data_1RBW # _model_server_result.job_id V7TxQz6J6qzu-clYiDmcbg _model_server_result.datetime_utc '2024-11-23 14:11:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rbw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":131}' # _entry.id 1RBW # _exptl.entry_id 1RBW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.07 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GUANIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.83 _cell.angle_gamma 90 _cell.entry_id 1RBW _cell.length_a 30.327 _cell.length_b 38.412 _cell.length_c 53.143 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RBW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'C H5 N3' _chem_comp.formula_weight 59.07 _chem_comp.id GAI _chem_comp.mon_nstd_flag . _chem_comp.name GUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 GAI doub 83 n n C N2 GAI sing 84 n n C N3 GAI sing 85 n n N1 HN1 GAI sing 86 n n N2 HN21 GAI sing 87 n n N2 HN22 GAI sing 88 n n N3 HN31 GAI sing 89 n n N3 HN32 GAI sing 90 n n # _atom_sites.entry_id 1RBW _atom_sites.fract_transf_matrix[1][1] 0.032974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009349 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026034 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAI A 1 131 131 GAI GAI . C 2 GAI A 1 132 132 GAI GAI . D 2 GAI A 1 133 133 GAI GAI . E 2 GAI A 1 135 135 GAI GAI . F 3 HOH A 1 152 152 HOH HOH . F 3 HOH A 2 153 153 HOH HOH . F 3 HOH A 3 154 154 HOH HOH . F 3 HOH A 4 155 155 HOH HOH . F 3 HOH A 5 156 156 HOH HOH . F 3 HOH A 6 157 157 HOH HOH . F 3 HOH A 7 158 158 HOH HOH . F 3 HOH A 8 159 159 HOH HOH . F 3 HOH A 9 160 160 HOH HOH . F 3 HOH A 10 161 161 HOH HOH . F 3 HOH A 11 162 162 HOH HOH . F 3 HOH A 12 163 163 HOH HOH . F 3 HOH A 13 164 164 HOH HOH . F 3 HOH A 14 165 165 HOH HOH . F 3 HOH A 15 166 166 HOH HOH . F 3 HOH A 16 167 167 HOH HOH . F 3 HOH A 17 168 168 HOH HOH . F 3 HOH A 18 170 170 HOH HOH . F 3 HOH A 19 171 171 HOH HOH . F 3 HOH A 20 172 172 HOH HOH . F 3 HOH A 21 173 173 HOH HOH . F 3 HOH A 22 174 174 HOH HOH . F 3 HOH A 23 175 175 HOH HOH . F 3 HOH A 24 176 176 HOH HOH . F 3 HOH A 25 177 177 HOH HOH . F 3 HOH A 26 178 178 HOH HOH . F 3 HOH A 27 179 179 HOH HOH . F 3 HOH A 28 180 180 HOH HOH . F 3 HOH A 29 181 181 HOH HOH . F 3 HOH A 30 183 183 HOH HOH . F 3 HOH A 31 184 184 HOH HOH . F 3 HOH A 32 187 187 HOH HOH . F 3 HOH A 33 188 188 HOH HOH . F 3 HOH A 34 189 189 HOH HOH . F 3 HOH A 35 190 190 HOH HOH . F 3 HOH A 36 191 191 HOH HOH . F 3 HOH A 37 192 192 HOH HOH . F 3 HOH A 38 193 193 HOH HOH . F 3 HOH A 39 194 194 HOH HOH . F 3 HOH A 40 196 196 HOH HOH . F 3 HOH A 41 197 197 HOH HOH . F 3 HOH A 42 198 198 HOH HOH . F 3 HOH A 43 199 199 HOH HOH . F 3 HOH A 44 200 200 HOH HOH . F 3 HOH A 45 201 201 HOH HOH . F 3 HOH A 46 203 203 HOH HOH . F 3 HOH A 47 204 204 HOH HOH . F 3 HOH A 48 206 206 HOH HOH . F 3 HOH A 49 207 207 HOH HOH . F 3 HOH A 50 208 208 HOH HOH . F 3 HOH A 51 209 209 HOH HOH . F 3 HOH A 52 210 210 HOH HOH . F 3 HOH A 53 211 211 HOH HOH . F 3 HOH A 54 212 212 HOH HOH . F 3 HOH A 55 213 213 HOH HOH . F 3 HOH A 56 215 215 HOH HOH . F 3 HOH A 57 216 216 HOH HOH . F 3 HOH A 58 218 218 HOH HOH . F 3 HOH A 59 219 219 HOH HOH . F 3 HOH A 60 220 220 HOH HOH . F 3 HOH A 61 221 221 HOH HOH . F 3 HOH A 62 222 222 HOH HOH . F 3 HOH A 63 223 223 HOH HOH . F 3 HOH A 64 224 224 HOH HOH . F 3 HOH A 65 225 225 HOH HOH . F 3 HOH A 66 226 226 HOH HOH . F 3 HOH A 67 227 227 HOH HOH . F 3 HOH A 68 228 228 HOH HOH . F 3 HOH A 69 229 229 HOH HOH . F 3 HOH A 70 230 230 HOH HOH . F 3 HOH A 71 231 231 HOH HOH . F 3 HOH A 72 232 232 HOH HOH . F 3 HOH A 73 233 233 HOH HOH . F 3 HOH A 74 234 234 HOH HOH . F 3 HOH A 75 235 235 HOH HOH . F 3 HOH A 76 236 236 HOH HOH . F 3 HOH A 77 237 237 HOH HOH . F 3 HOH A 78 238 238 HOH HOH . F 3 HOH A 79 239 239 HOH HOH . F 3 HOH A 80 240 240 HOH HOH . F 3 HOH A 81 242 242 HOH HOH . F 3 HOH A 82 243 243 HOH HOH . F 3 HOH A 83 244 244 HOH HOH . F 3 HOH A 84 245 245 HOH HOH . F 3 HOH A 85 248 248 HOH HOH . F 3 HOH A 86 249 249 HOH HOH . F 3 HOH A 87 250 250 HOH HOH . F 3 HOH A 88 251 251 HOH HOH . F 3 HOH A 89 252 252 HOH HOH . F 3 HOH A 90 253 253 HOH HOH . F 3 HOH A 91 254 254 HOH HOH . F 3 HOH A 92 255 255 HOH HOH . F 3 HOH A 93 256 256 HOH HOH . F 3 HOH A 94 257 257 HOH HOH . F 3 HOH A 95 259 259 HOH HOH . F 3 HOH A 96 260 260 HOH HOH . F 3 HOH A 97 261 261 HOH HOH . F 3 HOH A 98 262 262 HOH HOH . F 3 HOH A 99 263 263 HOH HOH . F 3 HOH A 100 264 264 HOH HOH . F 3 HOH A 101 265 265 HOH HOH . F 3 HOH A 102 266 266 HOH HOH . F 3 HOH A 103 267 267 HOH HOH . F 3 HOH A 104 268 268 HOH HOH . F 3 HOH A 105 269 269 HOH HOH . F 3 HOH A 106 271 271 HOH HOH . F 3 HOH A 107 272 272 HOH HOH . F 3 HOH A 108 273 273 HOH HOH . F 3 HOH A 109 274 274 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GAI . . . B 2 18.212 22.096 12.602 1 50.47 ? C GAI 131 A 1 HETATM 2 N N1 GAI . . . B 2 19.235 22.853 12.202 1 49.96 ? N1 GAI 131 A 1 HETATM 3 N N2 GAI . . . B 2 17.427 21.5 11.702 1 49.57 ? N2 GAI 131 A 1 HETATM 4 N N3 GAI . . . B 2 18.02 21.879 13.902 1 48.83 ? N3 GAI 131 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #