data_1REK
#
_model_server_result.job_id            z9dV5VBSpDs9BH5xxnCL1w 
_model_server_result.datetime_utc      '2024-10-12 16:33:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1rek 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":352}' 
#
_entry.id    1REK 
#
_exptl.entry_id    1REK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              86.132 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PENTANAL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1REK 
_cell.length_a            53.6 
_cell.length_b            71.9 
_cell.length_c            98.9 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1REK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TRP 196 A TRP 196 1_555 A N TPO 197 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C TPO 197 A TPO 197 1_555 A N LEU 198 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale3 A C VAL 337 A VAL 337 1_555 A N SEP 338 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale4 A C SEP 338 A SEP 338 1_555 A N ILE 339 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C5 H10 O' 
_chem_comp.formula_weight    86.132 
_chem_comp.id                PTL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PENTANAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PTL doub 357 n n 
C1 C2 PTL sing 358 n n 
C1 H1 PTL sing 359 n n 
C2 C3 PTL sing 360 n n 
C2 H21 PTL sing 361 n n 
C2 H22 PTL sing 362 n n 
C3 C4 PTL sing 363 n n 
C3 H31 PTL sing 364 n n 
C3 H32 PTL sing 365 n n 
C4 C5 PTL sing 366 n n 
C4 H41 PTL sing 367 n n 
C4 H42 PTL sing 368 n n 
C5 H51 PTL sing 369 n n 
C5 H52 PTL sing 370 n n 
C5 H53 PTL sing 371 n n 
#
_atom_sites.entry_id                     1REK 
_atom_sites.fract_transf_matrix[1][1]    0.018657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010111 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 B8L A 1 351 351 B8L BAL . 
C 3 PTL A 1 352 352 PTL PAN . 
D 4 HOH A 1 405 405 HOH H2O . 
D 4 HOH A 2 406 406 HOH H2O . 
D 4 HOH A 3 407 407 HOH H2O . 
D 4 HOH A 4 408 408 HOH H2O . 
D 4 HOH A 5 411 411 HOH H2O . 
D 4 HOH A 6 413 413 HOH H2O . 
D 4 HOH A 7 414 414 HOH H2O . 
D 4 HOH A 8 415 415 HOH H2O . 
D 4 HOH A 9 416 416 HOH H2O . 
D 4 HOH A 10 417 417 HOH H2O . 
D 4 HOH A 11 419 419 HOH H2O . 
D 4 HOH A 12 420 420 HOH H2O . 
D 4 HOH A 13 421 421 HOH H2O . 
D 4 HOH A 14 423 423 HOH H2O . 
D 4 HOH A 15 424 424 HOH H2O . 
D 4 HOH A 16 425 425 HOH H2O . 
D 4 HOH A 17 426 426 HOH H2O . 
D 4 HOH A 18 427 427 HOH H2O . 
D 4 HOH A 19 428 428 HOH H2O . 
D 4 HOH A 20 430 430 HOH H2O . 
D 4 HOH A 21 431 431 HOH H2O . 
D 4 HOH A 22 432 432 HOH H2O . 
D 4 HOH A 23 434 434 HOH H2O . 
D 4 HOH A 24 436 436 HOH H2O . 
D 4 HOH A 25 437 437 HOH H2O . 
D 4 HOH A 26 440 440 HOH H2O . 
D 4 HOH A 27 441 441 HOH H2O . 
D 4 HOH A 28 442 442 HOH H2O . 
D 4 HOH A 29 443 443 HOH H2O . 
D 4 HOH A 30 444 444 HOH H2O . 
D 4 HOH A 31 445 445 HOH H2O . 
D 4 HOH A 32 448 448 HOH H2O . 
D 4 HOH A 33 449 449 HOH H2O . 
D 4 HOH A 34 450 450 HOH H2O . 
D 4 HOH A 35 451 451 HOH H2O . 
D 4 HOH A 36 453 453 HOH H2O . 
D 4 HOH A 37 454 454 HOH H2O . 
D 4 HOH A 38 455 455 HOH H2O . 
D 4 HOH A 39 456 456 HOH H2O . 
D 4 HOH A 40 457 457 HOH H2O . 
D 4 HOH A 41 458 458 HOH H2O . 
D 4 HOH A 42 459 459 HOH H2O . 
D 4 HOH A 43 460 460 HOH H2O . 
D 4 HOH A 44 461 461 HOH H2O . 
D 4 HOH A 45 463 463 HOH H2O . 
D 4 HOH A 46 467 467 HOH H2O . 
D 4 HOH A 47 468 468 HOH H2O . 
D 4 HOH A 48 469 469 HOH H2O . 
D 4 HOH A 49 470 470 HOH H2O . 
D 4 HOH A 50 471 471 HOH H2O . 
D 4 HOH A 51 472 472 HOH H2O . 
D 4 HOH A 52 473 473 HOH H2O . 
D 4 HOH A 53 474 474 HOH H2O . 
D 4 HOH A 54 475 475 HOH H2O . 
D 4 HOH A 55 476 476 HOH H2O . 
D 4 HOH A 56 477 477 HOH H2O . 
D 4 HOH A 57 478 478 HOH H2O . 
D 4 HOH A 58 479 479 HOH H2O . 
D 4 HOH A 59 480 480 HOH H2O . 
D 4 HOH A 60 481 481 HOH H2O . 
D 4 HOH A 61 484 484 HOH H2O . 
D 4 HOH A 62 485 485 HOH H2O . 
D 4 HOH A 63 486 486 HOH H2O . 
D 4 HOH A 64 487 487 HOH H2O . 
D 4 HOH A 65 488 488 HOH H2O . 
D 4 HOH A 66 489 489 HOH H2O . 
D 4 HOH A 67 490 490 HOH H2O . 
D 4 HOH A 68 491 491 HOH H2O . 
D 4 HOH A 69 492 492 HOH H2O . 
D 4 HOH A 70 493 493 HOH H2O . 
D 4 HOH A 71 494 494 HOH H2O . 
D 4 HOH A 72 495 495 HOH H2O . 
D 4 HOH A 73 496 496 HOH H2O . 
D 4 HOH A 74 497 497 HOH H2O . 
D 4 HOH A 75 498 498 HOH H2O . 
D 4 HOH A 76 499 499 HOH H2O . 
D 4 HOH A 77 500 500 HOH H2O . 
D 4 HOH A 78 501 501 HOH H2O . 
D 4 HOH A 79 502 502 HOH H2O . 
D 4 HOH A 80 503 503 HOH H2O . 
D 4 HOH A 81 505 505 HOH H2O . 
D 4 HOH A 82 506 506 HOH H2O . 
D 4 HOH A 83 507 507 HOH H2O . 
D 4 HOH A 84 508 508 HOH H2O . 
D 4 HOH A 85 509 509 HOH H2O . 
D 4 HOH A 86 510 510 HOH H2O . 
D 4 HOH A 87 511 511 HOH H2O . 
D 4 HOH A 88 512 512 HOH H2O . 
D 4 HOH A 89 513 513 HOH H2O . 
D 4 HOH A 90 514 514 HOH H2O . 
D 4 HOH A 91 515 515 HOH H2O . 
D 4 HOH A 92 516 516 HOH H2O . 
D 4 HOH A 93 517 517 HOH H2O . 
D 4 HOH A 94 518 518 HOH H2O . 
D 4 HOH A 95 519 519 HOH H2O . 
D 4 HOH A 96 520 520 HOH H2O . 
D 4 HOH A 97 521 521 HOH H2O . 
D 4 HOH A 98 522 522 HOH H2O . 
D 4 HOH A 99 523 523 HOH H2O . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTL . . . C 3 17.347 54.051 36.569 1 33.24 ? C1 PTL 352 A 1 
HETATM 2 C C2 PTL . . . C 3 18.402 54.679 37.49 1 35.84 ? C2 PTL 352 A 1 
HETATM 3 C C3 PTL . . . C 3 18.945 53.673 38.477 1 47.2 ? C3 PTL 352 A 1 
HETATM 4 C C4 PTL . . . C 3 19.916 54.369 39.413 1 61.47 ? C4 PTL 352 A 1 
HETATM 5 C C5 PTL . . . C 3 20.15 53.516 40.677 1 61.82 ? C5 PTL 352 A 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#