data_1RCM # _model_server_result.job_id slmBwngJsAJfYeK09G0M2w _model_server_result.datetime_utc '2024-12-23 09:42:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rcm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":130}' # _entry.id 1RCM # _exptl.entry_id 1RCM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1RCM _cell.length_a 77.7 _cell.length_b 81.3 _cell.length_c 38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RCM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf2 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf4 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? covale ? covale1 A SG CYS 127 A CYS 127 1_555 C CH3 ACY . A ACY 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale2 B SG CYS 127 B CYS 127 1_555 D CH3 ACY . B ACY 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1RCM _atom_sites.fract_transf_matrix[1][1] 0.01287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACY A 1 130 127 ACY CM . D 2 ACY B 1 130 127 ACY CM . E 3 HOH A 1 401 401 HOH HOH . E 3 HOH A 2 402 402 HOH HOH . E 3 HOH A 3 403 403 HOH HOH . E 3 HOH A 4 404 404 HOH HOH . E 3 HOH A 5 405 405 HOH HOH . E 3 HOH A 6 406 406 HOH HOH . E 3 HOH A 7 407 407 HOH HOH . E 3 HOH A 8 408 408 HOH HOH . E 3 HOH A 9 409 409 HOH HOH . E 3 HOH A 10 410 410 HOH HOH . E 3 HOH A 11 414 414 HOH HOH . E 3 HOH A 12 417 417 HOH HOH . E 3 HOH A 13 418 418 HOH HOH . E 3 HOH A 14 419 419 HOH HOH . E 3 HOH A 15 433 433 HOH HOH . E 3 HOH A 16 434 434 HOH HOH . E 3 HOH A 17 435 435 HOH HOH . E 3 HOH A 18 438 438 HOH HOH . E 3 HOH A 19 439 439 HOH HOH . E 3 HOH A 20 440 440 HOH HOH . E 3 HOH A 21 441 441 HOH HOH . E 3 HOH A 22 442 442 HOH HOH . E 3 HOH A 23 443 443 HOH HOH . E 3 HOH A 24 444 444 HOH HOH . E 3 HOH A 25 446 446 HOH HOH . E 3 HOH A 26 447 447 HOH HOH . E 3 HOH A 27 449 449 HOH HOH . E 3 HOH A 28 461 461 HOH HOH . E 3 HOH A 29 462 462 HOH HOH . E 3 HOH A 30 465 465 HOH HOH . E 3 HOH A 31 468 468 HOH HOH . E 3 HOH A 32 469 469 HOH HOH . E 3 HOH A 33 474 474 HOH HOH . E 3 HOH A 34 476 476 HOH HOH . E 3 HOH A 35 477 477 HOH HOH . E 3 HOH A 36 478 478 HOH HOH . E 3 HOH A 37 482 482 HOH HOH . E 3 HOH A 38 483 483 HOH HOH . E 3 HOH A 39 484 484 HOH HOH . E 3 HOH A 40 485 485 HOH HOH . E 3 HOH A 41 486 486 HOH HOH . E 3 HOH A 42 490 490 HOH HOH . E 3 HOH A 43 491 491 HOH HOH . E 3 HOH A 44 492 492 HOH HOH . E 3 HOH A 45 493 493 HOH HOH . E 3 HOH A 46 494 494 HOH HOH . E 3 HOH A 47 495 495 HOH HOH . E 3 HOH A 48 496 496 HOH HOH . E 3 HOH A 49 497 497 HOH HOH . E 3 HOH A 50 498 498 HOH HOH . E 3 HOH A 51 499 499 HOH HOH . E 3 HOH A 52 501 501 HOH HOH . E 3 HOH A 53 502 502 HOH HOH . E 3 HOH A 54 503 503 HOH HOH . E 3 HOH A 55 504 504 HOH HOH . E 3 HOH A 56 506 506 HOH HOH . E 3 HOH A 57 508 508 HOH HOH . E 3 HOH A 58 509 509 HOH HOH . E 3 HOH A 59 530 530 HOH HOH . E 3 HOH A 60 531 531 HOH HOH . E 3 HOH A 61 532 532 HOH HOH . E 3 HOH A 62 533 533 HOH HOH . E 3 HOH A 63 534 534 HOH HOH . E 3 HOH A 64 535 535 HOH HOH . E 3 HOH A 65 536 536 HOH HOH . E 3 HOH A 66 537 537 HOH HOH . E 3 HOH A 67 538 538 HOH HOH . E 3 HOH A 68 539 539 HOH HOH . E 3 HOH A 69 554 554 HOH HOH . E 3 HOH A 70 555 555 HOH HOH . E 3 HOH A 71 556 556 HOH HOH . E 3 HOH A 72 557 557 HOH HOH . E 3 HOH A 73 558 558 HOH HOH . E 3 HOH A 74 559 559 HOH HOH . E 3 HOH A 75 560 560 HOH HOH . E 3 HOH A 76 562 562 HOH HOH . E 3 HOH A 77 564 564 HOH HOH . E 3 HOH A 78 565 565 HOH HOH . E 3 HOH A 79 566 566 HOH HOH . F 3 HOH B 1 411 411 HOH HOH . F 3 HOH B 2 412 412 HOH HOH . F 3 HOH B 3 413 413 HOH HOH . F 3 HOH B 4 415 415 HOH HOH . F 3 HOH B 5 420 420 HOH HOH . F 3 HOH B 6 421 421 HOH HOH . F 3 HOH B 7 423 423 HOH HOH . F 3 HOH B 8 424 424 HOH HOH . F 3 HOH B 9 425 425 HOH HOH . F 3 HOH B 10 427 427 HOH HOH . F 3 HOH B 11 428 428 HOH HOH . F 3 HOH B 12 429 429 HOH HOH . F 3 HOH B 13 430 430 HOH HOH . F 3 HOH B 14 431 431 HOH HOH . F 3 HOH B 15 432 432 HOH HOH . F 3 HOH B 16 436 436 HOH HOH . F 3 HOH B 17 437 437 HOH HOH . F 3 HOH B 18 463 463 HOH HOH . F 3 HOH B 19 466 466 HOH HOH . F 3 HOH B 20 467 467 HOH HOH . F 3 HOH B 21 470 470 HOH HOH . F 3 HOH B 22 471 471 HOH HOH . F 3 HOH B 23 472 472 HOH HOH . F 3 HOH B 24 479 479 HOH HOH . F 3 HOH B 25 480 480 HOH HOH . F 3 HOH B 26 481 481 HOH HOH . F 3 HOH B 27 500 500 HOH HOH . F 3 HOH B 28 510 510 HOH HOH . F 3 HOH B 29 512 512 HOH HOH . F 3 HOH B 30 513 513 HOH HOH . F 3 HOH B 31 514 514 HOH HOH . F 3 HOH B 32 515 515 HOH HOH . F 3 HOH B 33 516 516 HOH HOH . F 3 HOH B 34 518 518 HOH HOH . F 3 HOH B 35 519 519 HOH HOH . F 3 HOH B 36 520 520 HOH HOH . F 3 HOH B 37 521 521 HOH HOH . F 3 HOH B 38 522 522 HOH HOH . F 3 HOH B 39 540 540 HOH HOH . F 3 HOH B 40 541 541 HOH HOH . F 3 HOH B 41 542 542 HOH HOH . F 3 HOH B 42 544 544 HOH HOH . F 3 HOH B 43 545 545 HOH HOH . F 3 HOH B 44 546 546 HOH HOH . F 3 HOH B 45 547 547 HOH HOH . F 3 HOH B 46 548 548 HOH HOH . F 3 HOH B 47 549 549 HOH HOH . F 3 HOH B 48 550 550 HOH HOH . F 3 HOH B 49 551 551 HOH HOH . F 3 HOH B 50 552 552 HOH HOH . F 3 HOH B 51 553 553 HOH HOH . F 3 HOH B 52 561 561 HOH HOH . F 3 HOH B 53 563 563 HOH HOH . F 3 HOH B 54 567 567 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . C 2 4.632 24.61 3.741 1 55.69 ? C ACY 130 A 1 HETATM 2 O O ACY . . . C 2 3.566 24.125 4.123 1 57.04 ? O ACY 130 A 1 HETATM 3 O OXT ACY . . . C 2 4.892 25.809 3.903 1 56.94 ? OXT ACY 130 A 1 HETATM 4 C CH3 ACY . . . C 2 5.647 23.686 3.074 1 53.7 ? CH3 ACY 130 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #