data_1R6A # _model_server_result.job_id FAcl1r123seixor8W1Aiqw _model_server_result.datetime_utc '2025-03-04 06:25:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1r6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":300}' # _entry.id 1R6A # _exptl.entry_id 1R6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 324.185 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'RIBAVIRIN MONOPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1R6A _cell.length_a 111.99 _cell.length_b 111.99 _cell.length_c 56.27 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K 1 1 A,B,C,D,E,F,G,H,I,J,K 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 18.756667 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H13 N4 O8 P' _chem_comp.formula_weight 324.185 _chem_comp.id RVP _chem_comp.mon_nstd_flag . _chem_comp.name 'RIBAVIRIN MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P RVP sing 277 n n P O2P RVP sing 278 n n P O3P RVP doub 279 n n P O5' RVP sing 280 n n O1P HOP1 RVP sing 281 n n O2P HOP2 RVP sing 282 n n O5' C5' RVP sing 283 n n C5' C4' RVP sing 284 n n C5' "H5'1" RVP sing 285 n n C5' "H5'2" RVP sing 286 n n C4' O4' RVP sing 287 n n C4' C3' RVP sing 288 n n C4' H4' RVP sing 289 n n O4' C1' RVP sing 290 n n C3' O3' RVP sing 291 n n C3' C2' RVP sing 292 n n C3' H3' RVP sing 293 n n O3' "HO'3" RVP sing 294 n n C2' O2' RVP sing 295 n n C2' C1' RVP sing 296 n n C2' H2' RVP sing 297 n n O2' "HO'2" RVP sing 298 n n C1' N9 RVP sing 299 n n C1' H1' RVP sing 300 n n N9 C8 RVP sing 301 n y N9 N4 RVP sing 302 n y C8 N7 RVP doub 303 n y C8 HC8 RVP sing 304 n n N7 C5 RVP sing 305 n y C5 C6 RVP sing 306 n n C5 N4 RVP doub 307 n y C6 O6 RVP doub 308 n n C6 N1 RVP sing 309 n n N1 HN1 RVP sing 310 n n N1 HN2 RVP sing 311 n n # _atom_sites.entry_id 1R6A _atom_sites.fract_transf_matrix[1][1] 0.008929 _atom_sites.fract_transf_matrix[1][2] 0.005155 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010311 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 901 901 SO4 SO4 . C 2 SO4 A 1 902 902 SO4 SO4 . D 2 SO4 A 1 903 903 SO4 SO4 . E 2 SO4 A 1 904 904 SO4 SO4 . F 2 SO4 A 1 905 905 SO4 SO4 . G 2 SO4 A 1 906 906 SO4 SO4 . H 2 SO4 A 1 907 907 SO4 SO4 . I 3 SAH A 1 887 887 SAH SAH . J 4 RVP A 1 300 300 RVP RVP . K 5 HOH A 1 908 1 HOH HOH . K 5 HOH A 2 909 2 HOH HOH . K 5 HOH A 3 910 3 HOH HOH . K 5 HOH A 4 911 4 HOH HOH . K 5 HOH A 5 912 5 HOH HOH . K 5 HOH A 6 913 6 HOH HOH . K 5 HOH A 7 914 7 HOH HOH . K 5 HOH A 8 915 8 HOH HOH . K 5 HOH A 9 916 9 HOH HOH . K 5 HOH A 10 917 10 HOH HOH . K 5 HOH A 11 918 11 HOH HOH . K 5 HOH A 12 919 12 HOH HOH . K 5 HOH A 13 920 13 HOH HOH . K 5 HOH A 14 921 14 HOH HOH . K 5 HOH A 15 922 15 HOH HOH . K 5 HOH A 16 923 16 HOH HOH . K 5 HOH A 17 924 17 HOH HOH . K 5 HOH A 18 925 18 HOH HOH . K 5 HOH A 19 926 19 HOH HOH . K 5 HOH A 20 927 20 HOH HOH . K 5 HOH A 21 928 21 HOH HOH . K 5 HOH A 22 929 22 HOH HOH . K 5 HOH A 23 930 23 HOH HOH . K 5 HOH A 24 931 24 HOH HOH . K 5 HOH A 25 932 25 HOH HOH . K 5 HOH A 26 933 26 HOH HOH . K 5 HOH A 27 934 27 HOH HOH . K 5 HOH A 28 935 28 HOH HOH . K 5 HOH A 29 936 29 HOH HOH . K 5 HOH A 30 937 30 HOH HOH . K 5 HOH A 31 938 31 HOH HOH . K 5 HOH A 32 939 32 HOH HOH . K 5 HOH A 33 940 33 HOH HOH . K 5 HOH A 34 941 34 HOH HOH . K 5 HOH A 35 942 35 HOH HOH . K 5 HOH A 36 943 36 HOH HOH . K 5 HOH A 37 944 37 HOH HOH . K 5 HOH A 38 945 38 HOH HOH . K 5 HOH A 39 946 39 HOH HOH . K 5 HOH A 40 947 40 HOH HOH . K 5 HOH A 41 948 41 HOH HOH . K 5 HOH A 42 949 42 HOH HOH . K 5 HOH A 43 950 43 HOH HOH . K 5 HOH A 44 951 44 HOH HOH . K 5 HOH A 45 952 45 HOH HOH . K 5 HOH A 46 953 46 HOH HOH . K 5 HOH A 47 954 47 HOH HOH . K 5 HOH A 48 955 48 HOH HOH . K 5 HOH A 49 956 49 HOH HOH . K 5 HOH A 50 957 50 HOH HOH . K 5 HOH A 51 958 51 HOH HOH . K 5 HOH A 52 959 52 HOH HOH . K 5 HOH A 53 960 53 HOH HOH . K 5 HOH A 54 961 54 HOH HOH . K 5 HOH A 55 962 55 HOH HOH . K 5 HOH A 56 963 56 HOH HOH . K 5 HOH A 57 964 57 HOH HOH . K 5 HOH A 58 965 58 HOH HOH . K 5 HOH A 59 966 59 HOH HOH . K 5 HOH A 60 967 60 HOH HOH . K 5 HOH A 61 968 61 HOH HOH . K 5 HOH A 62 969 62 HOH HOH . K 5 HOH A 63 970 63 HOH HOH . K 5 HOH A 64 971 64 HOH HOH . K 5 HOH A 65 972 65 HOH HOH . K 5 HOH A 66 973 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P RVP . . . J 4 15.948 -52.492 12.807 1 84.03 ? P RVP 300 A 1 HETATM 2 O O1P RVP . . . J 4 16.28 -51.797 11.292 1 84.84 ? O1P RVP 300 A 1 HETATM 3 O O2P RVP . . . J 4 15.329 -53.824 12.647 1 84.79 ? O2P RVP 300 A 1 HETATM 4 O O3P RVP . . . J 4 17.404 -52.39 13.446 1 82.98 ? O3P RVP 300 A 1 HETATM 5 O O5' RVP . . . J 4 14.887 -51.702 13.854 1 80.59 ? O5' RVP 300 A 1 HETATM 6 C C5' RVP . . . J 4 15.23 -50.333 14.19 1 77.86 ? C5' RVP 300 A 1 HETATM 7 C C4' RVP . . . J 4 14.93 -50.268 15.802 1 75.95 ? C4' RVP 300 A 1 HETATM 8 O O4' RVP . . . J 4 14.442 -51.336 16.709 1 76.2 ? O4' RVP 300 A 1 HETATM 9 C C3' RVP . . . J 4 16.076 -49.713 16.559 1 75.13 ? C3' RVP 300 A 1 HETATM 10 O O3' RVP . . . J 4 16.282 -48.343 16.287 1 76.81 ? O3' RVP 300 A 1 HETATM 11 C C2' RVP . . . J 4 15.847 -50.01 18.089 1 74.13 ? C2' RVP 300 A 1 HETATM 12 O O2' RVP . . . J 4 15.159 -49.07 18.763 1 72.51 ? O2' RVP 300 A 1 HETATM 13 C C1' RVP . . . J 4 15.142 -51.479 17.996 1 74.35 ? C1' RVP 300 A 1 HETATM 14 N N9 RVP . . . J 4 16.228 -52.668 18.09 1 74.28 ? N9 RVP 300 A 1 HETATM 15 C C8 RVP . . . J 4 17.186 -53.074 17.092 1 73.52 ? C8 RVP 300 A 1 HETATM 16 N N7 RVP . . . J 4 17.8 -54.122 17.763 1 72.16 ? N7 RVP 300 A 1 HETATM 17 C C5 RVP . . . J 4 17.313 -54.387 19.063 1 72.67 ? C5 RVP 300 A 1 HETATM 18 C C6 RVP . . . J 4 17.701 -55.312 19.935 1 71.93 ? C6 RVP 300 A 1 HETATM 19 O O6 RVP . . . J 4 18.553 -56.264 20.04 1 71.08 ? O6 RVP 300 A 1 HETATM 20 N N1 RVP . . . J 4 16.891 -55.267 21.275 1 71.07 ? N1 RVP 300 A 1 HETATM 21 N N4 RVP . . . J 4 16.327 -53.455 19.233 1 73.15 ? N4 RVP 300 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #