data_1R4F
#
_model_server_result.job_id            ps4DbQKFyeUEP9q6bjIouQ 
_model_server_result.datetime_utc      '2024-12-01 03:13:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1r4f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":329}' 
#
_entry.id    1R4F 
#
_exptl.entry_id    1R4F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.291 
_cell.angle_gamma         90 
_cell.entry_id            1R4F 
_cell.length_a            51.996 
_cell.length_b            74.865 
_cell.length_c            81.369 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1R4F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 22 A ASP 10 1_555 C CA CA . A CA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc2 A OD1 ASP 27 A ASP 15 1_555 C CA CA . A CA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? 
metalc ? metalc3 A OD2 ASP 27 A ASP 15 1_555 C CA CA . A CA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? 
metalc ? metalc4 A O THR 149 A THR 137 1_555 C CA CA . A CA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
metalc ? metalc5 A OD2 ASP 273 A ASP 261 1_555 C CA CA . A CA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc6 C CA CA . A CA 328 1_555 F O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc7 C CA CA . A CA 328 1_555 F O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.108 ? 
metalc ? metalc8 C CA CA . A CA 328 1_555 F O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc9 B OD2 ASP 22 B ASP 10 1_555 D CA CA . B CA 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc10 B OD1 ASP 27 B ASP 15 1_555 D CA CA . B CA 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? 
metalc ? metalc11 B OD2 ASP 27 B ASP 15 1_555 D CA CA . B CA 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc12 B O THR 149 B THR 137 1_555 D CA CA . B CA 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc13 B OD2 ASP 273 B ASP 261 1_555 D CA CA . B CA 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
metalc ? metalc14 D CA CA . B CA 329 1_555 E O3' AD3 . B AD3 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc15 D CA CA . B CA 329 1_555 E O2' AD3 . B AD3 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? 
metalc ? metalc16 D CA CA . B CA 329 1_555 G O HOH . B HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1R4F 
_atom_sites.fract_transf_matrix[1][1]    0.019232 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00419 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013357 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012578 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 328 328 CA CA . 
D 2 CA B 1 329 328 CA CA . 
E 3 AD3 B 1 330 200 AD3 AD3 . 
F 4 HOH A 1 329 2 HOH HOH . 
F 4 HOH A 2 330 3 HOH HOH . 
F 4 HOH A 3 331 4 HOH HOH . 
F 4 HOH A 4 332 5 HOH HOH . 
F 4 HOH A 5 333 6 HOH HOH . 
F 4 HOH A 6 334 7 HOH HOH . 
F 4 HOH A 7 335 8 HOH HOH . 
F 4 HOH A 8 336 9 HOH HOH . 
F 4 HOH A 9 337 10 HOH HOH . 
F 4 HOH A 10 338 11 HOH HOH . 
F 4 HOH A 11 339 12 HOH HOH . 
F 4 HOH A 12 340 13 HOH HOH . 
F 4 HOH A 13 341 14 HOH HOH . 
F 4 HOH A 14 342 15 HOH HOH . 
F 4 HOH A 15 343 16 HOH HOH . 
F 4 HOH A 16 344 17 HOH HOH . 
F 4 HOH A 17 345 18 HOH HOH . 
F 4 HOH A 18 346 19 HOH HOH . 
F 4 HOH A 19 347 20 HOH HOH . 
F 4 HOH A 20 348 21 HOH HOH . 
F 4 HOH A 21 349 22 HOH HOH . 
F 4 HOH A 22 350 23 HOH HOH . 
F 4 HOH A 23 351 24 HOH HOH . 
F 4 HOH A 24 352 25 HOH HOH . 
F 4 HOH A 25 353 26 HOH HOH . 
F 4 HOH A 26 354 27 HOH HOH . 
F 4 HOH A 27 355 28 HOH HOH . 
F 4 HOH A 28 356 29 HOH HOH . 
F 4 HOH A 29 357 30 HOH HOH . 
F 4 HOH A 30 358 31 HOH HOH . 
F 4 HOH A 31 359 32 HOH HOH . 
F 4 HOH A 32 360 35 HOH HOH . 
F 4 HOH A 33 361 36 HOH HOH . 
F 4 HOH A 34 362 37 HOH HOH . 
F 4 HOH A 35 363 38 HOH HOH . 
F 4 HOH A 36 364 39 HOH HOH . 
F 4 HOH A 37 365 40 HOH HOH . 
F 4 HOH A 38 366 41 HOH HOH . 
F 4 HOH A 39 367 42 HOH HOH . 
F 4 HOH A 40 368 43 HOH HOH . 
F 4 HOH A 41 369 44 HOH HOH . 
F 4 HOH A 42 370 45 HOH HOH . 
F 4 HOH A 43 371 46 HOH HOH . 
F 4 HOH A 44 372 47 HOH HOH . 
F 4 HOH A 45 373 48 HOH HOH . 
F 4 HOH A 46 374 49 HOH HOH . 
F 4 HOH A 47 375 50 HOH HOH . 
F 4 HOH A 48 376 51 HOH HOH . 
F 4 HOH A 49 377 52 HOH HOH . 
F 4 HOH A 50 378 53 HOH HOH . 
F 4 HOH A 51 379 54 HOH HOH . 
F 4 HOH A 52 380 55 HOH HOH . 
F 4 HOH A 53 381 56 HOH HOH . 
F 4 HOH A 54 382 57 HOH HOH . 
F 4 HOH A 55 383 58 HOH HOH . 
F 4 HOH A 56 384 59 HOH HOH . 
F 4 HOH A 57 385 60 HOH HOH . 
F 4 HOH A 58 386 61 HOH HOH . 
F 4 HOH A 59 387 62 HOH HOH . 
F 4 HOH A 60 388 63 HOH HOH . 
F 4 HOH A 61 389 64 HOH HOH . 
F 4 HOH A 62 390 65 HOH HOH . 
F 4 HOH A 63 391 66 HOH HOH . 
F 4 HOH A 64 392 67 HOH HOH . 
F 4 HOH A 65 393 68 HOH HOH . 
F 4 HOH A 66 394 69 HOH HOH . 
F 4 HOH A 67 395 70 HOH HOH . 
F 4 HOH A 68 396 71 HOH HOH . 
F 4 HOH A 69 397 72 HOH HOH . 
F 4 HOH A 70 398 73 HOH HOH . 
F 4 HOH A 71 399 74 HOH HOH . 
F 4 HOH A 72 400 75 HOH HOH . 
F 4 HOH A 73 401 76 HOH HOH . 
F 4 HOH A 74 402 77 HOH HOH . 
F 4 HOH A 75 403 78 HOH HOH . 
F 4 HOH A 76 404 79 HOH HOH . 
F 4 HOH A 77 405 80 HOH HOH . 
F 4 HOH A 78 406 81 HOH HOH . 
F 4 HOH A 79 407 82 HOH HOH . 
F 4 HOH A 80 408 83 HOH HOH . 
F 4 HOH A 81 409 84 HOH HOH . 
F 4 HOH A 82 410 85 HOH HOH . 
F 4 HOH A 83 411 86 HOH HOH . 
F 4 HOH A 84 412 87 HOH HOH . 
F 4 HOH A 85 413 88 HOH HOH . 
F 4 HOH A 86 414 89 HOH HOH . 
F 4 HOH A 87 415 150 HOH HOH . 
F 4 HOH A 88 416 153 HOH HOH . 
G 4 HOH B 1 331 1 HOH HOH . 
G 4 HOH B 2 332 33 HOH HOH . 
G 4 HOH B 3 333 34 HOH HOH . 
G 4 HOH B 4 334 90 HOH HOH . 
G 4 HOH B 5 335 91 HOH HOH . 
G 4 HOH B 6 336 92 HOH HOH . 
G 4 HOH B 7 337 93 HOH HOH . 
G 4 HOH B 8 338 94 HOH HOH . 
G 4 HOH B 9 339 95 HOH HOH . 
G 4 HOH B 10 340 96 HOH HOH . 
G 4 HOH B 11 341 97 HOH HOH . 
G 4 HOH B 12 342 98 HOH HOH . 
G 4 HOH B 13 343 99 HOH HOH . 
G 4 HOH B 14 344 100 HOH HOH . 
G 4 HOH B 15 345 101 HOH HOH . 
G 4 HOH B 16 346 102 HOH HOH . 
G 4 HOH B 17 347 103 HOH HOH . 
G 4 HOH B 18 348 104 HOH HOH . 
G 4 HOH B 19 349 105 HOH HOH . 
G 4 HOH B 20 350 106 HOH HOH . 
G 4 HOH B 21 351 107 HOH HOH . 
G 4 HOH B 22 352 108 HOH HOH . 
G 4 HOH B 23 353 109 HOH HOH . 
G 4 HOH B 24 354 110 HOH HOH . 
G 4 HOH B 25 355 111 HOH HOH . 
G 4 HOH B 26 356 112 HOH HOH . 
G 4 HOH B 27 357 113 HOH HOH . 
G 4 HOH B 28 358 114 HOH HOH . 
G 4 HOH B 29 359 115 HOH HOH . 
G 4 HOH B 30 360 116 HOH HOH . 
G 4 HOH B 31 361 117 HOH HOH . 
G 4 HOH B 32 362 118 HOH HOH . 
G 4 HOH B 33 363 119 HOH HOH . 
G 4 HOH B 34 364 120 HOH HOH . 
G 4 HOH B 35 365 121 HOH HOH . 
G 4 HOH B 36 366 122 HOH HOH . 
G 4 HOH B 37 367 123 HOH HOH . 
G 4 HOH B 38 368 124 HOH HOH . 
G 4 HOH B 39 369 125 HOH HOH . 
G 4 HOH B 40 370 126 HOH HOH . 
G 4 HOH B 41 371 127 HOH HOH . 
G 4 HOH B 42 372 128 HOH HOH . 
G 4 HOH B 43 373 129 HOH HOH . 
G 4 HOH B 44 374 130 HOH HOH . 
G 4 HOH B 45 375 131 HOH HOH . 
G 4 HOH B 46 376 132 HOH HOH . 
G 4 HOH B 47 377 133 HOH HOH . 
G 4 HOH B 48 378 134 HOH HOH . 
G 4 HOH B 49 379 135 HOH HOH . 
G 4 HOH B 50 380 136 HOH HOH . 
G 4 HOH B 51 381 137 HOH HOH . 
G 4 HOH B 52 382 138 HOH HOH . 
G 4 HOH B 53 383 139 HOH HOH . 
G 4 HOH B 54 384 140 HOH HOH . 
G 4 HOH B 55 385 141 HOH HOH . 
G 4 HOH B 56 386 142 HOH HOH . 
G 4 HOH B 57 387 143 HOH HOH . 
G 4 HOH B 58 388 144 HOH HOH . 
G 4 HOH B 59 389 145 HOH HOH . 
G 4 HOH B 60 390 146 HOH HOH . 
G 4 HOH B 61 391 147 HOH HOH . 
G 4 HOH B 62 392 148 HOH HOH . 
G 4 HOH B 63 393 149 HOH HOH . 
G 4 HOH B 64 394 151 HOH HOH . 
G 4 HOH B 65 395 152 HOH HOH . 
G 4 HOH B 66 396 154 HOH HOH . 
G 4 HOH B 67 397 155 HOH HOH . 
G 4 HOH B 68 398 156 HOH HOH . 
G 4 HOH B 69 399 157 HOH HOH . 
G 4 HOH B 70 400 158 HOH HOH . 
G 4 HOH B 71 401 159 HOH HOH . 
G 4 HOH B 72 402 160 HOH HOH . 
G 4 HOH B 73 403 161 HOH HOH . 
G 4 HOH B 74 404 162 HOH HOH . 
G 4 HOH B 75 405 163 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               29.78 
_atom_site.Cartn_y               28.215 
_atom_site.Cartn_z               39.867 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           329 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#