data_1QXR # _model_server_result.job_id upaSDbnXweW2re04RWSrNA _model_server_result.datetime_utc '2024-11-24 01:30:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 1QXR # _exptl.entry_id 1QXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 73.7 _cell.angle_beta 78.5 _cell.angle_gamma 72.6 _cell.entry_id 1QXR _cell.length_a 36 _cell.length_b 39.7 _cell.length_c 74.7 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 88 A HIS 88 1_555 C NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc2 A OE2 GLU 97 A GLU 97 1_555 C NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc3 A NE2 HIS 136 A HIS 136 1_555 C NI NI . A NI 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc4 C NI NI . A NI 200 1_555 D O1A PA5 . A PA5 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc5 C NI NI . A NI 200 1_555 G O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc6 B NE2 HIS 88 B HIS 88 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc7 B NE2 HIS 90 B HIS 90 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc8 B OE2 GLU 97 B GLU 97 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc9 B NE2 HIS 136 B HIS 136 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc10 E NI NI . B NI 201 1_555 F O1A PA5 . B PA5 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc11 E NI NI . B NI 201 1_555 H O HOH . B HOH 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QXR _atom_sites.fract_transf_matrix[1][1] 0.027797 _atom_sites.fract_transf_matrix[1][2] -0.008693 _atom_sites.fract_transf_matrix[1][3] -0.003708 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02637 _atom_sites.fract_transf_matrix[2][3] -0.006404 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014052 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI A 1 200 200 NI FE . D 3 PA5 A 1 300 300 PA5 PA5 . E 2 NI B 1 201 200 NI FE . F 3 PA5 B 1 301 300 PA5 PA5 . G 4 HOH A 1 301 4 HOH HOH . G 4 HOH A 2 302 5 HOH HOH . G 4 HOH A 3 303 6 HOH HOH . G 4 HOH A 4 304 7 HOH HOH . G 4 HOH A 5 305 10 HOH HOH . G 4 HOH A 6 306 12 HOH HOH . G 4 HOH A 7 307 18 HOH HOH . G 4 HOH A 8 308 19 HOH HOH . G 4 HOH A 9 309 21 HOH HOH . G 4 HOH A 10 310 26 HOH HOH . G 4 HOH A 11 311 27 HOH HOH . G 4 HOH A 12 312 28 HOH HOH . G 4 HOH A 13 313 29 HOH HOH . G 4 HOH A 14 314 34 HOH HOH . G 4 HOH A 15 315 35 HOH HOH . G 4 HOH A 16 316 36 HOH HOH . G 4 HOH A 17 317 37 HOH HOH . G 4 HOH A 18 318 44 HOH HOH . G 4 HOH A 19 319 47 HOH HOH . G 4 HOH A 20 320 51 HOH HOH . G 4 HOH A 21 321 53 HOH HOH . G 4 HOH A 22 322 54 HOH HOH . G 4 HOH A 23 323 56 HOH HOH . G 4 HOH A 24 324 60 HOH HOH . G 4 HOH A 25 325 61 HOH HOH . G 4 HOH A 26 326 62 HOH HOH . G 4 HOH A 27 327 73 HOH HOH . G 4 HOH A 28 328 74 HOH HOH . G 4 HOH A 29 329 75 HOH HOH . G 4 HOH A 30 330 79 HOH HOH . G 4 HOH A 31 331 80 HOH HOH . G 4 HOH A 32 332 82 HOH HOH . G 4 HOH A 33 333 84 HOH HOH . G 4 HOH A 34 334 85 HOH HOH . G 4 HOH A 35 335 92 HOH HOH . G 4 HOH A 36 336 93 HOH HOH . G 4 HOH A 37 337 94 HOH HOH . G 4 HOH A 38 338 97 HOH HOH . G 4 HOH A 39 339 100 HOH HOH . G 4 HOH A 40 340 103 HOH HOH . G 4 HOH A 41 341 117 HOH HOH . G 4 HOH A 42 342 119 HOH HOH . G 4 HOH A 43 343 121 HOH HOH . G 4 HOH A 44 344 122 HOH HOH . G 4 HOH A 45 345 123 HOH HOH . G 4 HOH A 46 346 124 HOH HOH . G 4 HOH A 47 347 126 HOH HOH . H 4 HOH B 1 302 1 HOH HOH . H 4 HOH B 2 303 2 HOH HOH . H 4 HOH B 3 304 3 HOH HOH . H 4 HOH B 4 305 8 HOH HOH . H 4 HOH B 5 306 9 HOH HOH . H 4 HOH B 6 307 11 HOH HOH . H 4 HOH B 7 308 13 HOH HOH . H 4 HOH B 8 309 14 HOH HOH . H 4 HOH B 9 310 15 HOH HOH . H 4 HOH B 10 311 16 HOH HOH . H 4 HOH B 11 312 17 HOH HOH . H 4 HOH B 12 313 20 HOH HOH . H 4 HOH B 13 314 22 HOH HOH . H 4 HOH B 14 315 23 HOH HOH . H 4 HOH B 15 316 24 HOH HOH . H 4 HOH B 16 317 25 HOH HOH . H 4 HOH B 17 318 30 HOH HOH . H 4 HOH B 18 319 31 HOH HOH . H 4 HOH B 19 320 32 HOH HOH . H 4 HOH B 20 321 33 HOH HOH . H 4 HOH B 21 322 38 HOH HOH . H 4 HOH B 22 323 39 HOH HOH . H 4 HOH B 23 324 40 HOH HOH . H 4 HOH B 24 325 41 HOH HOH . H 4 HOH B 25 326 42 HOH HOH . H 4 HOH B 26 327 43 HOH HOH . H 4 HOH B 27 328 45 HOH HOH . H 4 HOH B 28 329 46 HOH HOH . H 4 HOH B 29 330 48 HOH HOH . H 4 HOH B 30 331 49 HOH HOH . H 4 HOH B 31 332 50 HOH HOH . H 4 HOH B 32 333 52 HOH HOH . H 4 HOH B 33 334 55 HOH HOH . H 4 HOH B 34 335 57 HOH HOH . H 4 HOH B 35 336 58 HOH HOH . H 4 HOH B 36 337 59 HOH HOH . H 4 HOH B 37 338 63 HOH HOH . H 4 HOH B 38 339 64 HOH HOH . H 4 HOH B 39 340 65 HOH HOH . H 4 HOH B 40 341 66 HOH HOH . H 4 HOH B 41 342 67 HOH HOH . H 4 HOH B 42 343 68 HOH HOH . H 4 HOH B 43 344 69 HOH HOH . H 4 HOH B 44 345 70 HOH HOH . H 4 HOH B 45 346 71 HOH HOH . H 4 HOH B 46 347 72 HOH HOH . H 4 HOH B 47 348 76 HOH HOH . H 4 HOH B 48 349 77 HOH HOH . H 4 HOH B 49 350 78 HOH HOH . H 4 HOH B 50 351 81 HOH HOH . H 4 HOH B 51 352 83 HOH HOH . H 4 HOH B 52 353 86 HOH HOH . H 4 HOH B 53 354 87 HOH HOH . H 4 HOH B 54 355 88 HOH HOH . H 4 HOH B 55 356 89 HOH HOH . H 4 HOH B 56 357 90 HOH HOH . H 4 HOH B 57 358 91 HOH HOH . H 4 HOH B 58 359 95 HOH HOH . H 4 HOH B 59 360 96 HOH HOH . H 4 HOH B 60 361 98 HOH HOH . H 4 HOH B 61 362 99 HOH HOH . H 4 HOH B 62 363 101 HOH HOH . H 4 HOH B 63 364 102 HOH HOH . H 4 HOH B 64 365 104 HOH HOH . H 4 HOH B 65 366 105 HOH HOH . H 4 HOH B 66 367 106 HOH HOH . H 4 HOH B 67 368 107 HOH HOH . H 4 HOH B 68 369 108 HOH HOH . H 4 HOH B 69 370 109 HOH HOH . H 4 HOH B 70 371 110 HOH HOH . H 4 HOH B 71 372 111 HOH HOH . H 4 HOH B 72 373 112 HOH HOH . H 4 HOH B 73 374 113 HOH HOH . H 4 HOH B 74 375 114 HOH HOH . H 4 HOH B 75 376 115 HOH HOH . H 4 HOH B 76 377 116 HOH HOH . H 4 HOH B 77 378 118 HOH HOH . H 4 HOH B 78 379 120 HOH HOH . H 4 HOH B 79 380 125 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.718 _atom_site.Cartn_y 8.888 _atom_site.Cartn_z -8.38 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 492 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #