data_1R2C # _model_server_result.job_id eep33HbgpOfMtIH1yf1tuQ _model_server_result.datetime_utc '2024-11-13 08:04:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1r2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":705}' # _entry.id 1R2C # _exptl.entry_id 1R2C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1R2C _cell.length_a 223.5 _cell.length_b 223.5 _cell.length_c 112.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -56.25 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 M N N ? 9 W N N ? 9 X N N ? 9 Y N N ? 9 Z N N ? 9 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 87 C CYS 87 1_555 E CAB HEM . C HEM 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? covale ? covale2 A SG CYS 90 C CYS 90 1_555 E CAC HEM . C HEM 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? covale ? covale3 A SG CYS 132 C CYS 132 1_555 F CAB HEM . C HEM 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? covale ? covale4 A SG CYS 135 C CYS 135 1_555 F CAC HEM . C HEM 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? covale ? covale5 A SG CYS 244 C CYS 244 1_555 G CAB HEM . C HEM 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? covale ? covale6 A SG CYS 247 C CYS 247 1_555 G CAC HEM . C HEM 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.794 ? covale ? covale7 A SG CYS 305 C CYS 305 1_555 H CAB HEM . C HEM 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? covale ? covale8 A SG CYS 308 C CYS 308 1_555 H CAC HEM . C HEM 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? covale ? covale9 D C FME 1 H FME 1 1_555 D N TYR 2 H TYR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A SD MET 74 C MET 74 1_555 E FE HEM . C HEM 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc2 A NE2 HIS 91 C HIS 91 1_555 E FE HEM . C HEM 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc3 A SD MET 110 C MET 110 1_555 F FE HEM . C HEM 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 A NE2 HIS 124 C HIS 124 1_555 H FE HEM . C HEM 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc5 A NE2 HIS 136 C HIS 136 1_555 F FE HEM . C HEM 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc6 A SD MET 233 C MET 233 1_555 G FE HEM . C HEM 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc7 A NE2 HIS 248 C HIS 248 1_555 G FE HEM . C HEM 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 A NE2 HIS 309 C HIS 309 1_555 H FE HEM . C HEM 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc9 B NE2 HIS 153 L HIS 153 1_555 J MG BCB . L BCB 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc10 B NE2 HIS 173 L HIS 173 1_555 I MG BCB . L BCB 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc11 B NE2 HIS 190 L HIS 190 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc12 B NE2 HIS 230 L HIS 230 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc13 C NE2 HIS 180 M HIS 180 1_555 R MG BCB . M BCB 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc14 C NE2 HIS 200 M HIS 200 1_555 S MG BCB . M BCB 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc15 C NE2 HIS 217 M HIS 217 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc16 C CD GLU 232 M GLU 232 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc17 C OE1 GLU 232 M GLU 232 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc18 C OE2 GLU 232 M GLU 232 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc19 C NE2 HIS 264 M HIS 264 1_555 N FE FE2 . M FE2 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 564 n n N1 CM1 LDA sing 565 n n N1 CM2 LDA sing 566 n n N1 C1 LDA sing 567 n n CM1 HM11 LDA sing 568 n n CM1 HM12 LDA sing 569 n n CM1 HM13 LDA sing 570 n n CM2 HM21 LDA sing 571 n n CM2 HM22 LDA sing 572 n n CM2 HM23 LDA sing 573 n n C1 C2 LDA sing 574 n n C1 H11 LDA sing 575 n n C1 H12 LDA sing 576 n n C2 C3 LDA sing 577 n n C2 H21 LDA sing 578 n n C2 H22 LDA sing 579 n n C3 C4 LDA sing 580 n n C3 H31 LDA sing 581 n n C3 H32 LDA sing 582 n n C4 C5 LDA sing 583 n n C4 H41 LDA sing 584 n n C4 H42 LDA sing 585 n n C5 C6 LDA sing 586 n n C5 H51 LDA sing 587 n n C5 H52 LDA sing 588 n n C6 C7 LDA sing 589 n n C6 H61 LDA sing 590 n n C6 H62 LDA sing 591 n n C7 C8 LDA sing 592 n n C7 H71 LDA sing 593 n n C7 H72 LDA sing 594 n n C8 C9 LDA sing 595 n n C8 H81 LDA sing 596 n n C8 H82 LDA sing 597 n n C9 C10 LDA sing 598 n n C9 H91 LDA sing 599 n n C9 H92 LDA sing 600 n n C10 C11 LDA sing 601 n n C10 H101 LDA sing 602 n n C10 H102 LDA sing 603 n n C11 C12 LDA sing 604 n n C11 H111 LDA sing 605 n n C11 H112 LDA sing 606 n n C12 H121 LDA sing 607 n n C12 H122 LDA sing 608 n n C12 H123 LDA sing 609 n n # _atom_sites.entry_id 1R2C _atom_sites.fract_transf_matrix[1][1] 0.004474 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HEM C 1 1201 1201 HEM HEM . F 5 HEM C 1 1202 1202 HEM HEM . G 5 HEM C 1 1203 1203 HEM HEM . H 5 HEM C 1 1204 1204 HEM HEM . I 6 BCB L 1 302 302 BCB BCB . J 6 BCB L 1 304 304 BCB BCB . K 7 BPB L 1 402 402 BPB BPB . L 8 UQ2 L 1 502 502 UQ2 UQ2 . M 9 LDA L 1 705 705 LDA LDA . N 10 FE2 M 1 500 500 FE2 FE2 . O 11 SO4 M 1 802 802 SO4 SO4 . P 11 SO4 M 1 803 803 SO4 SO4 . Q 11 SO4 M 1 804 804 SO4 SO4 . R 6 BCB M 1 1301 1301 BCB BCB . S 6 BCB M 1 1303 1303 BCB BCB . T 7 BPB M 1 401 401 BPB BPB . U 12 MQ7 M 1 501 501 MQ7 7MQ . V 13 NS5 M 1 600 600 NS5 NS5 . W 9 LDA M 1 701 701 LDA LDA . X 9 LDA M 1 702 702 LDA LDA . Y 9 LDA M 1 704 704 LDA LDA . Z 9 LDA M 1 706 706 LDA LDA . AA 11 SO4 H 1 801 801 SO4 SO4 . BA 9 LDA H 1 703 703 LDA LDA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . M 9 25.023 -11.964 -22.589 1 94.08 ? N1 LDA 705 L 1 HETATM 2 O O1 LDA . . . M 9 24.193 -11.242 -23.167 1 95.03 ? O1 LDA 705 L 1 HETATM 3 C CM1 LDA . . . M 9 24.348 -13.008 -21.818 1 93.95 ? CM1 LDA 705 L 1 HETATM 4 C CM2 LDA . . . M 9 25.893 -12.624 -23.557 1 94.61 ? CM2 LDA 705 L 1 HETATM 5 C C1 LDA . . . M 9 25.826 -11.159 -21.678 0 91.03 ? C1 LDA 705 L 1 HETATM 6 C C2 LDA . . . M 9 26.794 -10.002 -21.918 1 86.21 ? C2 LDA 705 L 1 HETATM 7 C C3 LDA . . . M 9 28.053 -10.475 -22.62 1 83.6 ? C3 LDA 705 L 1 HETATM 8 C C4 LDA . . . M 9 29.134 -9.405 -22.662 1 80.42 ? C4 LDA 705 L 1 HETATM 9 C C5 LDA . . . M 9 30.46 -10.056 -23.01 1 78.26 ? C5 LDA 705 L 1 HETATM 10 C C6 LDA . . . M 9 31.626 -9.085 -23.002 1 75.21 ? C6 LDA 705 L 1 HETATM 11 C C7 LDA . . . M 9 32.923 -9.866 -23.17 1 73.6 ? C7 LDA 705 L 1 HETATM 12 C C8 LDA . . . M 9 34.145 -8.976 -23.344 1 72.05 ? C8 LDA 705 L 1 HETATM 13 C C9 LDA . . . M 9 35.397 -9.827 -23.527 1 71.32 ? C9 LDA 705 L 1 HETATM 14 C C10 LDA . . . M 9 36.6 -8.995 -23.945 1 71.43 ? C10 LDA 705 L 1 HETATM 15 C C11 LDA . . . M 9 37.828 -9.866 -24.151 0 71.16 ? C11 LDA 705 L 1 HETATM 16 C C12 LDA . . . M 9 39.012 -9.035 -24.593 0 71.08 ? C12 LDA 705 L 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #