data_1RBE # _model_server_result.job_id JIukKVd3XtW9OcOuldyqfQ _model_server_result.datetime_utc '2024-12-21 15:56:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rbe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":125}' # _entry.id 1RBE # _exptl.entry_id 1RBE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RBE _cell.length_a 44.76 _cell.length_b 44.76 _cell.length_c 96.62 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RBE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 6 A CYS 26 1_555 B SG CYS 64 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 20 A CYS 40 1_555 B SG CYS 75 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? disulf ? disulf3 B SG CYS 38 A CYS 58 1_555 B SG CYS 90 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf4 B SG CYS 45 A CYS 65 1_555 B SG CYS 52 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 A C SER 15 S SER 15 1_555 A N NH2 16 S NH2 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 292 n n S O2 SO4 doub 293 n n S O3 SO4 sing 294 n n S O4 SO4 sing 295 n n # _atom_sites.entry_id 1RBE _atom_sites.fract_transf_matrix[1][1] 0.022341 _atom_sites.fract_transf_matrix[1][2] 0.012899 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01035 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 125 125 SO4 SO4 . D 4 HOH S 1 202 202 HOH HOH . D 4 HOH S 2 204 204 HOH HOH . D 4 HOH S 3 219 219 HOH HOH . D 4 HOH S 4 224 224 HOH HOH . D 4 HOH S 5 225 225 HOH HOH . D 4 HOH S 6 230 230 HOH HOH . D 4 HOH S 7 234 234 HOH HOH . D 4 HOH S 8 237 237 HOH HOH . D 4 HOH S 9 250 250 HOH HOH . D 4 HOH S 10 265 265 HOH HOH . D 4 HOH S 11 268 268 HOH HOH . D 4 HOH S 12 275 275 HOH HOH . D 4 HOH S 13 302 302 HOH HOH . D 4 HOH S 14 316 316 HOH HOH . D 4 HOH S 15 319 319 HOH HOH . E 4 HOH A 1 201 201 HOH HOH . E 4 HOH A 2 203 203 HOH HOH . E 4 HOH A 3 205 205 HOH HOH . E 4 HOH A 4 207 207 HOH HOH . E 4 HOH A 5 208 208 HOH HOH . E 4 HOH A 6 209 209 HOH HOH . E 4 HOH A 7 210 210 HOH HOH . E 4 HOH A 8 211 211 HOH HOH . E 4 HOH A 9 212 212 HOH HOH . E 4 HOH A 10 213 213 HOH HOH . E 4 HOH A 11 214 214 HOH HOH . E 4 HOH A 12 215 215 HOH HOH . E 4 HOH A 13 216 216 HOH HOH . E 4 HOH A 14 217 217 HOH HOH . E 4 HOH A 15 218 218 HOH HOH . E 4 HOH A 16 221 221 HOH HOH . E 4 HOH A 17 222 222 HOH HOH . E 4 HOH A 18 223 223 HOH HOH . E 4 HOH A 19 226 226 HOH HOH . E 4 HOH A 20 227 227 HOH HOH . E 4 HOH A 21 228 228 HOH HOH . E 4 HOH A 22 231 231 HOH HOH . E 4 HOH A 23 235 235 HOH HOH . E 4 HOH A 24 236 236 HOH HOH . E 4 HOH A 25 249 249 HOH HOH . E 4 HOH A 26 251 251 HOH HOH . E 4 HOH A 27 252 252 HOH HOH . E 4 HOH A 28 254 254 HOH HOH . E 4 HOH A 29 255 255 HOH HOH . E 4 HOH A 30 256 256 HOH HOH . E 4 HOH A 31 259 259 HOH HOH . E 4 HOH A 32 261 261 HOH HOH . E 4 HOH A 33 263 263 HOH HOH . E 4 HOH A 34 264 264 HOH HOH . E 4 HOH A 35 266 266 HOH HOH . E 4 HOH A 36 267 267 HOH HOH . E 4 HOH A 37 269 269 HOH HOH . E 4 HOH A 38 270 270 HOH HOH . E 4 HOH A 39 272 272 HOH HOH . E 4 HOH A 40 276 276 HOH HOH . E 4 HOH A 41 308 308 HOH HOH . E 4 HOH A 42 334 334 HOH HOH . E 4 HOH A 43 337 337 HOH HOH . E 4 HOH A 44 404 404 HOH HOH . E 4 HOH A 45 506 506 HOH HOH . E 4 HOH A 46 509 509 HOH HOH . E 4 HOH A 47 512 512 HOH HOH . E 4 HOH A 48 520 520 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -9.351 -3.707 8.02 1 42.8 ? S SO4 125 A 1 HETATM 2 O O1 SO4 . . . C 3 -10.309 -3.587 6.979 1 81.89 ? O1 SO4 125 A 1 HETATM 3 O O2 SO4 . . . C 3 -9.768 -4.741 8.911 1 95.98 ? O2 SO4 125 A 1 HETATM 4 O O3 SO4 . . . C 3 -9.319 -2.475 8.738 1 84.47 ? O3 SO4 125 A 1 HETATM 5 O O4 SO4 . . . C 3 -8.054 -3.999 7.524 1 78.84 ? O4 SO4 125 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #