data_1R13
#
_model_server_result.job_id            HA9_pv33SwESO0YKV1eNcQ 
_model_server_result.datetime_utc      '2024-11-24 22:46:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1r13 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":700}' 
#
_entry.id    1R13 
#
_exptl.entry_id    1R13 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              195.237 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1R13 
_cell.length_a            97.68 
_cell.length_b            97.68 
_cell.length_c            44.54 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1R13 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 97.68 0 0 
3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 48.84 84.593361 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 55 A CYS 135 1_555 A SG CYS 146 A CYS 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 A SG CYS 124 A CYS 204 1_555 A SG CYS 138 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc1 A OE1 GLU 115 A GLU 195 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? 
metalc ? metalc2 A O ARG 117 A ARG 197 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? 
metalc ? metalc3 A OD1 ASN 134 A ASN 214 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc4 A O ASP 135 A ASP 215 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc5 A OD1 ASP 135 A ASP 215 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc6 B CA CA . A CA 300 1_555 E O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? 
metalc ? metalc7 B CA CA . A CA 300 1_555 E O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
#
_chem_comp.formula           'C6 H13 N O4 S' 
_chem_comp.formula_weight    195.237 
_chem_comp.id                MES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 MES sing 218 n n 
O1 C6 MES sing 219 n n 
C2 C3 MES sing 220 n n 
C2 H21 MES sing 221 n n 
C2 H22 MES sing 222 n n 
C3 N4 MES sing 223 n n 
C3 H31 MES sing 224 n n 
C3 H32 MES sing 225 n n 
N4 C5 MES sing 226 n n 
N4 C7 MES sing 227 n n 
N4 HN4 MES sing 228 n n 
C5 C6 MES sing 229 n n 
C5 H51 MES sing 230 n n 
C5 H52 MES sing 231 n n 
C6 H61 MES sing 232 n n 
C6 H62 MES sing 233 n n 
C7 C8 MES sing 234 n n 
C7 H71 MES sing 235 n n 
C7 H72 MES sing 236 n n 
C8 S MES sing 237 n n 
C8 H81 MES sing 238 n n 
C8 H82 MES sing 239 n n 
S O1S MES doub 240 n n 
S O2S MES doub 241 n n 
S O3S MES sing 242 n n 
#
_atom_sites.entry_id                     1R13 
_atom_sites.fract_transf_matrix[1][1]    0.010238 
_atom_sites.fract_transf_matrix[1][2]    0.005911 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011821 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022452 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 300 300 CA CA . 
C 3 SO4 A 1 350 350 SO4 SO4 . 
D 4 MES A 1 700 700 MES MES . 
E 5 HOH A 1 401 401 HOH HOH . 
E 5 HOH A 2 402 402 HOH HOH . 
E 5 HOH A 3 403 403 HOH HOH . 
E 5 HOH A 4 405 405 HOH HOH . 
E 5 HOH A 5 406 406 HOH HOH . 
E 5 HOH A 6 407 407 HOH HOH . 
E 5 HOH A 7 408 408 HOH HOH . 
E 5 HOH A 8 409 409 HOH HOH . 
E 5 HOH A 9 410 410 HOH HOH . 
E 5 HOH A 10 411 411 HOH HOH . 
E 5 HOH A 11 412 412 HOH HOH . 
E 5 HOH A 12 413 413 HOH HOH . 
E 5 HOH A 13 414 414 HOH HOH . 
E 5 HOH A 14 415 415 HOH HOH . 
E 5 HOH A 15 416 416 HOH HOH . 
E 5 HOH A 16 417 417 HOH HOH . 
E 5 HOH A 17 418 418 HOH HOH . 
E 5 HOH A 18 419 419 HOH HOH . 
E 5 HOH A 19 420 420 HOH HOH . 
E 5 HOH A 20 421 421 HOH HOH . 
E 5 HOH A 21 422 422 HOH HOH . 
E 5 HOH A 22 423 423 HOH HOH . 
E 5 HOH A 23 424 424 HOH HOH . 
E 5 HOH A 24 425 425 HOH HOH . 
E 5 HOH A 25 426 426 HOH HOH . 
E 5 HOH A 26 427 427 HOH HOH . 
E 5 HOH A 27 428 428 HOH HOH . 
E 5 HOH A 28 429 429 HOH HOH . 
E 5 HOH A 29 430 430 HOH HOH . 
E 5 HOH A 30 431 431 HOH HOH . 
E 5 HOH A 31 432 432 HOH HOH . 
E 5 HOH A 32 433 433 HOH HOH . 
E 5 HOH A 33 434 434 HOH HOH . 
E 5 HOH A 34 435 435 HOH HOH . 
E 5 HOH A 35 436 436 HOH HOH . 
E 5 HOH A 36 437 437 HOH HOH . 
E 5 HOH A 37 438 438 HOH HOH . 
E 5 HOH A 38 439 439 HOH HOH . 
E 5 HOH A 39 440 440 HOH HOH . 
E 5 HOH A 40 441 441 HOH HOH . 
E 5 HOH A 41 442 442 HOH HOH . 
E 5 HOH A 42 443 443 HOH HOH . 
E 5 HOH A 43 444 444 HOH HOH . 
E 5 HOH A 44 445 445 HOH HOH . 
E 5 HOH A 45 446 446 HOH HOH . 
E 5 HOH A 46 447 447 HOH HOH . 
E 5 HOH A 47 448 448 HOH HOH . 
E 5 HOH A 48 449 449 HOH HOH . 
E 5 HOH A 49 450 450 HOH HOH . 
E 5 HOH A 50 451 451 HOH HOH . 
E 5 HOH A 51 452 452 HOH HOH . 
E 5 HOH A 52 453 453 HOH HOH . 
E 5 HOH A 53 454 454 HOH HOH . 
E 5 HOH A 54 455 455 HOH HOH . 
E 5 HOH A 55 456 456 HOH HOH . 
E 5 HOH A 56 457 457 HOH HOH . 
E 5 HOH A 57 458 458 HOH HOH . 
E 5 HOH A 58 459 459 HOH HOH . 
E 5 HOH A 59 460 460 HOH HOH . 
E 5 HOH A 60 461 461 HOH HOH . 
E 5 HOH A 61 462 462 HOH HOH . 
E 5 HOH A 62 463 463 HOH HOH . 
E 5 HOH A 63 464 464 HOH HOH . 
E 5 HOH A 64 465 465 HOH HOH . 
E 5 HOH A 65 466 466 HOH HOH . 
E 5 HOH A 66 467 467 HOH HOH . 
E 5 HOH A 67 468 468 HOH HOH . 
E 5 HOH A 68 470 470 HOH HOH . 
E 5 HOH A 69 471 471 HOH HOH . 
E 5 HOH A 70 472 472 HOH HOH . 
E 5 HOH A 71 473 473 HOH HOH . 
E 5 HOH A 72 474 474 HOH HOH . 
E 5 HOH A 73 475 475 HOH HOH . 
E 5 HOH A 74 476 476 HOH HOH . 
E 5 HOH A 75 477 477 HOH HOH . 
E 5 HOH A 76 478 478 HOH HOH . 
E 5 HOH A 77 479 479 HOH HOH . 
E 5 HOH A 78 480 480 HOH HOH . 
E 5 HOH A 79 481 481 HOH HOH . 
E 5 HOH A 80 482 482 HOH HOH . 
E 5 HOH A 81 483 483 HOH HOH . 
E 5 HOH A 82 484 484 HOH HOH . 
E 5 HOH A 83 485 485 HOH HOH . 
E 5 HOH A 84 486 486 HOH HOH . 
E 5 HOH A 85 487 487 HOH HOH . 
E 5 HOH A 86 488 488 HOH HOH . 
E 5 HOH A 87 489 489 HOH HOH . 
E 5 HOH A 88 491 491 HOH HOH . 
E 5 HOH A 89 492 492 HOH HOH . 
E 5 HOH A 90 493 493 HOH HOH . 
E 5 HOH A 91 494 494 HOH HOH . 
E 5 HOH A 92 495 495 HOH HOH . 
E 5 HOH A 93 496 496 HOH HOH . 
E 5 HOH A 94 497 497 HOH HOH . 
E 5 HOH A 95 498 498 HOH HOH . 
E 5 HOH A 96 499 499 HOH HOH . 
E 5 HOH A 97 500 500 HOH HOH . 
E 5 HOH A 98 501 501 HOH HOH . 
E 5 HOH A 99 502 502 HOH HOH . 
E 5 HOH A 100 503 503 HOH HOH . 
E 5 HOH A 101 504 504 HOH HOH . 
E 5 HOH A 102 505 505 HOH HOH . 
E 5 HOH A 103 506 506 HOH HOH . 
E 5 HOH A 104 507 507 HOH HOH . 
E 5 HOH A 105 508 508 HOH HOH . 
E 5 HOH A 106 509 509 HOH HOH . 
E 5 HOH A 107 510 510 HOH HOH . 
E 5 HOH A 108 511 511 HOH HOH . 
E 5 HOH A 109 512 512 HOH HOH . 
E 5 HOH A 110 513 513 HOH HOH . 
E 5 HOH A 111 514 514 HOH HOH . 
E 5 HOH A 112 515 515 HOH HOH . 
E 5 HOH A 113 516 516 HOH HOH . 
E 5 HOH A 114 517 517 HOH HOH . 
E 5 HOH A 115 518 518 HOH HOH . 
E 5 HOH A 116 519 519 HOH HOH . 
E 5 HOH A 117 520 520 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 MES . . . D 4 72.199 33.825 53.637 0.92 52.76 ? O1 MES 700 A 1 
HETATM 2 C C2 MES . . . D 4 70.899 33.873 53.003 0.92 52.46 ? C2 MES 700 A 1 
HETATM 3 C C3 MES . . . D 4 70.551 35.351 52.708 0.92 51.35 ? C3 MES 700 A 1 
HETATM 4 N N4 MES . . . D 4 70.45 36.089 54.047 0.92 51.14 ? N4 MES 700 A 1 
HETATM 5 C C5 MES . . . D 4 71.795 35.98 54.778 0.92 52.63 ? C5 MES 700 A 1 
HETATM 6 C C6 MES . . . D 4 72.177 34.497 54.941 0.92 52.72 ? C6 MES 700 A 1 
HETATM 7 C C7 MES . . . D 4 70.113 37.563 53.899 0.92 50.35 ? C7 MES 700 A 1 
HETATM 8 C C8 MES . . . D 4 68.643 37.776 53.559 0.92 48.54 ? C8 MES 700 A 1 
HETATM 9 S S MES . . . D 4 68.282 39.515 53.397 0.92 48.94 ? S MES 700 A 1 
HETATM 10 O O1S MES . . . D 4 68.607 40.165 54.677 0.92 47.3 ? O1S MES 700 A 1 
HETATM 11 O O2S MES . . . D 4 66.856 39.608 53.071 0.92 47.95 ? O2S MES 700 A 1 
HETATM 12 O O3S MES . . . D 4 69.133 40.011 52.321 0.92 48.38 ? O3S MES 700 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#