data_1RBM # _model_server_result.job_id f5foL5X59Rl2zHmzdi-cIQ _model_server_result.datetime_utc '2024-12-22 05:58:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rbm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":522}' # _entry.id 1RBM # _exptl.entry_id 1RBM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1RBM _cell.length_a 126.099 _cell.length_b 126.099 _cell.length_c 94.269 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RBM _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 389 n n P O2 PO4 sing 390 n n P O3 PO4 sing 391 n n P O4 PO4 sing 392 n n # _atom_sites.entry_id 1RBM _atom_sites.fract_transf_matrix[1][1] 0.00793 _atom_sites.fract_transf_matrix[1][2] 0.004579 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010608 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 521 521 PO4 PO4 . D 2 PO4 A 1 522 522 PO4 PO4 . E 3 KT5 A 1 510 510 KT5 KT5 . F 2 PO4 B 1 621 621 PO4 PO4 . G 2 PO4 B 1 622 622 PO4 PO4 . H 3 KT5 B 1 610 610 KT5 KT5 . I 4 HOH A 1 523 1 HOH HOH . I 4 HOH A 2 524 3 HOH HOH . I 4 HOH A 3 525 4 HOH HOH . I 4 HOH A 4 526 5 HOH HOH . I 4 HOH A 5 527 6 HOH HOH . I 4 HOH A 6 528 8 HOH HOH . I 4 HOH A 7 529 9 HOH HOH . I 4 HOH A 8 530 11 HOH HOH . I 4 HOH A 9 531 12 HOH HOH . I 4 HOH A 10 532 14 HOH HOH . I 4 HOH A 11 533 16 HOH HOH . I 4 HOH A 12 534 18 HOH HOH . I 4 HOH A 13 535 19 HOH HOH . I 4 HOH A 14 536 20 HOH HOH . I 4 HOH A 15 537 21 HOH HOH . I 4 HOH A 16 538 24 HOH HOH . I 4 HOH A 17 539 25 HOH HOH . I 4 HOH A 18 540 26 HOH HOH . I 4 HOH A 19 541 30 HOH HOH . I 4 HOH A 20 542 31 HOH HOH . I 4 HOH A 21 543 32 HOH HOH . I 4 HOH A 22 544 33 HOH HOH . I 4 HOH A 23 545 36 HOH HOH . I 4 HOH A 24 546 39 HOH HOH . I 4 HOH A 25 547 40 HOH HOH . I 4 HOH A 26 548 46 HOH HOH . I 4 HOH A 27 549 48 HOH HOH . I 4 HOH A 28 550 49 HOH HOH . I 4 HOH A 29 551 51 HOH HOH . I 4 HOH A 30 552 53 HOH HOH . I 4 HOH A 31 553 55 HOH HOH . I 4 HOH A 32 554 59 HOH HOH . I 4 HOH A 33 555 60 HOH HOH . I 4 HOH A 34 556 61 HOH HOH . I 4 HOH A 35 557 62 HOH HOH . I 4 HOH A 36 558 63 HOH HOH . I 4 HOH A 37 559 66 HOH HOH . I 4 HOH A 38 560 67 HOH HOH . I 4 HOH A 39 561 71 HOH HOH . I 4 HOH A 40 562 75 HOH HOH . I 4 HOH A 41 563 76 HOH HOH . I 4 HOH A 42 564 77 HOH HOH . I 4 HOH A 43 565 78 HOH HOH . I 4 HOH A 44 566 81 HOH HOH . I 4 HOH A 45 567 82 HOH HOH . I 4 HOH A 46 568 84 HOH HOH . I 4 HOH A 47 569 86 HOH HOH . I 4 HOH A 48 570 87 HOH HOH . I 4 HOH A 49 571 88 HOH HOH . I 4 HOH A 50 572 89 HOH HOH . I 4 HOH A 51 573 90 HOH HOH . I 4 HOH A 52 574 91 HOH HOH . I 4 HOH A 53 575 93 HOH HOH . I 4 HOH A 54 576 95 HOH HOH . I 4 HOH A 55 577 97 HOH HOH . I 4 HOH A 56 578 98 HOH HOH . I 4 HOH A 57 579 99 HOH HOH . I 4 HOH A 58 580 101 HOH HOH . I 4 HOH A 59 581 102 HOH HOH . I 4 HOH A 60 582 104 HOH HOH . I 4 HOH A 61 583 105 HOH HOH . I 4 HOH A 62 584 106 HOH HOH . I 4 HOH A 63 585 109 HOH HOH . I 4 HOH A 64 586 110 HOH HOH . I 4 HOH A 65 587 111 HOH HOH . I 4 HOH A 66 588 112 HOH HOH . I 4 HOH A 67 589 113 HOH HOH . I 4 HOH A 68 590 114 HOH HOH . I 4 HOH A 69 591 115 HOH HOH . I 4 HOH A 70 592 117 HOH HOH . I 4 HOH A 71 593 118 HOH HOH . I 4 HOH A 72 594 123 HOH HOH . I 4 HOH A 73 595 124 HOH HOH . I 4 HOH A 74 596 126 HOH HOH . I 4 HOH A 75 597 128 HOH HOH . I 4 HOH A 76 598 129 HOH HOH . I 4 HOH A 77 599 131 HOH HOH . I 4 HOH A 78 600 132 HOH HOH . I 4 HOH A 79 601 133 HOH HOH . I 4 HOH A 80 602 138 HOH HOH . I 4 HOH A 81 603 140 HOH HOH . I 4 HOH A 82 604 141 HOH HOH . I 4 HOH A 83 605 142 HOH HOH . I 4 HOH A 84 606 143 HOH HOH . I 4 HOH A 85 607 145 HOH HOH . I 4 HOH A 86 608 146 HOH HOH . I 4 HOH A 87 609 147 HOH HOH . I 4 HOH A 88 610 148 HOH HOH . I 4 HOH A 89 611 152 HOH HOH . I 4 HOH A 90 612 153 HOH HOH . I 4 HOH A 91 613 154 HOH HOH . I 4 HOH A 92 614 155 HOH HOH . I 4 HOH A 93 615 156 HOH HOH . I 4 HOH A 94 616 157 HOH HOH . I 4 HOH A 95 617 159 HOH HOH . I 4 HOH A 96 618 162 HOH HOH . J 4 HOH B 1 623 2 HOH HOH . J 4 HOH B 2 624 7 HOH HOH . J 4 HOH B 3 625 10 HOH HOH . J 4 HOH B 4 626 13 HOH HOH . J 4 HOH B 5 627 15 HOH HOH . J 4 HOH B 6 628 17 HOH HOH . J 4 HOH B 7 629 22 HOH HOH . J 4 HOH B 8 630 23 HOH HOH . J 4 HOH B 9 631 27 HOH HOH . J 4 HOH B 10 632 28 HOH HOH . J 4 HOH B 11 633 29 HOH HOH . J 4 HOH B 12 634 34 HOH HOH . J 4 HOH B 13 635 35 HOH HOH . J 4 HOH B 14 636 37 HOH HOH . J 4 HOH B 15 637 38 HOH HOH . J 4 HOH B 16 638 41 HOH HOH . J 4 HOH B 17 639 42 HOH HOH . J 4 HOH B 18 640 43 HOH HOH . J 4 HOH B 19 641 44 HOH HOH . J 4 HOH B 20 642 45 HOH HOH . J 4 HOH B 21 643 47 HOH HOH . J 4 HOH B 22 644 50 HOH HOH . J 4 HOH B 23 645 52 HOH HOH . J 4 HOH B 24 646 54 HOH HOH . J 4 HOH B 25 647 56 HOH HOH . J 4 HOH B 26 648 57 HOH HOH . J 4 HOH B 27 649 58 HOH HOH . J 4 HOH B 28 650 64 HOH HOH . J 4 HOH B 29 651 65 HOH HOH . J 4 HOH B 30 652 68 HOH HOH . J 4 HOH B 31 653 69 HOH HOH . J 4 HOH B 32 654 70 HOH HOH . J 4 HOH B 33 655 72 HOH HOH . J 4 HOH B 34 656 73 HOH HOH . J 4 HOH B 35 657 74 HOH HOH . J 4 HOH B 36 658 79 HOH HOH . J 4 HOH B 37 659 80 HOH HOH . J 4 HOH B 38 660 83 HOH HOH . J 4 HOH B 39 661 85 HOH HOH . J 4 HOH B 40 662 92 HOH HOH . J 4 HOH B 41 663 94 HOH HOH . J 4 HOH B 42 664 96 HOH HOH . J 4 HOH B 43 665 100 HOH HOH . J 4 HOH B 44 666 103 HOH HOH . J 4 HOH B 45 667 107 HOH HOH . J 4 HOH B 46 668 108 HOH HOH . J 4 HOH B 47 669 116 HOH HOH . J 4 HOH B 48 670 119 HOH HOH . J 4 HOH B 49 671 120 HOH HOH . J 4 HOH B 50 672 121 HOH HOH . J 4 HOH B 51 673 122 HOH HOH . J 4 HOH B 52 674 125 HOH HOH . J 4 HOH B 53 675 127 HOH HOH . J 4 HOH B 54 676 130 HOH HOH . J 4 HOH B 55 677 134 HOH HOH . J 4 HOH B 56 678 135 HOH HOH . J 4 HOH B 57 679 136 HOH HOH . J 4 HOH B 58 680 137 HOH HOH . J 4 HOH B 59 681 139 HOH HOH . J 4 HOH B 60 682 144 HOH HOH . J 4 HOH B 61 683 149 HOH HOH . J 4 HOH B 62 684 150 HOH HOH . J 4 HOH B 63 685 151 HOH HOH . J 4 HOH B 64 686 158 HOH HOH . J 4 HOH B 65 687 160 HOH HOH . J 4 HOH B 66 688 161 HOH HOH . J 4 HOH B 67 689 163 HOH HOH . J 4 HOH B 68 690 166 HOH HOH . J 4 HOH B 69 691 167 HOH HOH . J 4 HOH B 70 692 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 -27.655 71.154 10.316 1 51.9 ? P PO4 522 A 1 HETATM 2 O O1 PO4 . . . D 2 -28.232 72.541 10.554 1 50.43 ? O1 PO4 522 A 1 HETATM 3 O O2 PO4 . . . D 2 -28.776 70.184 9.983 1 51.3 ? O2 PO4 522 A 1 HETATM 4 O O3 PO4 . . . D 2 -26.97 70.67 11.587 1 48.98 ? O3 PO4 522 A 1 HETATM 5 O O4 PO4 . . . D 2 -26.692 71.238 9.143 1 48.38 ? O4 PO4 522 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #