data_1R5I # _model_server_result.job_id NmHlFlcXDIEPhjYmejiqLA _model_server_result.datetime_utc '2024-11-22 16:56:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1r5i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":204}' # _entry.id 1R5I # _exptl.entry_id 1R5I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1R5I _cell.length_a 138.286 _cell.length_b 178.814 _cell.length_c 179.554 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R5I _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,M,N,O 1 1 E,F,G,H,K,L,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 107 A CYS 107 1_555 A SG CYS 163 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 B SG CYS 15 B CYS 15 1_555 B SG CYS 79 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf3 B SG CYS 117 B CYS 117 1_555 B SG CYS 173 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 E SG CYS 107 E CYS 107 1_555 E SG CYS 163 E CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 F SG CYS 15 F CYS 15 1_555 F SG CYS 79 F CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf6 F SG CYS 117 F CYS 117 1_555 F SG CYS 173 F CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A C PHE 22 A PHE 22 1_555 A N MSE 23 A MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 23 A MSE 23 1_555 A N PHE 24 A PHE 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C ASP 35 A ASP 35 1_555 A N MSE 36 A MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 36 A MSE 36 1_555 A N ALA 37 A ALA 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C ILE 72 A ILE 72 1_555 A N MSE 73 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C MSE 73 A MSE 73 1_555 A N THR 74 A THR 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 E C PHE 22 E PHE 22 1_555 E N MSE 23 E MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 E C MSE 23 E MSE 23 1_555 E N PHE 24 E PHE 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 E C ASP 35 E ASP 35 1_555 E N MSE 36 E MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 E C MSE 36 E MSE 36 1_555 E N ALA 37 E ALA 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale11 E C ILE 72 E ILE 72 1_555 E N MSE 73 E MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale12 E C MSE 73 E MSE 73 1_555 E N THR 74 E THR 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 279 n n P O2 PO4 sing 280 n n P O3 PO4 sing 281 n n P O4 PO4 sing 282 n n # _atom_sites.entry_id 1R5I _atom_sites.fract_transf_matrix[1][1] 0.007231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005592 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 PO4 C 1 202 2 PO4 PO4 . J 5 PO4 D 1 214 1 PO4 PO4 . K 5 PO4 E 1 204 4 PO4 PO4 . L 5 PO4 H 1 214 3 PO4 PO4 . M 6 HOH A 1 182 7 HOH H2O . M 6 HOH A 2 183 11 HOH H2O . M 6 HOH A 3 184 14 HOH H2O . M 6 HOH A 4 185 15 HOH H2O . M 6 HOH A 5 186 23 HOH H2O . M 6 HOH A 6 187 25 HOH H2O . M 6 HOH A 7 188 32 HOH H2O . M 6 HOH A 8 189 33 HOH H2O . M 6 HOH A 9 190 39 HOH H2O . M 6 HOH A 10 191 41 HOH H2O . M 6 HOH A 11 192 43 HOH H2O . M 6 HOH A 12 193 51 HOH H2O . M 6 HOH A 13 194 53 HOH H2O . M 6 HOH A 14 195 54 HOH H2O . M 6 HOH A 15 196 55 HOH H2O . M 6 HOH A 16 197 56 HOH H2O . M 6 HOH A 17 198 57 HOH H2O . M 6 HOH A 18 199 58 HOH H2O . M 6 HOH A 19 200 59 HOH H2O . M 6 HOH A 20 201 98 HOH H2O . M 6 HOH A 21 202 100 HOH H2O . M 6 HOH A 22 203 104 HOH H2O . M 6 HOH A 23 204 105 HOH H2O . N 6 HOH B 1 191 3 HOH H2O . N 6 HOH B 2 192 4 HOH H2O . N 6 HOH B 3 193 12 HOH H2O . N 6 HOH B 4 194 20 HOH H2O . N 6 HOH B 5 195 21 HOH H2O . N 6 HOH B 6 196 22 HOH H2O . N 6 HOH B 7 197 26 HOH H2O . N 6 HOH B 8 198 28 HOH H2O . N 6 HOH B 9 199 30 HOH H2O . N 6 HOH B 10 200 31 HOH H2O . N 6 HOH B 11 201 38 HOH H2O . N 6 HOH B 12 202 60 HOH H2O . N 6 HOH B 13 203 61 HOH H2O . N 6 HOH B 14 204 62 HOH H2O . N 6 HOH B 15 205 63 HOH H2O . N 6 HOH B 16 206 64 HOH H2O . N 6 HOH B 17 207 99 HOH H2O . N 6 HOH B 18 208 103 HOH H2O . O 6 HOH D 1 215 6 HOH H2O . O 6 HOH D 2 216 10 HOH H2O . O 6 HOH D 3 217 13 HOH H2O . O 6 HOH D 4 218 19 HOH H2O . O 6 HOH D 5 219 24 HOH H2O . O 6 HOH D 6 220 29 HOH H2O . O 6 HOH D 7 221 34 HOH H2O . O 6 HOH D 8 222 42 HOH H2O . O 6 HOH D 9 223 46 HOH H2O . O 6 HOH D 10 224 47 HOH H2O . O 6 HOH D 11 225 48 HOH H2O . O 6 HOH D 12 226 49 HOH H2O . O 6 HOH D 13 227 65 HOH H2O . O 6 HOH D 14 228 66 HOH H2O . O 6 HOH D 15 229 67 HOH H2O . O 6 HOH D 16 230 80 HOH H2O . O 6 HOH D 17 231 101 HOH H2O . P 6 HOH E 1 205 5 HOH H2O . P 6 HOH E 2 206 8 HOH H2O . P 6 HOH E 3 207 16 HOH H2O . P 6 HOH E 4 208 18 HOH H2O . P 6 HOH E 5 209 27 HOH H2O . P 6 HOH E 6 210 36 HOH H2O . P 6 HOH E 7 211 37 HOH H2O . P 6 HOH E 8 212 44 HOH H2O . P 6 HOH E 9 213 45 HOH H2O . P 6 HOH E 10 214 50 HOH H2O . P 6 HOH E 11 215 52 HOH H2O . P 6 HOH E 12 216 69 HOH H2O . P 6 HOH E 13 217 70 HOH H2O . P 6 HOH E 14 218 71 HOH H2O . P 6 HOH E 15 219 72 HOH H2O . P 6 HOH E 16 220 73 HOH H2O . P 6 HOH E 17 221 77 HOH H2O . P 6 HOH E 18 222 78 HOH H2O . P 6 HOH E 19 223 79 HOH H2O . P 6 HOH E 20 224 94 HOH H2O . P 6 HOH E 21 225 97 HOH H2O . P 6 HOH E 22 226 102 HOH H2O . P 6 HOH E 23 227 106 HOH H2O . Q 6 HOH F 1 191 17 HOH H2O . Q 6 HOH F 2 192 35 HOH H2O . Q 6 HOH F 3 193 40 HOH H2O . Q 6 HOH F 4 194 74 HOH H2O . Q 6 HOH F 5 195 75 HOH H2O . Q 6 HOH F 6 196 76 HOH H2O . Q 6 HOH F 7 197 81 HOH H2O . Q 6 HOH F 8 198 82 HOH H2O . Q 6 HOH F 9 199 83 HOH H2O . Q 6 HOH F 10 200 84 HOH H2O . Q 6 HOH F 11 201 85 HOH H2O . Q 6 HOH F 12 202 86 HOH H2O . R 6 HOH H 1 215 1 HOH H2O . R 6 HOH H 2 216 2 HOH H2O . R 6 HOH H 3 217 9 HOH H2O . R 6 HOH H 4 218 68 HOH H2O . R 6 HOH H 5 219 87 HOH H2O . R 6 HOH H 6 220 88 HOH H2O . R 6 HOH H 7 221 89 HOH H2O . R 6 HOH H 8 222 90 HOH H2O . R 6 HOH H 9 223 91 HOH H2O . R 6 HOH H 10 224 92 HOH H2O . R 6 HOH H 11 225 93 HOH H2O . R 6 HOH H 12 226 95 HOH H2O . R 6 HOH H 13 227 96 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . K 5 49.297 -40.402 24.612 1 106.37 ? P PO4 204 E 1 HETATM 2 O O1 PO4 . . . K 5 49.115 -41.24 25.833 1 106.58 ? O1 PO4 204 E 1 HETATM 3 O O2 PO4 . . . K 5 48.033 -40.389 23.822 1 104.86 ? O2 PO4 204 E 1 HETATM 4 O O3 PO4 . . . K 5 49.644 -39.012 25.012 1 106.39 ? O3 PO4 204 E 1 HETATM 5 O O4 PO4 . . . K 5 50.395 -40.968 23.782 1 106.04 ? O4 PO4 204 E 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #