data_1QZ4 # _model_server_result.job_id 3_jpKxuDlc31LYcMuyHB-w _model_server_result.datetime_utc '2025-07-03 20:50:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1qz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":305}' # _entry.id 1QZ4 # _exptl.entry_id 1QZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1QZ4 _cell.length_a 43.102 _cell.length_b 62.749 _cell.length_c 68.399 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QZ4 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 3 A LYS 3 3_655 H HG HG . A HG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? metalc ? metalc2 A O LEU 12 A LEU 12 1_555 C HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.232 ? metalc ? metalc3 A SG CYS 16 A CYS 16 1_555 C HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc4 A N CYS 16 A CYS 16 1_555 C HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.37 ? metalc ? metalc5 A O LEU 21 A LEU 21 1_555 J HG HG . A HG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.428 ? metalc ? metalc6 A ND1 HIS 27 A HIS 27 1_555 F HG HG . A HG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 A N CYS 31 A CYS 31 1_555 E HG HG . A HG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.508 ? metalc ? metalc8 A O CYS 31 A CYS 31 1_555 E HG HG . A HG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.172 ? metalc ? metalc9 A SG CYS 31 A CYS 31 1_555 E HG HG . A HG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc10 A SG CYS 31 A CYS 31 1_555 J HG HG . A HG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc11 A O ARG 118 A ARG 118 1_555 K HG HG . A HG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc12 A OE1 GLU 121 A GLU 121 1_555 G HG HG . A HG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc13 A OE2 GLU 121 A GLU 121 1_555 G HG HG . A HG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.506 ? metalc ? metalc14 A OE1 GLU 121 A GLU 121 1_555 H HG HG . A HG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc15 A NE2 HIS 122 A HIS 122 1_555 H HG HG . A HG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc16 A ND1 HIS 122 A HIS 122 1_555 K HG HG . A HG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc17 A O LEU 172 A LEU 172 1_555 L HG HG . A HG 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.377 ? metalc ? metalc18 A ND1 HIS 182 A HIS 182 1_555 I HG HG . A HG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc19 A O GLY 186 A GLY 186 1_555 I HG HG . A HG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc20 A ND1 HIS 208 A HIS 208 1_555 D HG HG . A HG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.304 ? metalc ? metalc21 A NE2 HIS 208 A HIS 208 1_555 D HG HG . A HG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.331 ? metalc ? metalc22 B O4 PO4 . A PO4 214 1_555 I HG HG . A HG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? metalc ? metalc23 C HG HG . A HG 301 1_555 M O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? metalc ? metalc24 D HG HG . A HG 302 1_555 M O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.204 ? metalc ? metalc25 E HG HG . A HG 303 1_555 M O HOH . A HOH 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc26 E HG HG . A HG 303 1_555 M O HOH . A HOH 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc27 F HG HG . A HG 304 1_555 M O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.856 ? metalc ? metalc28 F HG HG . A HG 304 1_555 M O HOH . A HOH 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.756 ? metalc ? metalc29 G HG HG . A HG 305 1_555 H HG HG . A HG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc30 G HG HG . A HG 305 1_555 M O HOH . A HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.461 ? metalc ? metalc31 G HG HG . A HG 305 1_555 M O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.546 ? metalc ? metalc32 H HG HG . A HG 306 1_555 M O HOH . A HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc33 H HG HG . A HG 306 1_555 M O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.13 ? metalc ? metalc34 I HG HG . A HG 307 1_555 M O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc35 