data_1REM # _model_server_result.job_id eWUi4CTfZjKoKpdg4jybNg _model_server_result.datetime_utc '2024-11-22 08:23:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1rem # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":134}' # _entry.id 1REM # _exptl.entry_id 1REM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description R-1,2-PROPANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1REM _cell.length_a 36.39 _cell.length_b 116.38 _cell.length_c 30.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1REM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 BMA _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG ? 132 NAG 2 n B BMA 2 B 2 BMA ? 131 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 65 A CYS 65 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf4 A SG CYS 77 A CYS 77 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 A OD2 ASP 53 A ASP 53 1_555 D C3 PGR . A PGR 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.489 ? covale ? covale2 D O1 PGR . A PGR 134 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? covale ? covale3 B O4 NAG . B NAG 1 1_555 B C1 BMA . B BMA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.382 ? # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PGR _chem_comp.mon_nstd_flag . _chem_comp.name R-1,2-PROPANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGR sing 294 n n C1 O1 PGR sing 295 n n C1 H11 PGR sing 296 n n C1 H12 PGR sing 297 n n C2 C3 PGR sing 298 n n C2 O2 PGR sing 299 n n C2 H2 PGR sing 300 n n C3 H31 PGR sing 301 n n C3 H32 PGR sing 302 n n C3 H33 PGR sing 303 n n O1 HO1 PGR sing 304 n n O2 HO2 PGR sing 305 n n # _atom_sites.entry_id 1REM _atom_sites.fract_transf_matrix[1][1] 0.02748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.032352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NO3 A 1 133 1 NO3 NO3 . D 4 PGR A 1 134 133 PGR HP3 . E 5 HOH A 1 135 1 HOH HOH . E 5 HOH A 2 136 2 HOH HOH . E 5 HOH A 3 137 3 HOH HOH . E 5 HOH A 4 138 4 HOH HOH . E 5 HOH A 5 139 5 HOH HOH . E 5 HOH A 6 140 6 HOH HOH . E 5 HOH A 7 141 7 HOH HOH . E 5 HOH A 8 142 8 HOH HOH . E 5 HOH A 9 143 9 HOH HOH . E 5 HOH A 10 144 10 HOH HOH . E 5 HOH A 11 145 11 HOH HOH . E 5 HOH A 12 146 12 HOH HOH . E 5 HOH A 13 147 13 HOH HOH . E 5 HOH A 14 148 14 HOH HOH . E 5 HOH A 15 149 15 HOH HOH . E 5 HOH A 16 150 16 HOH HOH . E 5 HOH A 17 151 17 HOH HOH . E 5 HOH A 18 152 18 HOH HOH . E 5 HOH A 19 153 19 HOH HOH . E 5 HOH A 20 154 20 HOH HOH . E 5 HOH A 21 155 21 HOH HOH . E 5 HOH A 22 156 22 HOH HOH . E 5 HOH A 23 157 23 HOH HOH . E 5 HOH A 24 158 24 HOH HOH . E 5 HOH A 25 159 25 HOH HOH . E 5 HOH A 26 160 26 HOH HOH . E 5 HOH A 27 161 27 HOH HOH . E 5 HOH A 28 162 28 HOH HOH . E 5 HOH A 29 163 29 HOH HOH . E 5 HOH A 30 164 30 HOH HOH . E 5 HOH A 31 165 31 HOH HOH . E 5 HOH A 32 166 32 HOH HOH . E 5 HOH A 33 167 33 HOH HOH . E 5 HOH A 34 168 34 HOH HOH . E 5 HOH A 35 169 35 HOH HOH . E 5 HOH A 36 170 36 HOH HOH . E 5 HOH A 37 171 37 HOH HOH . E 5 HOH A 38 172 38 HOH HOH . E 5 HOH A 39 173 39 HOH HOH . E 5 HOH A 40 174 40 HOH HOH . E 5 HOH A 41 175 41 HOH HOH . E 5 HOH A 42 176 42 HOH HOH . E 5 HOH A 43 177 43 HOH HOH . E 5 HOH A 44 178 44 HOH HOH . E 5 HOH A 45 179 45 HOH HOH . E 5 HOH A 46 180 46 HOH HOH . E 5 HOH A 47 181 47 HOH HOH . E 5 HOH A 48 182 48 HOH HOH . E 5 HOH A 49 183 49 HOH HOH . E 5 HOH A 50 184 50 HOH HOH . E 5 HOH A 51 185 51 HOH HOH . E 5 HOH A 52 186 52 HOH HOH . E 5 HOH A 53 187 53 HOH HOH . E 5 HOH A 54 188 54 HOH HOH . E 5 HOH A 55 189 55 HOH HOH . E 5 HOH A 56 190 56 HOH HOH . E 5 HOH A 57 191 57 HOH HOH . E 5 HOH A 58 192 58 HOH HOH . E 5 HOH A 59 193 59 HOH HOH . E 5 HOH A 60 194 60 HOH HOH . E 5 HOH A 61 195 61 HOH HOH . E 5 HOH A 62 196 62 HOH HOH . E 5 HOH A 63 197 63 HOH HOH . E 5 HOH A 64 198 64 HOH HOH . E 5 HOH A 65 199 65 HOH HOH . E 5 HOH A 66 200 66 HOH HOH . E 5 HOH A 67 201 67 HOH HOH . E 5 HOH A 68 202 68 HOH HOH . E 5 HOH A 69 203 69 HOH HOH . E 5 HOH A 70 204 70 HOH HOH . E 5 HOH A 71 205 71 HOH HOH . E 5 HOH A 72 206 72 HOH HOH . E 5 HOH A 73 207 73 HOH HOH . E 5 HOH A 74 208 74 HOH HOH . E 5 HOH A 75 209 75 HOH HOH . E 5 HOH A 76 210 76 HOH HOH . E 5 HOH A 77 211 77 HOH HOH . E 5 HOH A 78 212 78 HOH HOH . E 5 HOH A 79 213 79 HOH HOH . E 5 HOH A 80 214 80 HOH HOH . E 5 HOH A 81 215 81 HOH HOH . E 5 HOH A 82 216 82 HOH HOH . E 5 HOH A 83 217 83 HOH HOH . E 5 HOH A 84 218 84 HOH HOH . E 5 HOH A 85 219 85 HOH HOH . E 5 HOH A 86 220 86 HOH HOH . E 5 HOH A 87 221 87 HOH HOH . E 5 HOH A 88 222 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGR . . . D 4 2.293 25.322 33.605 1 19 ? C1 PGR 134 A 1 HETATM 2 C C2 PGR . . . D 4 3.519 25.422 32.71 1 23.27 ? C2 PGR 134 A 1 HETATM 3 C C3 PGR . . . D 4 4.047 24.017 32.352 1 17.31 ? C3 PGR 134 A 1 HETATM 4 O O1 PGR . . . D 4 2.6 24.449 34.696 1 17.95 ? O1 PGR 134 A 1 HETATM 5 O O2 PGR . . . D 4 3.185 26.134 31.531 1 26.39 ? O2 PGR 134 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 436 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #