data_1R3U # _model_server_result.job_id 6NktXuOk-5XhkRgZzjCH9Q _model_server_result.datetime_utc '2024-10-20 03:56:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1r3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1190}' # _entry.id 1R3U # _exptl.entry_id 1R3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1R3U _cell.length_a 68.02 _cell.length_b 139.51 _cell.length_c 97.32 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_756 -x+2,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 136.04 0 145.98 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 125 A GLU 101 1_555 C MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc2 A OE2 GLU 125 A GLU 101 1_555 C MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 A OD1 ASP 126 A ASP 102 1_555 C MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc4 C MG MG . A MG 190 1_555 F O HOH . A HOH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc5 C MG MG . A MG 190 1_555 F O HOH . A HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc6 C MG MG . A MG 190 1_555 F O HOH . A HOH 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc7 C MG MG . A MG 190 1_555 F O HOH . A HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc8 B OE2 GLU 125 B GLU 101 1_555 D MG MG . B MG 1190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc9 B OE1 GLU 125 B GLU 101 1_555 D MG MG . B MG 1190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc10 B OD1 ASP 126 B ASP 102 1_555 D MG MG . B MG 1190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc11 D MG MG . B MG 1190 1_555 G O HOH . B HOH 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc12 D MG MG . B MG 1190 1_555 G O HOH . B HOH 1237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? metalc ? metalc13 D MG MG . B MG 1190 1_555 G O HOH . B HOH 1261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1R3U _atom_sites.fract_transf_matrix[1][1] 0.014702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 190 190 MG MG2 . D 2 MG B 1 1190 190 MG MG2 . E 3 ACT B 1 200 200 ACT ACT . F 4 HOH A 1 191 2 HOH TIP . F 4 HOH A 2 192 4 HOH TIP . F 4 HOH A 3 193 7 HOH TIP . F 4 HOH A 4 194 10 HOH TIP . F 4 HOH A 5 195 11 HOH TIP . F 4 HOH A 6 196 12 HOH TIP . F 4 HOH A 7 197 14 HOH TIP . F 4 HOH A 8 198 16 HOH TIP . F 4 HOH A 9 199 17 HOH TIP . F 4 HOH A 10 200 20 HOH TIP . F 4 HOH A 11 201 24 HOH TIP . F 4 HOH A 12 202 25 HOH TIP . F 4 HOH A 13 203 31 HOH TIP . F 4 HOH A 14 204 38 HOH TIP . F 4 HOH A 15 205 39 HOH TIP . F 4 HOH A 16 206 41 HOH TIP . F 4 HOH A 17 207 42 HOH TIP . F 4 HOH A 18 208 43 HOH TIP . F 4 HOH A 19 209 44 HOH TIP . F 4 HOH A 20 210 46 HOH TIP . F 4 HOH A 21 211 48 HOH TIP . F 4 HOH A 22 212 49 HOH TIP . F 4 HOH A 23 213 53 HOH TIP . F 4 HOH A 24 214 54 HOH TIP . F 4 HOH A 25 215 55 HOH TIP . F 4 HOH A 26 216 60 HOH TIP . F 4 HOH A 27 217 67 HOH TIP . F 4 HOH A 28 218 71 HOH TIP . F 4 HOH A 29 219 72 HOH TIP . F 4 HOH A 30 220 73 HOH TIP . F 4 HOH A 31 221 77 HOH TIP . F 4 HOH A 32 222 78 HOH TIP . F 4 HOH A 33 223 80 HOH TIP . F 4 HOH A 34 224 84 HOH TIP . F 4 HOH A 35 225 87 HOH TIP . F 4 HOH A 36 226 94 HOH TIP . F 4 HOH A 37 227 96 HOH TIP . F 4 HOH A 38 228 97 HOH TIP . F 4 HOH A 39 229 102 HOH TIP . F 4 HOH A 40 230 103 HOH TIP . F 4 HOH A 41 231 107 HOH TIP . F 4 HOH A 42 232 110 HOH TIP . F 4 HOH A 43 233 112 HOH TIP . F 4 HOH A 44 234 114 HOH TIP . F 4 HOH A 45 235 115 HOH TIP . F 4 HOH A 46 236 116 HOH TIP . F 4 HOH A 47 237 118 HOH TIP . F 4 HOH A 48 238 119 HOH TIP . F 4 HOH A 49 239 120 HOH TIP . F 4 HOH A 50 240 122 HOH TIP . F 4 HOH A 51 241 128 HOH TIP . F 4 HOH A 52 242 129 HOH TIP . F 4 HOH A 53 243 131 HOH TIP . F 4 HOH A 54 244 134 HOH TIP . F 4 HOH A 55 245 135 HOH TIP . F 4 HOH A 56 246 136 HOH TIP . F 4 HOH A 57 247 139 HOH TIP . F 4 HOH A 58 248 140 HOH TIP . G 4 HOH B 1 1191 1 HOH TIP . G 4 HOH B 2 1192 3 HOH TIP . G 4 HOH B 3 1193 5 HOH TIP . G 4 HOH B 4 1194 6 HOH TIP . G 4 HOH B 5 1195 8 HOH TIP . G 4 HOH B 6 1196 9 HOH TIP . G 4 HOH B 7 1197 13 HOH TIP . G 4 HOH B 8 1198 15 HOH TIP . G 4 HOH B 9 1199 18 HOH TIP . G 4 HOH B 10 1200 19 HOH TIP . G 4 HOH B 11 1201 21 HOH TIP . G 4 HOH B 12 1202 22 HOH TIP . G 4 HOH B 13 1203 23 HOH TIP . G 4 HOH B 14 1204 26 HOH TIP . G 4 HOH B 15 1205 27 HOH TIP . G 4 HOH B 16 1206 28 HOH TIP . G 4 HOH B 17 1207 29 HOH TIP . G 4 HOH B 18 1208 30 HOH TIP . G 4 HOH B 19 1209 32 HOH TIP . G 4 HOH B 20 1210 33 HOH TIP . G 4 HOH B 21 1211 34 HOH TIP . G 4 HOH B 22 1212 35 HOH TIP . G 4 HOH B 23 1213 36 HOH TIP . G 4 HOH B 24 1214 37 HOH TIP . G 4 HOH B 25 1215 40 HOH TIP . G 4 HOH B 26 1216 45 HOH TIP . G 4 HOH B 27 1217 47 HOH TIP . G 4 HOH B 28 1218 50 HOH TIP . G 4 HOH B 29 1219 51 HOH TIP . G 4 HOH B 30 1220 52 HOH TIP . G 4 HOH B 31 1221 56 HOH TIP . G 4 HOH B 32 1222 57 HOH TIP . G 4 HOH B 33 1223 58 HOH TIP . G 4 HOH B 34 1224 59 HOH TIP . G 4 HOH B 35 1225 61 HOH TIP . G 4 HOH B 36 1226 62 HOH TIP . G 4 HOH B 37 1227 63 HOH TIP . G 4 HOH B 38 1228 64 HOH TIP . G 4 HOH B 39 1229 65 HOH TIP . G 4 HOH B 40 1230 66 HOH TIP . G 4 HOH B 41 1231 68 HOH TIP . G 4 HOH B 42 1232 69 HOH TIP . G 4 HOH B 43 1233 70 HOH TIP . G 4 HOH B 44 1234 74 HOH TIP . G 4 HOH B 45 1235 75 HOH TIP . G 4 HOH B 46 1236 76 HOH TIP . G 4 HOH B 47 1237 79 HOH TIP . G 4 HOH B 48 1238 81 HOH TIP . G 4 HOH B 49 1239 82 HOH TIP . G 4 HOH B 50 1240 83 HOH TIP . G 4 HOH B 51 1241 85 HOH TIP . G 4 HOH B 52 1242 86 HOH TIP . G 4 HOH B 53 1243 88 HOH TIP . G 4 HOH B 54 1244 89 HOH TIP . G 4 HOH B 55 1245 90 HOH TIP . G 4 HOH B 56 1246 91 HOH TIP . G 4 HOH B 57 1247 92 HOH TIP . G 4 HOH B 58 1248 93 HOH TIP . G 4 HOH B 59 1249 95 HOH TIP . G 4 HOH B 60 1250 98 HOH TIP . G 4 HOH B 61 1251 99 HOH TIP . G 4 HOH B 62 1252 100 HOH TIP . G 4 HOH B 63 1253 101 HOH TIP . G 4 HOH B 64 1254 104 HOH TIP . G 4 HOH B 65 1255 105 HOH TIP . G 4 HOH B 66 1256 106 HOH TIP . G 4 HOH B 67 1257 108 HOH TIP . G 4 HOH B 68 1258 109 HOH TIP . G 4 HOH B 69 1259 111 HOH TIP . G 4 HOH B 70 1260 113 HOH TIP . G 4 HOH B 71 1261 117 HOH TIP . G 4 HOH B 72 1262 121 HOH TIP . G 4 HOH B 73 1263 123 HOH TIP . G 4 HOH B 74 1264 124 HOH TIP . G 4 HOH B 75 1265 125 HOH TIP . G 4 HOH B 76 1266 126 HOH TIP . G 4 HOH B 77 1267 127 HOH TIP . G 4 HOH B 78 1268 130 HOH TIP . G 4 HOH B 79 1269 132 HOH TIP . G 4 HOH B 80 1270 133 HOH TIP . G 4 HOH B 81 1271 137 HOH TIP . G 4 HOH B 82 1272 138 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 58.574 _atom_site.Cartn_y -131.192 _atom_site.Cartn_z 65.409 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1190 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 61 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #