data_1QU4
#
_model_server_result.job_id            UD5zgPd2zFIxafsR47YW_A 
_model_server_result.datetime_utc      '2024-10-19 04:48:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1qu4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":600}' 
#
_entry.id    1QU4 
#
_exptl.entry_id    1QU4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              247.142 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "PYRIDOXAL-5'-PHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.3 
_cell.angle_gamma         90 
_cell.entry_id            1QU4 
_cell.length_a            66.8 
_cell.length_b            151.7 
_cell.length_c            85.35 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1QU4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F 1 1 
C,D,G,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 69 A LYS 69 1_555 E C4A PLP . A PLP 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.531 ? 
covale ? covale2 B NZ LYS 69 B LYS 69 1_555 F C4A PLP . B PLP 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? 
covale ? covale3 C NZ LYS 69 C LYS 69 1_555 G C4A PLP . C PLP 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.512 ? 
covale ? covale4 D NZ LYS 69 D LYS 69 1_555 H C4A PLP . D PLP 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.531 ? 
#
_chem_comp.formula           'C8 H10 N O6 P' 
_chem_comp.formula_weight    247.142 
_chem_comp.id                PLP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "PYRIDOXAL-5'-PHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'VITAMIN B6 Phosphate' 
#
_atom_sites.entry_id                     1QU4 
_atom_sites.fract_transf_matrix[1][1]    0.01497 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003264 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006592 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011992 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PLP A 1 600 600 PLP PLP . 
F 2 PLP B 1 600 600 PLP PLP . 
G 2 PLP C 1 600 600 PLP PLP . 
H 2 PLP D 1 600 600 PLP PLP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 PLP . . . F 2 11.854 -9.447 -1.656 1 35.13 ? N1 PLP 600 B 1 
HETATM 2 C C2 PLP . . . F 2 13.065 -8.943 -2.067 1 35.81 ? C2 PLP 600 B 1 
HETATM 3 C C2A PLP . . . F 2 14.281 -9.828 -1.997 1 35.74 ? C2A PLP 600 B 1 
HETATM 4 C C3 PLP . . . F 2 13.16 -7.6 -2.511 1 34.93 ? C3 PLP 600 B 1 
HETATM 5 O O3 PLP . . . F 2 14.292 -6.894 -2.972 1 36.98 ? O3 PLP 600 B 1 
HETATM 6 C C4 PLP . . . F 2 12.029 -6.746 -2.557 1 32.57 ? C4 PLP 600 B 1 
HETATM 7 C C4A PLP . . . F 2 12.4 -5.272 -3.155 1 31.34 ? C4A PLP 600 B 1 
HETATM 8 C C5 PLP . . . F 2 10.777 -7.345 -2.1 1 32.15 ? C5 PLP 600 B 1 
HETATM 9 C C6 PLP . . . F 2 10.771 -8.647 -1.679 1 33.32 ? C6 PLP 600 B 1 
HETATM 10 C C5A PLP . . . F 2 9.437 -6.577 -2.08 1 29.89 ? C5A PLP 600 B 1 
HETATM 11 O O4P PLP . . . F 2 9.121 -6.043 -3.343 1 26.75 ? O4P PLP 600 B 1 
HETATM 12 P P PLP . . . F 2 7.508 -5.615 -3.673 1 26.55 ? P PLP 600 B 1 
HETATM 13 O O1P PLP . . . F 2 7.437 -5.292 -5.143 1 26.43 ? O1P PLP 600 B 1 
HETATM 14 O O2P PLP . . . F 2 7.26 -4.45 -2.76 1 24.15 ? O2P PLP 600 B 1 
HETATM 15 O O3P PLP . . . F 2 6.587 -6.772 -3.307 1 26.28 ? O3P PLP 600 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#