data_1RC2 # _model_server_result.job_id b7Wf_G_9u8DnpQ6WuQNelw _model_server_result.datetime_utc '2025-04-23 13:36:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rc2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1RC2 # _exptl.entry_id 1RC2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-O-octyl-beta-D-glucopyranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RC2 _cell.length_a 93.55 _cell.length_b 93.55 _cell.length_c 80.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RC2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 75 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS tetrameric 4 author_and_software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PQS tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G 1 1,2,3,4 B,H 2 1 B,H 3 1,5,6,7 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -93.55 93.55 0 3 'crystal symmetry operation' 3_565 -y,x+1,z 0 -1 0 1 0 0 0 0 1 0 93.55 0 4 'crystal symmetry operation' 4_455 y-1,-x,z 0 1 0 -1 0 0 0 0 1 -93.55 0 0 5 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 187.1 0 0 6 'crystal symmetry operation' 3_645 -y+1,x-1,z 0 -1 0 1 0 0 0 0 1 93.55 -93.55 0 7 'crystal symmetry operation' 4_665 y+1,-x+1,z 0 1 0 -1 0 0 0 0 1 93.55 93.55 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BGL _chem_comp.mon_nstd_flag n _chem_comp.name 2-O-octyl-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 2-O-octyl-beta-D-glucose;2-O-octyl-D-glucose;2-O-octyl-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BGL sing 70 n n C1 C2 BGL sing 71 n n C1 O5 BGL sing 72 n n C1 H1 BGL sing 73 n n O1 HO1 BGL sing 74 n n C2 O2 BGL sing 75 n n C2 C3 BGL sing 76 n n C2 H2 BGL sing 77 n n O2 C1' BGL sing 78 n n C3 O3 BGL sing 79 n n C3 C4 BGL sing 80 n n C3 H3 BGL sing 81 n n O3 HO3 BGL sing 82 n n C4 O4 BGL sing 83 n n C4 C5 BGL sing 84 n n C4 H4 BGL sing 85 n n O4 HO4 BGL sing 86 n n C5 O5 BGL sing 87 n n C5 C6 BGL sing 88 n n C5 H5 BGL sing 89 n n C6 O6 BGL sing 90 n n C6 H61 BGL sing 91 n n C6 H62 BGL sing 92 n n O6 HO6 BGL sing 93 n n C1' C2' BGL sing 94 n n C1' "H1'1" BGL sing 95 n n C1' "H1'2" BGL sing 96 n n C2' C3' BGL sing 97 n n C2' "H2'1" BGL sing 98 n n C2' "H2'2" BGL sing 99 n n C3' C4' BGL sing 100 n n C3' "H3'1" BGL sing 101 n n C3' "H3'2" BGL sing 102 n n C4' C5' BGL sing 103 n n C4' "H4'1" BGL sing 104 n n C4' "H4'2" BGL sing 105 n n C5' C6' BGL sing 106 n n C5' "H5'1" BGL sing 107 n n C5' "H5'2" BGL sing 108 n n C6' C7' BGL sing 109 n n C6' "H6'1" BGL sing 110 n n C6' "H6'2" BGL sing 111 n n C7' C8' BGL sing 112 n n C7' "H7'1" BGL sing 113 n n C7' "H7'2" BGL sing 114 n n C8' "H8'1" BGL sing 115 n n C8' "H8'2" BGL sing 116 n n C8' "H8'3" BGL sing 117 n n # _pdbx_chem_comp_identifier.comp_id BGL _pdbx_chem_comp_identifier.identifier b-D-Glcp2octyl _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1RC2 _atom_sites.fract_transf_matrix[1][1] 0.010689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BGL B 1 600 600 BGL BGL . D 2 BGL B 1 601 601 BGL BGL . E 2 BGL B 1 602 602 BGL BGL . F 2 BGL B 1 603 603 BGL BGL . G 3 HOH B 1 1000 0 HOH HOH . G 3 HOH B 2 1001 1001 HOH HOH . G 3 HOH B 3 1003 1003 HOH HOH . G 3 HOH B 4 1004 1004 HOH HOH . G 3 HOH B 5 1005 1005 HOH HOH . G 3 HOH B 6 1006 1006 HOH HOH . G 3 HOH B 7 1007 1007 HOH HOH . G 3 HOH B 8 1008 1008 HOH HOH . G 3 HOH B 9 1009 1009 HOH HOH . G 3 HOH B 10 1010 1010 HOH HOH . G 3 HOH B 11 1011 1011 HOH HOH . G 3 HOH B 12 1013 1013 HOH HOH . G 3 HOH B 13 1015 1015 HOH HOH . G 3 HOH B 14 1017 1017 HOH HOH . G 3 HOH B 15 1019 1019 HOH HOH . G 3 HOH B 16 1020 1020 HOH HOH . G 3 HOH B 17 1021 1021 HOH HOH . G 3 HOH B 18 1022 1022 HOH HOH . G 3 HOH B 19 1023 1023 HOH HOH . G 3 HOH B 20 1024 1024 HOH HOH . G 3 HOH B 21 1025 1025 HOH HOH . G 3 HOH B 22 1044 1044 HOH HOH . G 3 HOH B 23 1045 1045 HOH HOH . G 3 HOH B 24 1067 1067 HOH HOH . G 3 HOH B 25 1069 1069 HOH HOH . G 3 HOH B 26 1073 1073 HOH HOH . G 3 HOH B 27 1075 1075 HOH HOH . G 3 HOH B 28 1076 1076 HOH HOH . G 3 HOH B 29 1077 1077 HOH HOH . G 3 HOH B 30 1078 1078 HOH HOH . G 3 HOH B 31 1079 1079 HOH HOH . G 3 HOH B 32 1096 1096 HOH HOH . G 3 HOH B 33 1097 1097 HOH HOH . G 3 HOH B 34 1101 1101 HOH HOH . G 3 HOH B 35 1105 1105 HOH HOH . G 3 HOH B 36 1107 1107 HOH HOH . G 3 HOH B 37 1108 1108 HOH HOH . G 3 HOH B 38 1115 1115 HOH HOH . G 3 HOH B 39 1116 1116 HOH HOH . G 3 HOH B 40 1124 1124 HOH HOH . G 3 HOH B 41 1168 1168 HOH HOH . G 3 HOH B 42 1170 1170 HOH HOH . G 3 HOH B 43 1172 1172 HOH HOH . G 3 HOH B 44 1174 1174 HOH HOH . G 3 HOH B 45 1176 1176 HOH HOH . G 3 HOH B 46 1182 1182 HOH HOH . G 3 HOH B 47 1184 1184 HOH HOH . G 3 HOH B 48 1204 1204 HOH HOH . G 3 HOH B 49 1206 1206 HOH HOH . G 3 HOH B 50 1208 1208 HOH HOH . G 3 HOH B 51 1210 1210 HOH HOH . G 3 HOH B 52 1212 1212 HOH HOH . G 3 HOH B 53 1214 1214 HOH HOH . G 3 HOH B 54 1216 1216 HOH HOH . G 3 HOH B 55 1218 1218 HOH HOH . G 3 HOH B 56 1220 1220 HOH HOH . G 3 HOH B 57 1222 1222 HOH HOH . G 3 HOH B 58 1250 1250 HOH HOH . G 3 HOH B 59 1252 1252 HOH HOH . G 3 HOH B 60 1254 1254 HOH HOH . G 3 HOH B 61 1256 1256 HOH HOH . G 3 HOH B 62 1258 1258 HOH HOH . H 3 HOH A 1 1018 1018 HOH HOH . H 3 HOH A 2 1026 1026 HOH HOH . H 3 HOH A 3 1027 1027 HOH HOH . H 3 HOH A 4 1028 1028 HOH HOH . H 3 HOH A 5 1030 1030 HOH HOH . H 3 HOH A 6 1031 1031 HOH HOH . H 3 HOH A 7 1032 1032 HOH HOH . H 3 HOH A 8 1033 1033 HOH HOH . H 3 HOH A 9 1034 1034 HOH HOH . H 3 HOH A 10 1035 1035 HOH HOH . H 3 HOH A 11 1036 1036 HOH HOH . H 3 HOH A 12 1037 1037 HOH HOH . H 3 HOH A 13 1038 1038 HOH HOH . H 3 HOH A 14 1039 1039 HOH HOH . H 3 HOH A 15 1040 1040 HOH HOH . H 3 HOH A 16 1041 1041 HOH HOH . H 3 HOH A 17 1042 1042 HOH HOH . H 3 HOH A 18 1043 1043 HOH HOH . H 3 HOH A 19 1046 1046 HOH HOH . H 3 HOH A 20 1047 1047 HOH HOH . H 3 HOH A 21 1048 1048 HOH HOH . H 3 HOH A 22 1049 1049 HOH HOH . H 3 HOH A 23 1050 1050 HOH HOH . H 3 HOH A 24 1051 1051 HOH HOH . H 3 HOH A 25 1052 1052 HOH HOH . H 3 HOH A 26 1053 1053 HOH HOH . H 3 HOH A 27 1054 1054 HOH HOH . H 3 HOH A 28 1055 1055 HOH HOH . H 3 HOH A 29 1056 1056 HOH HOH . H 3 HOH A 30 1057 1057 HOH HOH . H 3 HOH A 31 1058 1058 HOH HOH . H 3 HOH A 32 1060 1060 HOH HOH . H 3 HOH A 33 1062 1062 HOH HOH . H 3 HOH A 34 1063 1063 HOH HOH . H 3 HOH A 35 1064 1064 HOH HOH . H 3 HOH A 36 1065 1065 HOH HOH . H 3 HOH A 37 1081 1081 HOH HOH . H 3 HOH A 38 1082 1082 HOH HOH . H 3 HOH A 39 1083 1083 HOH HOH . H 3 HOH A 40 1084 1084 HOH HOH . H 3 HOH A 41 1085 1085 HOH HOH . H 3 HOH A 42 1086 1086 HOH HOH . H 3 HOH A 43 1087 1087 HOH HOH . H 3 HOH A 44 1088 1088 HOH HOH . H 3 HOH A 45 1089 1089 HOH HOH . H 3 HOH A 46 1091 1091 HOH HOH . H 3 HOH A 47 1092 1092 HOH HOH . H 3 HOH A 48 1094 1094 HOH HOH . H 3 HOH A 49 1095 1095 HOH HOH . H 3 HOH A 50 1154 1154 HOH HOH . H 3 HOH A 51 1156 1156 HOH HOH . H 3 HOH A 52 1158 1158 HOH HOH . H 3 HOH A 53 1194 1194 HOH HOH . H 3 HOH A 54 1196 1196 HOH HOH . H 3 HOH A 55 1198 1198 HOH HOH . H 3 HOH A 56 1200 1200 HOH HOH . H 3 HOH A 57 1202 1202 HOH HOH . H 3 HOH A 58 1224 1224 HOH HOH . H 3 HOH A 59 1226 1226 HOH HOH . H 3 HOH A 60 1228 1228 HOH HOH . H 3 HOH A 61 1230 1230 HOH HOH . H 3 HOH A 62 1232 1232 HOH HOH . H 3 HOH A 63 1238 1238 HOH HOH . H 3 HOH A 64 1240 1240 HOH HOH . H 3 HOH A 65 1242 1242 HOH HOH . H 3 HOH A 66 1244 1244 HOH HOH . H 3 HOH A 67 1246 1246 HOH HOH . H 3 HOH A 68 1248 1248 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BGL . . . C 2 -19.391 24.163 -0.213 1 104.45 ? C1 BGL 600 B 1 HETATM 2 O O1 BGL . . . C 2 -20.386 25.082 -0.041 1 104.5 ? O1 BGL 600 B 1 HETATM 3 C C2 BGL . . . C 2 -19.698 22.771 0.457 1 103.47 ? C2 BGL 600 B 1 HETATM 4 O O2 BGL . . . C 2 -19.883 22.923 1.882 1 101.98 ? O2 BGL 600 B 1 HETATM 5 C C3 BGL . . . C 2 -18.452 21.871 0.105 1 103.92 ? C3 BGL 600 B 1 HETATM 6 O O3 BGL . . . C 2 -18.458 20.578 0.597 1 104.44 ? O3 BGL 600 B 1 HETATM 7 C C4 BGL . . . C 2 -18.393 21.831 -1.457 1 104 ? C4 BGL 600 B 1 HETATM 8 O O4 BGL . . . C 2 -17.619 20.855 -2.044 1 104.18 ? O4 BGL 600 B 1 HETATM 9 C C5 BGL . . . C 2 -17.978 23.317 -1.884 1 105.01 ? C5 BGL 600 B 1 HETATM 10 O O5 BGL . . . C 2 -19.212 24.047 -1.648 1 105.21 ? O5 BGL 600 B 1 HETATM 11 C C6 BGL . . . C 2 -17.51 23.676 -3.349 1 105.69 ? C6 BGL 600 B 1 HETATM 12 O O6 BGL . . . C 2 -17.037 24.969 -3.675 1 105.66 ? O6 BGL 600 B 1 HETATM 13 C C1' BGL . . . C 2 -21.006 23.69 2.402 1 100.95 ? C1' BGL 600 B 1 HETATM 14 C C2' BGL . . . C 2 -21.091 23.799 3.861 1 99.56 ? C2' BGL 600 B 1 HETATM 15 C C3' BGL . . . C 2 -22.26 23.036 4.468 1 98.37 ? C3' BGL 600 B 1 HETATM 16 C C4' BGL . . . C 2 -22.284 23.195 5.976 1 97.81 ? C4' BGL 600 B 1 HETATM 17 C C5' BGL . . . C 2 -23.435 22.442 6.576 1 97.38 ? C5' BGL 600 B 1 HETATM 18 C C6' BGL . . . C 2 -23.33 22.224 8.071 1 97.94 ? C6' BGL 600 B 1 HETATM 19 C C7' BGL . . . C 2 -24.475 21.336 8.517 1 99.23 ? C7' BGL 600 B 1 HETATM 20 C C8' BGL . . . C 2 -24.677 21.48 9.954 1 98.95 ? C8' BGL 600 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 20 #