data_1RCD # _model_server_result.job_id CTRclZpXZj6SoP5xwxbtow _model_server_result.datetime_utc '2024-12-27 07:02:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 1RCD # _exptl.entry_id 1RCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.154 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIMETHYL GLYCINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RCD _cell.length_a 182.355 _cell.length_b 182.355 _cell.length_c 182.355 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H12 N O2 1' _chem_comp.formula_weight 118.154 _chem_comp.id BET _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIMETHYL GLYCINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA BET sing 70 n n N C1 BET sing 71 n n N C2 BET sing 72 n n N C3 BET sing 73 n n CA C BET sing 74 n n CA HA2 BET sing 75 n n CA HA3 BET sing 76 n n C O BET doub 77 n n C OXT BET sing 78 n n OXT HXT BET sing 79 n n C1 H11 BET sing 80 n n C1 H12 BET sing 81 n n C1 H13 BET sing 82 n n C2 H21 BET sing 83 n n C2 H22 BET sing 84 n n C2 H23 BET sing 85 n n C3 H31 BET sing 86 n n C3 H32 BET sing 87 n n C3 H33 BET sing 88 n n # _atom_sites.entry_id 1RCD _atom_sites.fract_transf_matrix[1][1] 0.005484 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005484 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005484 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BET A 1 200 200 BET BET . C 3 HOH A 1 1004 1004 HOH HOH . C 3 HOH A 2 1005 1005 HOH HOH . C 3 HOH A 3 1006 1006 HOH HOH . C 3 HOH A 4 1008 1008 HOH HOH . C 3 HOH A 5 1021 1021 HOH HOH . C 3 HOH A 6 1023 1023 HOH HOH . C 3 HOH A 7 1028 1028 HOH HOH . C 3 HOH A 8 1032 1032 HOH HOH . C 3 HOH A 9 1040 1040 HOH HOH . C 3 HOH A 10 1045 1045 HOH HOH . C 3 HOH A 11 1052 1052 HOH HOH . C 3 HOH A 12 1064 1064 HOH HOH . C 3 HOH A 13 1070 1070 HOH HOH . C 3 HOH A 14 1071 1071 HOH HOH . C 3 HOH A 15 1072 1072 HOH HOH . C 3 HOH A 16 1075 1075 HOH HOH . C 3 HOH A 17 1077 1077 HOH HOH . C 3 HOH A 18 1082 1082 HOH HOH . C 3 HOH A 19 1103 1103 HOH HOH . C 3 HOH A 20 1114 1114 HOH HOH . C 3 HOH A 21 1120 1120 HOH HOH . C 3 HOH A 22 1122 1122 HOH HOH . C 3 HOH A 23 1127 1127 HOH HOH . C 3 HOH A 24 1130 1130 HOH HOH . C 3 HOH A 25 1137 1137 HOH HOH . C 3 HOH A 26 1138 1138 HOH HOH . C 3 HOH A 27 1142 1142 HOH HOH . C 3 HOH A 28 1147 1147 HOH HOH . C 3 HOH A 29 1163 1163 HOH HOH . C 3 HOH A 30 1164 1164 HOH HOH . C 3 HOH A 31 2006 2006 HOH HOH . C 3 HOH A 32 2070 2070 HOH HOH . C 3 HOH A 33 2082 2082 HOH HOH . C 3 HOH A 34 2114 2114 HOH HOH . C 3 HOH A 35 2122 2122 HOH HOH . C 3 HOH A 36 2147 2147 HOH HOH . C 3 HOH A 37 3006 3006 HOH HOH . C 3 HOH A 38 3114 3114 HOH HOH . C 3 HOH A 39 3147 3147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N BET . . . B 2 37.431 -0.045 34.306 1 42.94 ? N BET 200 A 1 HETATM 2 C CA BET . . . B 2 36.3 -0.624 33.748 1 45.07 ? CA BET 200 A 1 HETATM 3 C C BET . . . B 2 35.745 0.182 32.568 1 46.14 ? C BET 200 A 1 HETATM 4 O O BET . . . B 2 35.792 -0.33 31.426 1 47.68 ? O BET 200 A 1 HETATM 5 O OXT BET . . . B 2 34.959 1.125 32.807 1 49.51 ? OXT BET 200 A 1 HETATM 6 C C1 BET . . . B 2 38.306 0.314 33.311 1 42.13 ? C1 BET 200 A 1 HETATM 7 C C2 BET . . . B 2 37.079 1.067 35.024 1 43.65 ? C2 BET 200 A 1 HETATM 8 C C3 BET . . . B 2 38.018 -0.948 35.149 1 42.18 ? C3 BET 200 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #