data_1R43 # _model_server_result.job_id gzxVNUXsGVxsPN9F2b1xkQ _model_server_result.datetime_utc '2024-11-12 21:11:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1r43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":505}' # _entry.id 1R43 # _exptl.entry_id 1R43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.112 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BETA-AMINO ISOBUTYRATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.63 _cell.angle_gamma 90 _cell.entry_id 1R43 _cell.length_a 60.43 _cell.length_b 77.63 _cell.length_c 110.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 60 A GLY 60 1_555 A N MSE 61 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 61 A MSE 61 1_555 A N ARG 62 A ARG 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ALA 72 A ALA 72 1_555 A N MSE 73 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 73 A MSE 73 1_555 A N ARG 74 A ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C ASN 95 A ASN 95 1_555 A N MSE 96 A MSE 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C MSE 96 A MSE 96 1_555 A N PHE 97 A PHE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A SG CYS 168 A CYS 168 1_555 E S1 DTT . A DTT 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? covale ? covale8 A C LEU 186 A LEU 186 1_555 A N MSE 187 A MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale9 A C MSE 187 A MSE 187 1_555 A N SER 188 A SER 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 A C LEU 276 A LEU 276 1_555 A N MSE 277 A MSE 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 A C MSE 277 A MSE 277 1_555 A N SER 278 A SER 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 A C LYS 280 A LYS 280 1_555 A N MSE 281 A MSE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 A C MSE 281 A MSE 281 1_555 A N ILE 282 A ILE 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale14 A C THR 331 A THR 331 1_555 A N MSE 332 A MSE 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 A C MSE 332 A MSE 332 1_555 A N LEU 333 A LEU 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale16 A C SER 409 A SER 409 1_555 A N MSE 410 A MSE 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale17 A C MSE 410 A MSE 410 1_555 A N ILE 411 A ILE 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale18 B C GLY 60 B GLY 60 1_555 B N MSE 61 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale19 B C MSE 61 B MSE 61 1_555 B N ARG 62 B ARG 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 B C ALA 72 B ALA 72 1_555 B N MSE 73 B MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale21 B C MSE 73 B MSE 73 1_555 B N ARG 74 B ARG 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale22 B C ASN 95 B ASN 95 1_555 B N MSE 96 B MSE 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 B C MSE 96 B MSE 96 1_555 B N PHE 97 B PHE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale24 B C LEU 186 B LEU 186 1_555 B N MSE 187 B MSE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 B C MSE 187 B MSE 187 1_555 B N SER 188 B SER 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale26 B C LEU 276 B LEU 276 1_555 B N MSE 277 B MSE 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale27 B C MSE 277 B MSE 277 1_555 B N SER 278 B SER 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale28 B C LYS 280 B LYS 280 1_555 B N MSE 281 B MSE 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 B C MSE 281 B MSE 281 1_555 B N ILE 282 B ILE 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 B C THR 331 B THR 331 1_555 B N MSE 332 B MSE 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale31 B C MSE 332 B MSE 332 1_555 B N LEU 333 B LEU 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale32 B C SER 409 B SER 409 1_555 B N MSE 410 B MSE 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale33 B C MSE 410 B MSE 410 1_555 B N ILE 411 B ILE 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A NE2 HIS 114 A HIS 114 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 A OD2 ASP 125 A ASP 125 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc3 A OD1 ASP 125 A ASP 125 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc4 A OE2 GLU 160 A GLU 160 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc5 A OE1 GLU 160 A GLU 160 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc6 A NE2 HIS 226 A HIS 226 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc7 A NE2 HIS 421 A HIS 421 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc8 C ZN ZN . A ZN 500 1_555 K O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc9 C ZN ZN . A ZN 500 1_555 K O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc10 D ZN ZN . A ZN 501 1_555 K O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc11 B NE2 HIS 114 B HIS 114 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc12 B OD1 ASP 125 B ASP 125 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc13 B OD2 ASP 125 B ASP 125 1_555 I ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc14 B OE1 GLU 159 B GLU 159 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc15 B OE2 GLU 160 B GLU 160 1_555 I ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc16 B NE2 HIS 226 B HIS 226 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc17 B NE2 HIS 421 B HIS 421 1_555 I ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc18 H ZN ZN . B ZN 500 1_555 L O HOH . B HOH 1512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc19 H ZN ZN . B ZN 500 1_555 L O HOH . B HOH 1519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? metalc ? metalc20 I ZN ZN . B ZN 501 1_555 L O HOH . B HOH 1519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? # _chem_comp.formula 'C4 H8 N O2 -1' _chem_comp.formula_weight 102.112 _chem_comp.id BIB _chem_comp.mon_nstd_flag . _chem_comp.name 'BETA-AMINO ISOBUTYRATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C5 BIB sing 70 n n C5 O6 BIB doub 71 n n C5 C3 BIB sing 72 n n C3 C2 BIB sing 73 n n C3 C4 BIB sing 74 n n C3 H3 BIB sing 75 n n C2 H21 BIB sing 76 n n C2 H22 BIB sing 77 n n C2 H23 BIB sing 78 n n C4 N1 BIB sing 79 n n C4 H41 BIB sing 80 n n C4 H42 BIB sing 81 n n N1 HN11 BIB sing 82 n n N1 HN12 BIB sing 83 n n # _atom_sites.entry_id 1R43 _atom_sites.fract_transf_matrix[1][1] 0.016548 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001631 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009088 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 500 500 ZN ZN . D 2 ZN A 1 501 501 ZN ZN . E 3 DTT A 1 503 503 DTT DTT . F 4 TRS A 1 504 504 TRS TRS . G 5 BIB A 1 505 505 BIB BIB . H 2 ZN B 1 500 500 ZN ZN . I 2 ZN B 1 501 501 ZN ZN . J 5 BIB B 1 1505 505 BIB BIB . K 6 HOH A 1 506 1 HOH HOH . K 6 HOH A 2 507 3 HOH HOH . K 6 HOH A 3 508 5 HOH HOH . K 6 HOH A 4 509 6 HOH HOH . K 6 HOH A 5 510 7 HOH HOH . K 6 HOH A 6 511 8 HOH HOH . K 6 HOH A 7 512 10 HOH HOH . K 6 HOH A 8 513 12 HOH HOH . K 6 HOH A 9 514 14 HOH HOH . K 6 HOH A 10 515 15 HOH HOH . K 6 HOH A 11 516 16 HOH HOH . K 6 HOH A 12 517 18 HOH HOH . K 6 HOH A 13 518 19 HOH HOH . K 6 HOH A 14 519 22 HOH HOH . K 6 HOH A 15 520 23 HOH HOH . K 6 HOH A 16 521 24 HOH HOH . K 6 HOH A 17 522 25 HOH HOH . K 6 HOH A 18 523 26 HOH HOH . K 6 HOH A 19 524 27 HOH HOH . K 6 HOH A 20 525 29 HOH HOH . K 6 HOH A 21 526 30 HOH HOH . K 6 HOH A 22 527 31 HOH HOH . K 6 HOH A 23 528 32 HOH HOH . K 6 HOH A 24 529 33 HOH HOH . K 6 HOH A 25 530 34 HOH HOH . K 6 HOH A 26 531 35 HOH HOH . K 6 HOH A 27 532 36 HOH HOH . K 6 HOH A 28 533 37 HOH HOH . K 6 HOH A 29 534 38 HOH HOH . K 6 HOH A 30 535 39 HOH HOH . K 6 HOH A 31 536 40 HOH HOH . K 6 HOH A 32 537 41 HOH HOH . K 6 HOH A 33 538 42 HOH HOH . K 6 HOH A 34 539 43 HOH HOH . K 6 HOH A 35 540 44 HOH HOH . K 6 HOH A 36 541 45 HOH HOH . K 6 HOH A 37 542 47 HOH HOH . K 6 HOH A 38 543 49 HOH HOH . K 6 HOH A 39 544 50 HOH HOH . K 6 HOH A 40 545 51 HOH HOH . K 6 HOH A 41 546 52 HOH HOH . K 6 HOH A 42 547 53 HOH HOH . K 6 HOH A 43 548 54 HOH HOH . K 6 HOH A 44 549 55 HOH HOH . K 6 HOH A 45 550 56 HOH HOH . K 6 HOH A 46 551 57 HOH HOH . K 6 HOH A 47 552 58 HOH HOH . K 6 HOH A 48 553 60 HOH HOH . K 6 HOH A 49 554 62 HOH HOH . K 6 HOH A 50 555 63 HOH HOH . K 6 HOH A 51 556 64 HOH HOH . K 6 HOH A 52 557 65 HOH HOH . K 6 HOH A 53 558 66 HOH HOH . K 6 HOH A 54 559 502 HOH HOH . L 6 HOH B 1 1506 2 HOH HOH . L 6 HOH B 2 1507 4 HOH HOH . L 6 HOH B 3 1508 9 HOH HOH . L 6 HOH B 4 1509 11 HOH HOH . L 6 HOH B 5 1510 13 HOH HOH . L 6 HOH B 6 1511 17 HOH HOH . L 6 HOH B 7 1512 20 HOH HOH . L 6 HOH B 8 1513 21 HOH HOH . L 6 HOH B 9 1514 28 HOH HOH . L 6 HOH B 10 1515 46 HOH HOH . L 6 HOH B 11 1516 48 HOH HOH . L 6 HOH B 12 1517 59 HOH HOH . L 6 HOH B 13 1518 61 HOH HOH . L 6 HOH B 14 1519 502 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7 BIB . . . G 5 29.952 6.548 6.087 1 18.81 ? O7 BIB 505 A 1 HETATM 2 C C5 BIB . . . G 5 30.209 7.464 6.903 1 18.09 ? C5 BIB 505 A 1 HETATM 3 O O6 BIB . . . G 5 29.799 7.417 8.086 1 15.67 ? O6 BIB 505 A 1 HETATM 4 C C3 BIB . . . G 5 31.038 8.647 6.444 1 18.21 ? C3 BIB 505 A 1 HETATM 5 C C2 BIB . . . G 5 32.467 8.205 6.115 1 17.74 ? C2 BIB 505 A 1 HETATM 6 C C4 BIB . . . G 5 30.381 9.315 5.231 1 18.36 ? C4 BIB 505 A 1 HETATM 7 N N1 BIB . . . G 5 30.394 10.765 5.358 1 18.03 ? N1 BIB 505 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #