 HOH A 117 327 327 HOH HOH . E 4 HOH A 118 328 328 HOH HOH . E 4 HOH A 119 329 329 HOH HOH . E 4 HOH A 120 330 330 HOH HOH . E 4 HOH A 121 331 331 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 3 31.905 -1.227 15.088 1 31.47 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . D 3 33.108 -0.9 15.804 1 42.75 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . D 3 32.053 -0.689 13.67 1 28.46 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . D 3 33.558 -1.393 12.964 1 44.23 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . D 3 33.728 -0.713 11.065 1 66.18 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . D 3 32.692 -1.856 10.077 1 51.02 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . D 3 33.465 -3.013 9.396 1 57.82 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . D 3 34.646 -2.524 8.792 1 43.77 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #