data_1QVI # _model_server_result.job_id ADV5R0PtVsb8LawdagZQ2Q _model_server_result.datetime_utc '2024-11-16 19:50:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 1QVI # _exptl.entry_id 1QVI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.5 _cell.angle_gamma 90 _cell.entry_id 1QVI _cell.length_a 51.375 _cell.length_b 285.623 _cell.length_c 59.831 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 183 A THR 183 1_555 D MG MG . A MG 1997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc2 D MG MG . A MG 1997 1_555 E O1 VO4 . A VO4 1998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 D MG MG . A MG 1997 1_555 F O1B ADP . A ADP 1999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc4 E V VO4 . A VO4 1998 1_555 F O3B ADP . A ADP 1999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc5 B OD2 ASP 30 Y ASP 30 1_555 G MG MG . Y MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc6 B OD1 ASP 30 Y ASP 30 1_555 G MG MG . Y MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? metalc ? metalc7 B OD1 ASP 32 Y ASP 32 1_555 G MG MG . Y MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc8 B O PHE 34 Y PHE 34 1_555 G MG MG . Y MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc9 B OD1 ASP 39 Y ASP 39 1_555 G MG MG . Y MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc10 C OD1 ASP 19 Z ASP 19 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc11 C O ASP 19 Z ASP 19 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc12 C OD2 ASP 22 Z ASP 22 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? metalc ? metalc13 C O GLY 23 Z GLY 23 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc14 C OD2 ASP 25 Z ASP 25 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc15 C O ALA 27 Z ALA 27 1_555 H CA CA . Z CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QVI _atom_sites.fract_transf_matrix[1][1] 0.019465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 1997 1997 MG MG . E 5 VO4 A 1 1998 1998 VO4 VO4 . F 6 ADP A 1 1999 1999 ADP ADP . G 4 MG Y 1 502 502 MG MG . H 7 CA Z 1 503 503 CA CA . I 8 HOH A 1 2000 1 HOH TIP . I 8 HOH A 2 2001 3 HOH TIP . I 8 HOH A 3 2002 4 HOH TIP . I 8 HOH A 4 2003 5 HOH TIP . I 8 HOH A 5 2004 6 HOH TIP . I 8 HOH A 6 2005 7 HOH TIP . I 8 HOH A 7 2006 8 HOH TIP . I 8 HOH A 8 2007 10 HOH TIP . I 8 HOH A 9 2008 11 HOH TIP . I 8 HOH A 10 2009 12 HOH TIP . I 8 HOH A 11 2010 13 HOH TIP . I 8 HOH A 12 2011 14 HOH TIP . I 8 HOH A 13 2012 15 HOH TIP . I 8 HOH A 14 2013 17 HOH TIP . I 8 HOH A 15 2014 19 HOH TIP . I 8 HOH A 16 2015 20 HOH TIP . I 8 HOH A 17 2016 21 HOH TIP . I 8 HOH A 18 2017 22 HOH TIP . I 8 HOH A 19 2018 23 HOH TIP . I 8 HOH A 20 2019 24 HOH TIP . I 8 HOH A 21 2020 25 HOH TIP . I 8 HOH A 22 2021 26 HOH TIP . I 8 HOH A 23 2022 27 HOH TIP . I 8 HOH A 24 2023 28 HOH TIP . I 8 HOH A 25 2024 29 HOH TIP . I 8 HOH A 26 2025 30 HOH TIP . I 8 HOH A 27 2026 31 HOH TIP . I 8 HOH A 28 2027 33 HOH TIP . I 8 HOH A 29 2028 34 HOH TIP . I 8 HOH A 30 2029 37 HOH TIP . I 8 HOH A 31 2030 38 HOH TIP . I 8 HOH A 32 2031 39 HOH TIP . I 8 HOH A 33 2032 40 HOH TIP . I 8 HOH A 34 2033 41 HOH TIP . I 8 HOH A 35 2034 42 HOH TIP . I 8 HOH A 36 2035 43 HOH TIP . I 8 HOH A 37 2036 44 HOH TIP . I 8 HOH A 38 2037 45 HOH TIP . I 8 HOH A 39 2038 46 HOH TIP . I 8 HOH A 40 2039 48 HOH TIP . I 8 HOH A 41 2040 49 HOH TIP . I 8 HOH A 42 2041 50 HOH TIP . I 8 HOH A 43 2042 52 HOH TIP . J 8 HOH Y 1 503 18 HOH TIP . J 8 HOH Y 2 504 51 HOH TIP . K 8 HOH Z 1 504 2 HOH TIP . K 8 HOH Z 2 505 9 HOH TIP . K 8 HOH Z 3 506 16 HOH TIP . K 8 HOH Z 4 507 32 HOH TIP . K 8 HOH Z 5 508 35 HOH TIP . K 8 HOH Z 6 509 36 HOH TIP . K 8 HOH Z 7 510 47 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 52.519 _atom_site.Cartn_y 87.746 _atom_site.Cartn_z 85.924 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id Y _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #