data_1QSX # _model_server_result.job_id SkVdywR6W_whIaURM9ZapQ _model_server_result.datetime_utc '2024-10-18 16:20:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qsx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":25}' # _entry.id 1QSX # _exptl.entry_id 1QSX _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 424.498 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QSX _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B N7 DA 9 B DA 21 1_555 Q NA NA . B NA 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 12 B DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DT 2 A DT 2 1_555 B N1 DA 11 B DA 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 DT 2 A DT 2 1_555 B N6 DA 11 B DA 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DT 3 A DT 3 1_555 B N1 DA 10 B DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O4 DT 3 A DT 3 1_555 B N6 DA 10 B DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DT 4 A DT 4 1_555 B N1 DA 9 B DA 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O4 DT 4 A DT 4 1_555 B N6 DA 9 B DA 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N3 DT 5 A DT 5 1_555 B N1 DA 8 B DA 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O4 DT 5 A DT 5 1_555 B N6 DA 8 B DA 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DG 6 A DG 6 1_555 B N3 DC 7 B DC 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N2 DG 6 A DG 6 1_555 B O2 DC 7 B DC 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O6 DG 6 A DG 6 1_555 B N4 DC 7 B DC 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N3 DC 7 A DC 7 1_555 B N1 DG 6 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N4 DC 7 A DC 7 1_555 B O6 DG 6 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O2 DC 7 A DC 7 1_555 B N2 DG 6 B DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DA 8 A DA 8 1_555 B N3 DT 5 B DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N6 DA 8 A DA 8 1_555 B O4 DT 5 B DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N1 DA 9 A DA 9 1_555 B N3 DT 4 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N6 DA 9 A DA 9 1_555 B O4 DT 4 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DA 10 A DA 10 1_555 B N3 DT 3 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N6 DA 10 A DA 10 1_555 B O4 DT 3 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DA 11 A DA 11 1_555 B N3 DT 2 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N6 DA 11 A DA 11 1_555 B O4 DT 2 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N1 DG 12 A DG 12 1_555 B N3 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N2 DG 12 A DG 12 1_555 B O2 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A O6 DG 12 A DG 12 1_555 B N4 DC 1 B DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C25 H24 N6 O' _chem_comp.formula_weight 424.498 _chem_comp.id HT _chem_comp.mon_nstd_flag . _chem_comp.name "2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HOECHST 33258' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HT sing 150 n n O1 HO1 HT sing 151 n n C1 C2 HT doub 152 n y C1 C6 HT sing 153 n y C2 C3 HT sing 154 n y C2 H2 HT sing 155 n n C3 C4 HT doub 156 n y C3 H3 HT sing 157 n n C4 C5 HT sing 158 n y C4 C7 HT sing 159 n y C5 C6 HT doub 160 n y C5 H5 HT sing 161 n n C6 H6 HT sing 162 n n C7 N1 HT sing 163 n y C7 N2 HT doub 164 n y N1 C8 HT sing 165 n y N1 HN1 HT sing 166 n n C8 C9 HT doub 167 n y C8 C13 HT sing 168 n y C9 N2 HT sing 169 n y C9 C10 HT sing 170 n y C10 C11 HT doub 171 n y C10 H10 HT sing 172 n n C11 C12 HT sing 173 n y C11 H11 HT sing 174 n n C12 C13 HT doub 175 n y C12 C14 HT sing 176 n y C13 H13 HT sing 177 n n C14 N3 HT sing 178 n y C14 N4 HT doub 179 n y N3 C15 HT sing 180 n y N3 HN3 HT sing 181 n n C15 C16 HT doub 182 n y C15 C20 HT sing 183 n y C16 N4 HT sing 184 n y C16 C17 HT sing 185 n y C17 C18 HT doub 186 n y C17 H17 HT sing 187 n n C18 C19 HT sing 188 n y C18 H18 HT sing 189 n n C19 C20 HT doub 190 n y C19 N5 HT sing 191 n n C20 H20 HT sing 192 n n N5 C21 HT sing 193 n n N5 C24 HT sing 194 n n C21 C22 HT sing 195 n n C21 H211 HT sing 196 n n C21 H212 HT sing 197 n n C22 N6 HT sing 198 n n C22 H221 HT sing 199 n n C22 H222 HT sing 200 n n N6 C23 HT sing 201 n n N6 C25 HT sing 202 n n C23 C24 HT sing 203 n n C23 H231 HT sing 204 n n C23 H232 HT sing 205 n n C24 H241 HT sing 206 n n C24 H242 HT sing 207 n n C25 H253 HT sing 208 n n C25 H252 HT sing 209 n n C25 H251 HT sing 210 n n # _atom_sites.entry_id 1QSX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 28 28 NA NA . D 2 NA A 1 29 29 NA NA . E 2 NA A 1 33 33 NA NA . F 2 NA A 1 34 34 NA NA . G 2 NA A 1 36 36 NA NA . H 2 NA A 1 38 38 NA NA . I 2 NA A 1 45 45 NA NA . J 3 HT B 1 25 25 HT HT . K 3 HT B 1 26 26 HT HT . L 2 NA B 1 27 27 NA NA . M 2 NA B 1 30 30 NA NA . N 2 NA B 1 31 31 NA NA . O 2 NA B 1 32 32 NA NA . P 2 NA B 1 35 35 NA NA . Q 2 NA B 1 37 37 NA NA . R 2 NA B 1 39 39 NA NA . S 2 NA B 1 40 40 NA NA . T 2 NA B 1 41 41 NA NA . U 2 NA B 1 42 42 NA NA . V 2 NA B 1 43 43 NA NA . W 2 NA B 1 44 44 NA NA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HT . . . J 3 18.409 31.882 10.001 1 10 ? O1 HT 25 B 1 HETATM 2 C C1 HT . . . J 3 17.138 31.826 10.479 1 10 ? C1 HT 25 B 1 HETATM 3 C C4 HT . . . J 3 14.503 31.686 11.492 1 10 ? C4 HT 25 B 1 HETATM 4 C C2 HT . . . J 3 16.288 30.773 10.092 1 10 ? C2 HT 25 B 1 HETATM 5 C C3 HT . . . J 3 14.985 30.708 10.602 1 10 ? C3 HT 25 B 1 HETATM 6 C C6 HT . . . J 3 16.656 32.832 11.341 1 10 ? C6 HT 25 B 1 HETATM 7 C C5 HT . . . J 3 15.343 32.766 11.843 1 10 ? C5 HT 25 B 1 HETATM 8 C C7 HT . . . J 3 13.118 31.565 12.031 1 10 ? C7 HT 25 B 1 HETATM 9 N N1 HT . . . J 3 12.426 30.445 11.951 1 10 ? N1 HT 25 B 1 HETATM 10 C C8 HT . . . J 3 11.362 30.649 12.686 1 10 ? C8 HT 25 B 1 HETATM 11 C C9 HT . . . J 3 11.391 31.891 13.23 1 10 ? C9 HT 25 B 1 HETATM 12 N N2 HT . . . J 3 12.58 32.47 12.802 1 10 ? N2 HT 25 B 1 HETATM 13 C C10 HT . . . J 3 10.328 32.251 14.078 1 10 ? C10 HT 25 B 1 HETATM 14 C C11 HT . . . J 3 9.294 31.323 14.323 1 10 ? C11 HT 25 B 1 HETATM 15 C C12 HT . . . J 3 9.306 30.027 13.75 1 10 ? C12 HT 25 B 1 HETATM 16 C C13 HT . . . J 3 10.375 29.683 12.896 1 10 ? C13 HT 25 B 1 HETATM 17 C C14 HT . . . J 3 8.21 29.058 14.062 1 10 ? C14 HT 25 B 1 HETATM 18 N N3 HT . . . J 3 8.243 27.782 13.724 1 10 ? N3 HT 25 B 1 HETATM 19 C C15 HT . . . J 3 7.212 27.248 14.349 1 10 ? C15 HT 25 B 1 HETATM 20 C C16 HT . . . J 3 6.551 28.191 15.066 1 10 ? C16 HT 25 B 1 HETATM 21 N N4 HT . . . J 3 7.205 29.389 14.825 1 10 ? N4 HT 25 B 1 HETATM 22 C C17 HT . . . J 3 5.482 27.772 15.873 1 10 ? C17 HT 25 B 1 HETATM 23 C C18 HT . . . J 3 5.128 26.405 15.893 1 10 ? C18 HT 25 B 1 HETATM 24 C C19 HT . . . J 3 5.786 25.451 15.075 1 10 ? C19 HT 25 B 1 HETATM 25 C C20 HT . . . J 3 6.895 25.883 14.32 1 10 ? C20 HT 25 B 1 HETATM 26 N N5 HT . . . J 3 5.441 24.083 15.113 1 10 ? N5 HT 25 B 1 HETATM 27 C C21 HT . . . J 3 6.408 23.022 15.476 1 10 ? C21 HT 25 B 1 HETATM 28 C C22 HT . . . J 3 6.053 21.687 14.801 1 10 ? C22 HT 25 B 1 HETATM 29 N N6 HT . . . J 3 4.7 21.249 15.215 1 10 ? N6 HT 25 B 1 HETATM 30 C C23 HT . . . J 3 3.718 22.285 14.842 1 10 ? C23 HT 25 B 1 HETATM 31 C C24 HT . . . J 3 4.073 23.636 15.463 1 10 ? C24 HT 25 B 1 HETATM 32 C C25 HT . . . J 3 4.333 19.978 14.554 1 10 ? C25 HT 25 B 1 HETATM 33 H HO1 HT . . . J 3 18.65 30.986 9.681 1 10 ? HO1 HT 25 B 1 HETATM 34 H H2 HT . . . J 3 16.613 30.002 9.412 1 10 ? H2 HT 25 B 1 HETATM 35 H H3 HT . . . J 3 14.344 29.902 10.288 1 10 ? H3 HT 25 B 1 HETATM 36 H H5 HT . . . J 3 14.999 33.529 12.528 1 10 ? H5 HT 25 B 1 HETATM 37 H H6 HT . . . J 3 17.316 33.631 11.636 1 10 ? H6 HT 25 B 1 HETATM 38 H HN1 HT . . . J 3 12.732 29.57 11.544 1 10 ? HN1 HT 25 B 1 HETATM 39 H H10 HT . . . J 3 10.312 33.217 14.556 1 10 ? H10 HT 25 B 1 HETATM 40 H H11 HT . . . J 3 8.497 31.597 14.995 1 10 ? H11 HT 25 B 1 HETATM 41 H H13 HT . . . J 3 10.434 28.721 12.418 1 10 ? H13 HT 25 B 1 HETATM 42 H HN3 HT . . . J 3 8.969 27.306 13.199 1 10 ? HN3 HT 25 B 1 HETATM 43 H H17 HT . . . J 3 4.954 28.481 16.489 1 10 ? H17 HT 25 B 1 HETATM 44 H H18 HT . . . J 3 4.32 26.092 16.539 1 10 ? H18 HT 25 B 1 HETATM 45 H H20 HT . . . J 3 7.47 25.177 13.742 1 10 ? H20 HT 25 B 1 HETATM 46 H H211 HT . . . J 3 7.405 23.322 15.159 1 10 ? H211 HT 25 B 1 HETATM 47 H H212 HT . . . J 3 6.428 22.904 16.559 1 10 ? H212 HT 25 B 1 HETATM 48 H H221 HT . . . J 3 6.099 21.819 13.719 1 10 ? H221 HT 25 B 1 HETATM 49 H H222 HT . . . J 3 6.792 20.929 15.076 1 10 ? H222 HT 25 B 1 HETATM 50 H H231 HT . . . J 3 3.693 22.393 13.757 1 10 ? H231 HT 25 B 1 HETATM 51 H H232 HT . . . J 3 2.719 21.988 15.174 1 10 ? H232 HT 25 B 1 HETATM 52 H H241 HT . . . J 3 3.364 24.376 15.097 1 10 ? H241 HT 25 B 1 HETATM 53 H H242 HT . . . J 3 3.976 23.58 16.549 1 10 ? H242 HT 25 B 1 HETATM 54 H H253 HT . . . J 3 5.134 19.242 14.657 1 10 ? H253 HT 25 B 1 HETATM 55 H H252 HT . . . J 3 4.129 20.136 13.497 1 10 ? H252 HT 25 B 1 HETATM 56 H H251 HT . . . J 3 3.432 19.56 15.014 1 10 ? H251 HT 25 B 1 HETATM 57 H HN6 HT . . . J 3 4.7 21.123 16.238 1 10 ? HN6 HT 25 B 1 # _model_server_stats.io_time_ms 3 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 57 #