I HG HG . A HG 307 1_555 M O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1QZ4 _atom_sites.fract_transf_matrix[1][1] 0.023201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 214 1 PO4 PO4 . C 3 HG A 1 301 1 HG HG . D 3 HG A 1 302 2 HG HG . E 3 HG A 1 303 3 HG HG . F 3 HG A 1 304 4 HG HG . G 3 HG A 1 305 5 HG HG . H 3 HG A 1 306 6 HG HG . I 3 HG A 1 307 7 HG HG . J 3 HG A 1 308 8 HG HG . K 3 HG A 1 309 9 HG HG . L 3 HG A 1 310 10 HG HG . M 4 HOH A 1 311 1 HOH HOH . M 4 HOH A 2 312 2 HOH HOH . M 4 HOH A 3 313 3 HOH HOH . M 4 HOH A 4 314 4 HOH HOH . M 4 HOH A 5 315 5 HOH HOH . M 4 HOH A 6 316 6 HOH HOH . M 4 HOH A 7 317 7 HOH HOH . M 4 HOH A 8 318 8 HOH HOH . M 4 HOH A 9 319 9 HOH HOH . M 4 HOH A 10 320 10 HOH HOH . M 4 HOH A 11 321 11 HOH HOH . M 4 HOH A 12 322 12 HOH HOH . M 4 HOH A 13 323 13 HOH HOH . M 4 HOH A 14 324 14 HOH HOH . M 4 HOH A 15 325 15 HOH HOH . M 4 HOH A 16 326 16 HOH HOH . M 4 HOH A 17 327 17 HOH HOH . M 4 HOH A 18 328 18 HOH HOH . M 4 HOH A 19 329 19 HOH HOH . M 4 HOH A 20 330 20 HOH HOH . M 4 HOH A 21 331 21 HOH HOH . M 4 HOH A 22 332 22 HOH HOH . M 4 HOH A 23 333 23 HOH HOH . M 4 HOH A 24 334 24 HOH HOH . M 4 HOH A 25 335 25 HOH HOH . M 4 HOH A 26 336 26 HOH HOH . M 4 HOH A 27 337 27 HOH HOH . M 4 HOH A 28 338 28 HOH HOH . M 4 HOH A 29 339 29 HOH HOH . M 4 HOH A 30 340 30 HOH HOH . M 4 HOH A 31 341 31 HOH HOH . M 4 HOH A 32 342 32 HOH HOH . M 4 HOH A 33 343 33 HOH HOH . M 4 HOH A 34 344 34 HOH HOH . M 4 HOH A 35 345 35 HOH HOH . M 4 HOH A 36 346 36 HOH HOH . M 4 HOH A 37 347 37 HOH HOH . M 4 HOH A 38 348 38 HOH HOH . M 4 HOH A 39 349 39 HOH HOH . M 4 HOH A 40 350 40 HOH HOH . M 4 HOH A 41 351 41 HOH HOH . M 4 HOH A 42 352 42 HOH HOH . M 4 HOH A 43 353 43 HOH HOH . M 4 HOH A 44 354 44 HOH HOH . M 4 HOH A 45 355 45 HOH HOH . M 4 HOH A 46 356 46 HOH HOH . M 4 HOH A 47 357 47 HOH HOH . M 4 HOH A 48 358 48 HOH HOH . M 4 HOH A 49 359 49 HOH HOH . M 4 HOH A 50 360 50 HOH HOH . M 4 HOH A 51 361 51 HOH HOH . M 4 HOH A 52 362 52 HOH HOH . M 4 HOH A 53 363 53 HOH HOH . M 4 HOH A 54 364 54 HOH HOH . M 4 HOH A 55 365 55 HOH HOH . M 4 HOH A 56 366 56 HOH HOH . M 4 HOH A 57 367 57 HOH HOH . M 4 HOH A 58 368 58 HOH HOH . M 4 HOH A 59 369 59 HOH HOH . M 4 HOH A 60 370 60 HOH HOH . M 4 HOH A 61 371 61 HOH HOH . M 4 HOH A 62 372 62 HOH HOH . M 4 HOH A 63 373 63 HOH HOH . M 4 HOH A 64 374 64 HOH HOH . M 4 HOH A 65 375 65 HOH HOH . M 4 HOH A 66 376 66 HOH HOH . M 4 HOH A 67 377 67 HOH HOH . M 4 HOH A 68 378 68 HOH HOH . M 4 HOH A 69 379 69 HOH HOH . M 4 HOH A 70 380 70 HOH HOH . M 4 HOH A 71 381 71 HOH HOH . M 4 HOH A 72 382 72 HOH HOH . M 4 HOH A 73 383 73 HOH HOH . M 4 HOH A 74 384 74 HOH HOH . M 4 HOH A 75 385 75 HOH HOH . M 4 HOH A 76 386 76 HOH HOH . M 4 HOH A 77 387 77 HOH HOH . M 4 HOH A 78 388 78 HOH HOH . M 4 HOH A 79 389 79 HOH HOH . M 4 HOH A 80 390 80 HOH HOH . M 4 HOH A 81 391 81 HOH HOH . M 4 HOH A 82 392 82 HOH HOH . M 4 HOH A 83 393 83 HOH HOH . M 4 HOH A 84 394 84 HOH HOH . M 4 HOH A 85 395 85 HOH HOH . M 4 HOH A 86 396 86 HOH HOH . M 4 HOH A 87 397 87 HOH HOH . M 4 HOH A 88 398 88 HOH HOH . M 4 HOH A 89 399 89 HOH HOH . M 4 HOH A 90 400 90 HOH HOH . M 4 HOH A 91 401 91 HOH HOH . M 4 HOH A 92 402 92 HOH HOH . M 4 HOH A 93 403 93 HOH HOH . M 4 HOH A 94 404 94 HOH HOH . M 4 HOH A 95 405 95 HOH HOH . M 4 HOH A 96 406 96 HOH HOH . M 4 HOH A 97 407 97 HOH HOH . M 4 HOH A 98 408 98 HOH HOH . M 4 HOH A 99 409 99 HOH HOH . M 4 HOH A 100 410 100 HOH HOH . M 4 HOH A 101 411 101 HOH HOH . M 4 HOH A 102 412 102 HOH HOH . M 4 HOH A 103 413 103 HOH HOH . M 4 HOH A 104 414 104 HOH HOH . M 4 HOH A 105 415 105 HOH HOH . M 4 HOH A 106 416 106 HOH HOH . M 4 HOH A 107 417 107 HOH HOH . M 4 HOH A 108 418 108 HOH HOH . M 4 HOH A 109 419 109 HOH HOH . M 4 HOH A 110 420 110 HOH HOH . M 4 HOH A 111 421 111 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.971 _atom_site.Cartn_y 49.282 _atom_site.Cartn_z 24.289 _atom_site.occupancy 0.24 _atom_site.B_iso_or_equiv 37.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 305 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #